Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G32017 Trifolium pratense HOM05D007233 ORTHO05D009043 1.2e-71 273.1 137 100.0
Medtr4g056300 Medicago truncatula HOM05D007233 ORTHO05D009043 5.1e-67 257.7 137 92.0
Ca_10766_v3 Cicer arietinum L. HOM05D007233 ORTHO05D009043 3.9e-59 231.5 138 87.0
Lj3g0012043 Lotus japonicus HOM05D007233 ORTHO05D009043 1.7e-54 216.1 136 81.6
Phvul.011G088600 Phaseolus vulgaris HOM05D007233 ORTHO05D009043 1.9e-53 212.6 135 79.3
VMungo1127G1048 Vigna mungo HOM05D007233 ORTHO05D009043 1.9e-53 212.6 135 80.0
Lalb_Chr03g0027851 Lupinus albus HOM05D007233 ORTHO05D009043 7.1e-53 210.7 136 78.7
Thecc.09G294400 Theobroma cacao HOM05D007233 ORTHO05D009043 1.6e-52 209.5 137 76.6
Manes.04G010800 Manihot esculenta HOM05D007233 ORTHO05D009043 1.0e-51 206.8 137 75.9
COL.COLO4_31139 Corchorus olitorius HOM05D007233 ORTHO05D009043 1.1e-50 203.4 135 73.3
Potri.004G190200 Populus trichocarpa HOM05D007233 ORTHO05D009043 1.1e-50 203.4 137 75.9
Glyma.11G190700 Glycine max HOM05D007233 ORTHO05D009043 2.5e-50 202.2 143 74.8
Sabra04G0127900 Salix brachista HOM05D007233 ORTHO05D009043 1.3e-49 199.9 137 73.0
Gohir.D13G228300 Gossypium hirsutum HOM05D007233 ORTHO05D009043 1.6e-49 199.5 137 73.0
QL01p014111 Quercus lobata HOM05D007233 ORTHO05D009043 2.8e-49 198.7 130 73.8
CiPaw.14G104900 Carya illinoinensis HOM05D007233 ORTHO05D009043 6.9e-48 194.1 139 71.9
GSVIVG01031420001 Vitis vinifera HOM05D007233 ORTHO05D009043 1.5e-47 193.0 135 70.4
Haze_23494 Corylus avellana HOM05D007233 ORTHO05D009043 7.7e-47 190.7 142 71.8
ClCG01G013980 Citrullus lanatus HOM05D007233 ORTHO05D009043 1.0e-46 190.3 135 68.9
MSTRG.17742 Avicennia marina HOM05D007233 ORTHO05D009043 1.3e-46 189.9 139 67.6
TAR369G0714 Trochodendron aralioides HOM05D007233 ORTHO05D009043 8.5e-46 187.2 134 69.4
Gohir.A13G223500 Gossypium hirsutum HOM05D007233 ORTHO05D009043 1.1e-45 186.8 137 71.5
PGR119G2223 Punica granatum HOM05D007233 ORTHO05D009043 1.1e-45 186.8 133 71.4
THA.LOC104826400 Tarenaya hassleriana HOM05D007233 ORTHO05D009043 1.1e-45 186.8 137 66.4
CSS0019792 Camellia sinensis var. sinensis HOM05D007233 ORTHO05D009043 1.4e-45 186.4 138 70.3
Aa31LG1G6480 Aethionema arabicum HOM05D007233 ORTHO05D009043 5.5e-45 184.5 139 64.7
Duzib170G0414 Durio zibethinus HOM05D007233 ORTHO05D009043 7.2e-45 184.1 137 69.3
SHI05395 Sapria himalayana HOM05D007233 ORTHO05D009043 7.2e-45 184.1 137 70.8
Ciclev10030019m.g Citrus clementina HOM05D007233 ORTHO05D009043 1.6e-44 183.0 138 67.4
Sed0016181 Sechium edule HOM05D007233 ORTHO05D009043 1.6e-44 183.0 135 65.2
MELO3C004843.2 Cucumis melo HOM05D007233 ORTHO05D009043 2.1e-44 182.6 137 67.2
Carub.0001s0774 Capsella rubella HOM05D007233 ORTHO05D009043 6.1e-44 181.0 136 64.0
SalBow3G1176 Salvia bowleyana HOM05D007233 ORTHO05D009043 7.9e-44 180.6 139 66.9
AT1G08390 Arabidopsis thaliana HOM05D007233 ORTHO05D009043 2.3e-43 179.1 137 62.8
AL1G18800 Arabidopsis lyrata HOM05D007233 ORTHO05D009043 3.0e-43 178.7 136 63.2
Rhsim13G0103700 Rhododendron simsii HOM05D007233 ORTHO05D009043 6.7e-43 177.6 130 68.5
Hund07722 Selenicereus undatus HOM05D007233 ORTHO05D009043 8.8e-43 177.2 135 66.7
CsaV3_1G014310 Cucumis sativus L. HOM05D007233 ORTHO05D009043 1.1e-42 176.8 137 65.0
vmacro03232 Vaccinium macrocarpon HOM05D007233 ORTHO05D009043 4.3e-42 174.9 130 68.5
Migut.N02527 Erythranthe guttata HOM05D007233 ORTHO05D009043 5.7e-42 174.5 139 66.2
A06p05410 Brassica napus HOM05D007233 ORTHO05D009043 7.4e-42 174.1 136 62.5
BraA06t23750Z Brassica rapa HOM05D007233 ORTHO05D009043 7.4e-42 174.1 136 62.5
CARHR008260 Cardamine hirsuta HOM05D007233 ORTHO05D009043 7.4e-42 174.1 139 61.2
EL10Ac9g21047 Beta vulgaris HOM05D007233 ORTHO05D009043 9.7e-42 173.7 140 63.6
BcaB07g34087 Brassica carinata HOM05D007233 ORTHO05D009043 1.7e-41 172.9 136 61.8
C05p06530 Brassica napus HOM05D007233 ORTHO05D009043 1.7e-41 172.9 136 61.8
BolC5t29413H Brassica oleracea HOM05D007233 ORTHO05D009043 1.7e-41 172.9 136 61.8
Sp1g07040 Schrenkiella parvula HOM05D007233 ORTHO05D009043 1.7e-41 172.9 136 63.2
arahy.Tifrunner.gnm1.ann1.5NF9YD Arachis hypogaea HOM05D007233 ORTHO05D009043 2.8e-41 172.2 159 60.4
Eucgr.F03331 Eucalyptus grandis HOM05D007233 ORTHO05D009043 6.3e-41 171.0 144 64.6
AUR62031769 Chenopodium quinoa HOM05D007233 ORTHO05D009043 8.2e-41 170.6 143 62.2
Prupe.6G116400 Prunus persica HOM05D007233 ORTHO05D009043 1.1e-40 170.2 133 63.9
Cc01_g10010 Coffea canephora HOM05D007233 ORTHO05D009043 1.4e-40 169.9 143 62.2
CANSAT78G0435 Cannabis sativa HOM05D007233 ORTHO05D009043 3.1e-40 168.7 139 61.9
unitig_699.g19183 Utricularia gibba HOM05D007233 ORTHO05D009043 3.1e-40 168.7 136 64.0
Peaxi162Scf00150g00710 Petunia axillaris HOM05D007233 ORTHO05D009043 4.1e-40 168.3 139 64.0
Aqoxy1G01014 Aquilegia oxysepala HOM05D007233 ORTHO05D009043 6.9e-40 167.5 134 62.7
Thhalv10009077m.g Eutrema salsugineum HOM05D007233 ORTHO05D009043 6.9e-40 167.5 136 59.6
Nitab4.5_0000442g0180 Nicotiana tabacum HOM05D007233 ORTHO05D009043 9.1e-40 167.2 134 66.4
ATR0665G357 Amborella trichopoda HOM05D007233 ORTHO05D009043 2.6e-39 165.6 132 68.2
FAN25G1956 Fragaria x ananassa HOM05D007233 ORTHO05D009043 2.6e-39 165.6 136 58.8
SGA_v2.0_scaffold93G28323 Striga asiatica HOM05D007233 ORTHO05D009043 2.6e-39 165.6 143 60.1
FvH4_3g30010 Fragaria vesca HOM05D007233 ORTHO05D009043 3.4e-39 165.2 136 58.8
Lsat_1_v5_gn_1_61521 Lactuca sativa HOM05D007233 ORTHO05D009043 4.5e-39 164.9 139 64.7
Solyc11g066690.2 Solanum lycopersicum HOM05D007233 ORTHO05D009043 2.2e-38 162.5 139 60.4
Sopen11g026420 Solanum pennellii HOM05D007233 ORTHO05D009043 2.2e-38 162.5 139 60.4
RcHm_v2.0_Chr5g0055931 Rosa chinensis HOM05D007233 ORTHO05D009043 2.9e-38 162.2 136 58.8
Dinv29405 Davidia involucrata HOM05D007233 ORTHO05D009043 8.5e-38 160.6 170 55.9
FAN21G0394 Fragaria x ananassa HOM05D007233 ORTHO05D009043 1.1e-37 160.2 136 57.4
CAN.G644.46 Capsicum annuum HOM05D007233 ORTHO05D009043 1.4e-37 159.8 139 60.4
Psat0s3169g0040 Pisum sativum HOM05D007233 ORTHO05D009043 1.4e-37 159.8 102 82.4
PGSC0003DMG400000464 Solanum tuberosum HOM05D007233 ORTHO05D009043 1.9e-37 159.5 139 59.0
DCAR_015489 Daucus carota HOM05D007233 ORTHO05D009043 5.5e-37 157.9 138 59.4
HanXRQChr11g0345871 Helianthus annuus HOM05D007233 ORTHO05D009043 7.2e-37 157.5 137 62.8
MD11G1153700 Malus domestica HOM05D007233 ORTHO05D009043 1.0e-35 153.7 133 62.4
Ah.01g016160 Amaranthus hybridus HOM05D007233 ORTHO05D009043 4.4e-34 148.3 146 54.1
MBI04_g22192_MAGBIO Magnolia biondii HOM05D007233 ORTHO05D009043 2.8e-33 145.6 107 69.2
Atru.chr3.3421 Acer truncatum HOM05D007233 ORTHO05D009043 1.1e-32 143.7 99 72.7
ECA248G0451 Erigeron canadensis HOM05D007233 ORTHO05D009043 2.4e-32 142.5 139 58.3
PSO063G0378 Papaver somniferum HOM05D007233 ORTHO05D009043 2.0e-31 139.4 134 57.5
PSO339G4613 Papaver somniferum HOM05D007233 ORTHO05D009043 4.5e-31 138.3 134 56.7
Gorai.013G259000 Gossypium raimondii HOM05D007233 ORTHO05D009043 1.0e-30 137.1 115 62.6
ClCG08G000500 Citrullus lanatus HOM05D007233 ORTHO05D009043 2.1e-28 129.4 114 59.6
Zm00001eb053200 Zea mays HOM05D007233 ORTHO05D009043 2.1e-28 129.4 142 52.8
Cpa.g.sc47.40 Carica papaya HOM05D007233 ORTHO05D009043 2.7e-28 129.0 101 66.3
Haze_23472 Corylus avellana HOM05D007233 ORTHO05D009043 8.0e-28 127.5 135 55.6
Cfa010203 Carpinus fangiana HOM05D007233 ORTHO05D009043 3.3e-26 122.1 102 66.7
Os03g0684300 Oryza sativa ssp. japonica HOM05D007233 ORTHO05D009043 3.3e-26 122.1 140 48.6
TWI31G0123 Tripterygium wilfordii HOM05D007233 ORTHO05D009043 7.4e-26 120.9 118 54.2
Pp3c26_4940 Physcomitrium patens HOM05D007233 ORTHO05D009043 1.3e-25 120.2 137 48.9
Pp3c26_4950 Physcomitrium patens HOM05D007233 ORTHO05D009043 1.3e-25 120.2 137 48.9
Haze_23491 Corylus avellana HOM05D007233 ORTHO05D009043 1.7e-25 119.8 149 49.7
Cfa020420 Carpinus fangiana HOM05D007233 ORTHO05D009043 6.3e-25 117.9 96 64.6
Haze_23479 Corylus avellana HOM05D007233 ORTHO05D009043 7.0e-24 114.4 95 67.4
arahy.Tifrunner.gnm1.ann1.9UEW9D Arachis hypogaea HOM05D007233 ORTHO05D009043 3.8e-22 108.6 123 51.2
Nn6g35132 Nelumbo nucifera HOM05D007233 ORTHO05D009043 2.1e-20 102.8 84 59.5
Mapoly0016s0182 Marchantia polymorpha HOM05D007233 ORTHO05D009043 4.0e-19 98.6 132 41.7
AagrBONN_evm.TU.Sc2ySwM_344.3909 Anthoceros agrestis HOM05D007233 ORTHO05D009043 1.1e-16 90.5 106 43.4
Duzib168G0428 Durio zibethinus HOM05D007233 ORTHO05D009043 1.8e-16 89.7 102 49.0
Oeu035529.3 Olea europaea HOM05D007233 ORTHO05D009043 1.8e-16 89.7 79 58.2
Sc12g0003860 Simmondsia chinensis HOM05D007233 ORTHO05D009043 9.1e-16 87.4 80 58.8
CDE02G1642 Ceratophyllum demersum HOM05D007233 ORTHO05D009043 5.9e-15 84.7 81 54.3
Haze_23488 Corylus avellana HOM05D007233 ORTHO05D009043 4.2e-13 78.6 86 53.5
arahy.Tifrunner.gnm1.ann1.3ZRX2Z Arachis hypogaea HOM05D007233 ORTHO05D009043 1.5e-10 70.1 66 57.6
Potri.002G256001 Populus trichocarpa HOM05D007233 ORTHO05D009043 3.1e-08 62.4 40 75.0
Oeu000616.2 Olea europaea HOM05D007233 ORTHO05D009043 9.1e-08 60.8 73 52.1
Actinidia14340 Actinidia chinensis HOM05D007233 ORTHO05D009043 1.6e-07 60.1 57 54.4


User provided reference genes

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