Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G32043 Trifolium pratense HOM05D003216 ORTHO05D002268 1.5e-64 249.2 114 100.0
TPR.G27562 Trifolium pratense HOM05D003216 ORTHO05D002268 3.5e-61 238.0 114 95.6
TPR.G17632 Trifolium pratense HOM05D003216 ORTHO05D002268 2.5e-59 231.9 114 93.9
TPR.G16425 Trifolium pratense HOM05D003216 ORTHO05D002268 2.4e-54 215.3 114 90.4
TPR.G40729 Trifolium pratense HOM05D003216 ORTHO05D002268 2.7e-45 185.3 113 75.2
TPR.G30694 Trifolium pratense HOM05D003216 ORTHO05D002268 3.4e-32 141.7 68 94.1
TPR.G38697 Trifolium pratense HOM05D003216 ORTHO05D002268 4.4e-32 141.4 64 93.8
TPR.G28459 Trifolium pratense HOM05D003216 ORTHO05D002268 2.4e-30 135.6 104 57.7
Medtr8g446690 Medicago truncatula HOM05D003216 ORTHO05D002268 5.4e-30 134.4 114 54.4
Medtr2g461120 Medicago truncatula HOM05D003216 ORTHO05D002268 7.8e-29 130.6 115 52.2
Medtr8g017510 Medicago truncatula HOM05D003216 ORTHO05D002268 2.3e-28 129.0 114 52.6
TPR.G40026 Trifolium pratense HOM05D003216 ORTHO05D002268 1.5e-27 126.3 78 71.8
Medtr4g132765 Medicago truncatula HOM05D003216 ORTHO05D002268 1.2e-26 123.2 114 50.0
Medtr1g064700 Medicago truncatula HOM05D003216 ORTHO05D002268 2.8e-26 122.1 114 51.8
Medtr2g061890 Medicago truncatula HOM05D003216 ORTHO05D002268 2.8e-26 122.1 114 49.1
TPR.G38871 Trifolium pratense HOM05D003216 ORTHO05D002268 1.1e-25 120.2 117 48.7
TPR.G24036 Trifolium pratense HOM05D000096 ORTHO05D009933 1.4e-25 119.8 104 52.9
Medtr8g040220 Medicago truncatula HOM05D003216 ORTHO05D002268 1.8e-25 119.4 118 44.1
TPR.G36380 Trifolium pratense HOM05D003216 ORTHO05D002268 3.1e-25 118.6 118 49.2
TPR.G9575 Trifolium pratense HOM05D003216 ORTHO05D009933 3.1e-25 118.6 118 44.9
Medtr6g035400 Medicago truncatula HOM05D003216 ORTHO05D002268 4.0e-25 118.2 114 49.1
Medtr4g113170 Medicago truncatula HOM05D003216 ORTHO05D002268 1.5e-24 116.3 96 52.1
TPR.G20309 Trifolium pratense HOM05D003216 ORTHO05D002268 2.0e-24 115.9 117 49.6
Medtr3g032550 Medicago truncatula HOM05D003216 ORTHO05D002268 2.6e-24 115.5 118 45.8
Medtr6g084230 Medicago truncatula HOM05D003216 ORTHO05D002268 2.6e-24 115.5 114 50.0
TPR.G22805 Trifolium pratense HOM05D003216 ORTHO05D002268 3.4e-24 115.2 97 53.6
Medtr7g004990 Medicago truncatula HOM05D003216 ORTHO05D002268 7.6e-24 114.0 114 48.2
Medtr3g014480 Medicago truncatula HOM05D003216 ORTHO05D002268 9.9e-24 113.6 118 45.8
Medtr8g468040 Medicago truncatula HOM05D003216 ORTHO05D002268 9.9e-24 113.6 114 46.5
TPR.G28022 Trifolium pratense HOM05D003216 ORTHO05D002268 1.7e-23 112.8 117 46.2
TPR.G22718 Trifolium pratense HOM05D003216 ORTHO05D002268 2.2e-23 112.5 117 47.0
TPR.G14425 Trifolium pratense HOM05D003216 ORTHO05D002268 2.9e-23 112.1 117 47.9
Medtr7g006230 Medicago truncatula HOM05D003216 ORTHO05D002268 1.1e-22 110.2 119 45.4
TPR.G31202 Trifolium pratense HOM05D009380 ORTHO05D009933 1.1e-22 110.2 98 51.0
Medtr7g069450 Medicago truncatula HOM05D003216 ORTHO05D002268 1.4e-22 109.8 106 43.4
Medtr7g024793 Medicago truncatula HOM05D003216 ORTHO05D002268 3.2e-22 108.6 85 52.9
Medtr7g029645 Medicago truncatula HOM05D003216 ORTHO05D002268 5.4e-22 107.8 119 45.4
Medtr1g051465 Medicago truncatula HOM05D003216 ORTHO05D002268 7.1e-22 107.5 119 44.5
Medtr3g437080 Medicago truncatula HOM05D003216 ORTHO05D002268 7.1e-22 107.5 80 53.8
TPR.G14065 Trifolium pratense HOM05D003216 ORTHO05D002268 7.1e-22 107.5 121 44.6
Medtr5g062340 Medicago truncatula HOM05D003216 ORTHO05D002268 9.3e-22 107.1 119 42.9
Medtr1g035110 Medicago truncatula HOM05D003216 ORTHO05D002268 2.1e-21 105.9 119 43.7
TPR.G35306 Trifolium pratense HOM05D003216 ORTHO05D002268 2.7e-21 105.5 99 47.5
TPR.G8192 Trifolium pratense HOM05D003216 ORTHO05D002268 4.6e-21 104.8 99 46.5
Medtr0325s0020 Medicago truncatula HOM05D003444 ORTHO05D003963 6.0e-21 104.4 88 50.0
Medtr4g065057 Medicago truncatula HOM05D003216 ORTHO05D002268 6.0e-21 104.4 119 43.7
TPR.G20359 Trifolium pratense HOM05D003216 ORTHO05D002268 7.8e-21 104.0 104 47.1
Medtr8g020437 Medicago truncatula HOM05D003216 ORTHO05D002268 1.7e-20 102.8 119 43.7
Medtr5g018790 Medicago truncatula HOM05D003216 ORTHO05D002268 2.3e-20 102.4 119 42.9
TPR.G14047 Trifolium pratense HOM05D003216 ORTHO05D002268 3.0e-20 102.1 121 43.0
TPR.G17160 Trifolium pratense HOM05D003216 ORTHO05D002268 6.6e-20 100.9 120 42.5
TPR.G22845 Trifolium pratense HOM05D003216 ORTHO05D002268 6.6e-20 100.9 99 43.4
TPR.G40558 Trifolium pratense HOM05D003216 ORTHO05D002268 1.9e-19 99.4 121 42.1
Medtr5g039360 Medicago truncatula HOM05D003216 ORTHO05D002268 2.5e-19 99.0 78 56.4
Medtr5g037560 Medicago truncatula HOM05D003216 ORTHO05D002268 3.3e-19 98.6 81 54.3
Medtr1g016820 Medicago truncatula HOM05D003216 ORTHO05D002268 5.6e-19 97.8 119 42.0
Medtr2g096070 Medicago truncatula HOM05D003216 ORTHO05D002268 5.6e-19 97.8 111 44.1
TPR.G8656 Trifolium pratense HOM05D003216 ORTHO05D002268 7.3e-19 97.4 99 43.4
TPR.G25329 Trifolium pratense HOM05D009380 ORTHO05D009933 1.3e-18 96.7 85 51.8
Medtr2g067680 Medicago truncatula HOM05D003216 ORTHO05D002268 1.4e-17 93.2 108 42.6
Medtr3g087410 Medicago truncatula HOM05D003216 ORTHO05D002268 9.0e-17 90.5 114 43.0
Medtr7g056013 Medicago truncatula HOM05D003216 ORTHO05D002268 2.6e-16 89.0 86 45.3
TPR.G31505 Trifolium pratense HOM05D003216 ORTHO05D002268 5.8e-16 87.8 99 41.4
Medtr4g048540 Medicago truncatula HOM05D003216 ORTHO05D002268 3.8e-15 85.1 81 48.1
TPR.G7282 Trifolium pratense HOM05D003216 ORTHO05D002268 6.4e-15 84.3 59 64.4
Medtr1g111720 Medicago truncatula HOM05D003216 ORTHO05D002268 1.4e-14 83.2 111 37.8
Medtr2g461930 Medicago truncatula HOM05D003216 ORTHO05D002268 1.4e-14 83.2 100 45.0
Medtr1g101180 Medicago truncatula HOM05D003216 ORTHO05D002268 2.4e-14 82.4 118 35.6
TPR.G754 Trifolium pratense HOM05D003216 ORTHO05D002268 2.4e-14 82.4 59 62.7
Medtr8g409330 Medicago truncatula HOM05D003216 ORTHO05D002268 1.2e-13 80.1 119 37.0
Phvul.008G000100 Phaseolus vulgaris HOM05D000593 ORTHO05D000562 2.1e-13 79.3 102 40.2
Medtr2g436740 Medicago truncatula HOM05D003216 ORTHO05D002268 3.5e-13 78.6 54 57.4
Medtr2g101530 Medicago truncatula HOM05D003216 ORTHO05D002268 6.0e-13 77.8 75 46.7
Medtr6g089230 Medicago truncatula HOM05D003216 ORTHO05D004526 6.0e-13 77.8 67 49.3
Medtr8g465330 Medicago truncatula HOM05D003216 ORTHO05D002268 1.0e-12 77.0 98 37.8
Medtr7g095760 Medicago truncatula HOM05D003216 ORTHO05D002268 1.3e-12 76.6 114 36.8
Medtr2g067910 Medicago truncatula HOM05D003216 ORTHO05D002268 3.9e-12 75.1 68 45.6
Medtr5g032220 Medicago truncatula HOM05D000593 ORTHO05D000562 6.7e-12 74.3 96 37.5
Medtr8g463980 Medicago truncatula HOM05D003216 ORTHO05D002268 6.7e-12 74.3 88 39.8
Medtr6g084295 Medicago truncatula HOM05D003216 ORTHO05D002268 1.1e-11 73.6 53 52.8
TWI73G0339 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.9e-11 72.8 96 38.5
Ca_10000_v3 Cicer arietinum L. HOM05D000009 ORTHO05D000008 3.3e-11 72.0 112 36.6
Rhsim01G0176400 Rhododendron simsii HOM05D003216 ORTHO05D002268 7.4e-11 70.9 101 37.6
Rhsim06G0090900 Rhododendron simsii HOM05D003216 ORTHO05D002268 7.4e-11 70.9 101 37.6
Lj6A78T35 Lonicera japonica HOM05D000011 ORTHO05D002639 1.3e-10 70.1 97 34.0
Medtr6g086765 Medicago truncatula HOM05D003216 ORTHO05D002268 1.6e-10 69.7 74 47.3
Medtr8g465250 Medicago truncatula HOM05D003216 ORTHO05D002268 1.6e-10 69.7 58 48.3
TPR.G17165 Trifolium pratense HOM05D003216 ORTHO05D002268 2.8e-10 68.9 76 43.4
Medtr1g024975 Medicago truncatula HOM05D003216 ORTHO05D002268 8.1e-10 67.4 60 48.3
Medtr3g463860 Medicago truncatula HOM05D003216 ORTHO05D002268 8.1e-10 67.4 98 37.8
TWI32G0254 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 2.4e-09 65.9 97 33.0
Ca_11910_v3 Cicer arietinum L. HOM05D003216 ORTHO05D002268 4.0e-09 65.1 111 33.3
Medtr3g044770 Medicago truncatula HOM05D003216 ORTHO05D002268 2.0e-08 62.8 46 60.9
Medtr3g104445 Medicago truncatula HOM05D003216 ORTHO05D002268 2.0e-08 62.8 79 36.7
PSO729G0006 Papaver somniferum HOM05D013875 ORTHO05D002268 3.4e-08 62.0 103 35.9
CSS0013543 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 5.8e-08 61.2 95 34.7
Ca_14497_v3 Cicer arietinum L. HOM05D003216 ORTHO05D002268 9.9e-08 60.5 111 31.5
PSO210G1587 Papaver somniferum HOM05D003216 ORTHO05D002268 2.2e-07 59.3 96 33.3
TPR.G14233 Trifolium pratense HOM05D000096 ORTHO05D000045 4.9e-07 58.2 49 53.1
Medtr7g057780 Medicago truncatula HOM05D003216 ORTHO05D002268 8.4e-07 57.4 44 52.3
RcHm_v2.0_Chr7g0206311 Rosa chinensis HOM05D000593 ORTHO05D000562 8.4e-07 57.4 98 34.7
Medtr4g014760 Medicago truncatula HOM05D003216 ORTHO05D002268 1.1e-06 57.0 58 41.4
CANSAT54G0060 Cannabis sativa HOM05D003216 ORTHO05D002268 2.4e-06 55.8 100 33.0
TPR.G17604 Trifolium pratense HOM05D003216 ORTHO05D002268 2.4e-06 55.8 40 67.5
Aqoxy3G00378 Aquilegia oxysepala HOM05D003216 ORTHO05D002268 3.2e-06 55.5 117 32.5
Medtr4g015450 Medicago truncatula HOM05D003216 ORTHO05D010126 3.2e-06 55.5 46 50.0
Medtr4g088830 Medicago truncatula HOM05D003216 ORTHO05D002268 3.2e-06 55.5 58 46.6
Ca_01383_v3 Cicer arietinum L. HOM05D003216 ORTHO05D002268 5.5e-06 54.7 89 36.0
PSO339G0458 Papaver somniferum HOM05D000593 ORTHO05D002268 5.5e-06 54.7 96 32.3
Atru.chr1.3004 Acer truncatum HOM05D000593 ORTHO05D002268 7.1e-06 54.3 95 31.6


User provided reference genes

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