Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G32014 Trifolium pratense HOM05D003173 ORTHO05D003546 5.5e-81 304.3 160 100.0
Medtr8g074760 Medicago truncatula HOM05D003173 ORTHO05D003546 6.2e-56 221.1 167 75.4
Lj4g0000766 Lotus japonicus HOM05D003173 ORTHO05D003546 1.7e-37 159.8 163 58.9
Lalb_Chr05g0229691 Lupinus albus HOM05D003173 ORTHO05D003546 2.4e-36 156.0 178 56.2
arahy.Tifrunner.gnm1.ann1.L00MPK Arachis hypogaea HOM05D003173 ORTHO05D003546 6.0e-35 151.4 178 54.5
Psat2g151840 Pisum sativum HOM05D003173 ORTHO05D003546 9.6e-33 144.1 172 57.6
Glyma.11G081300 Glycine max HOM05D003173 ORTHO05D003546 2.1e-32 142.9 162 58.6
TPR.G25094 Trifolium pratense HOM05D003173 ORTHO05D003546 2.1e-32 142.9 166 57.8
Ca_24945_v3 Cicer arietinum L. HOM05D000001 ORTHO05D000003 3.6e-32 142.1 160 60.0
Glyma.02G043800 Glycine max HOM05D003173 ORTHO05D003546 5.3e-31 138.3 167 53.3
VMungo1215G2410 Vigna mungo HOM05D003173 ORTHO05D003546 2.6e-30 136.0 169 54.4
Medtr5g023030 Medicago truncatula HOM05D003173 ORTHO05D003546 1.9e-28 129.8 167 52.7
Lj2g0017226 Lotus japonicus HOM05D003173 ORTHO05D003546 2.1e-27 126.3 177 53.1
Phvul.003G267350 Phaseolus vulgaris HOM05D003173 ORTHO05D003546 7.9e-27 124.4 164 49.4
Phvul.002G104300 Phaseolus vulgaris HOM05D003173 ORTHO05D003546 3.0e-26 122.5 169 50.9
Lj4g0015450 Lotus japonicus HOM05D003173 ORTHO05D003546 1.5e-25 120.2 173 52.0
VMungo0251G0852 Vigna mungo HOM05D003173 ORTHO05D003546 1.4e-23 113.6 171 46.8
Thecc.08G051800 Theobroma cacao HOM05D003173 ORTHO05D003546 1.9e-17 93.2 176 42.0
COL.COLO4_26083 Corchorus olitorius HOM05D003173 ORTHO05D003546 4.3e-17 92.0 167 41.9
Cfa007032 Carpinus fangiana HOM05D003173 ORTHO05D003546 2.8e-16 89.4 173 41.0
Duzib093G0730 Durio zibethinus HOM05D003173 ORTHO05D003546 1.8e-15 86.7 178 39.9
QL02p012938 Quercus lobata HOM05D003173 ORTHO05D003546 1.8e-15 86.7 191 37.7
Duzib264G0532 Durio zibethinus HOM05D003173 ORTHO05D003546 4.0e-15 85.5 160 43.8
COL.COLO4_22498 Corchorus olitorius HOM05D003173 ORTHO05D003546 1.5e-14 83.6 162 42.0
Gohir.D05G185800 Gossypium hirsutum HOM05D003173 ORTHO05D003546 2.6e-14 82.8 171 40.9
Gorai.009G191200 Gossypium raimondii HOM05D003173 ORTHO05D003546 2.6e-14 82.8 171 40.9
MBI09_g01020_MAGBIO Magnolia biondii HOM05D003173 ORTHO05D003546 3.4e-14 82.4 171 38.0
Gohir.A05G182800 Gossypium hirsutum HOM05D003173 ORTHO05D003546 1.3e-13 80.5 171 40.4
Glyma.14G222400 Glycine max HOM05D003173 ORTHO05D003546 1.7e-13 80.1 163 36.8
TAR628G1607 Trochodendron aralioides HOM05D003173 ORTHO05D003546 2.2e-13 79.7 169 37.9
ClCG05G015410 Citrullus lanatus HOM05D003173 ORTHO05D003546 2.9e-13 79.3 163 38.7
Manes.05G142500 Manihot esculenta HOM05D003173 ORTHO05D003546 3.8e-13 79.0 177 36.2
Thecc.01G011100 Theobroma cacao HOM05D003173 ORTHO05D003546 8.4e-13 77.8 155 41.3
Eucgr.J02492 Eucalyptus grandis HOM05D003173 ORTHO05D003546 1.4e-12 77.0 169 36.7
CiPaw.08G069200 Carya illinoinensis HOM05D003173 ORTHO05D003546 1.9e-12 76.6 185 38.9
Haze_22703 Corylus avellana HOM05D003173 ORTHO05D003546 3.2e-12 75.9 186 36.6
Dinv39556 Davidia involucrata HOM05D003173 ORTHO05D003546 3.2e-12 75.9 173 38.2
Manes.02G110500 Manihot esculenta HOM05D003173 ORTHO05D003546 3.2e-12 75.9 162 38.3
TAR381G1677 Trochodendron aralioides HOM05D003173 ORTHO05D003546 3.2e-12 75.9 173 37.6
TAR376G0945 Trochodendron aralioides HOM05D003173 ORTHO05D003546 4.2e-12 75.5 174 33.9
Actinidia15462 Actinidia chinensis HOM05D003173 ORTHO05D003546 5.5e-12 75.1 173 37.6
CiPaw.07G143600 Carya illinoinensis HOM05D003173 ORTHO05D003546 5.5e-12 75.1 188 36.7
CiPaw.07G063500 Carya illinoinensis HOM05D003173 ORTHO05D003546 7.1e-12 74.7 186 36.6
Oeu026120.1 Olea europaea HOM05D003173 ORTHO05D003546 9.3e-12 74.3 155 36.8
Rhsim06G0012200 Rhododendron simsii HOM05D003173 ORTHO05D003546 9.3e-12 74.3 173 38.2
Phvul.009G019900 Phaseolus vulgaris HOM05D003173 ORTHO05D003546 1.2e-11 73.9 189 33.3
VMungo1309G1265 Vigna mungo HOM05D003173 ORTHO05D003546 1.2e-11 73.9 187 35.3
Actinidia37954 Actinidia chinensis HOM05D003173 ORTHO05D003546 1.6e-11 73.6 144 39.6
Duzib116G0616 Durio zibethinus HOM05D003173 ORTHO05D003546 2.1e-11 73.2 181 34.8
Lalb_Chr23g0265991 Lupinus albus HOM05D003173 ORTHO05D003546 2.1e-11 73.2 164 36.6
Cpa.g.sc26.264 Carica papaya HOM05D003173 ORTHO05D003546 2.7e-11 72.8 174 35.1
Cfa014008 Carpinus fangiana HOM05D003173 ORTHO05D003546 3.5e-11 72.4 184 35.9
Haze_03701 Corylus avellana HOM05D003173 ORTHO05D003546 3.5e-11 72.4 96 51.0
TWI73G0798 Tripterygium wilfordii HOM05D003173 ORTHO05D003546 3.5e-11 72.4 160 37.5
PGR102G2057 Punica granatum HOM05D003173 ORTHO05D003546 6.1e-11 71.6 165 37.0
Actinidia29769 Actinidia chinensis HOM05D000228 ORTHO05D001545 7.9e-11 71.2 156 38.5
MELO3C003727.2 Cucumis melo HOM05D003173 ORTHO05D003546 7.9e-11 71.2 168 38.1
CSS0028811 Camellia sinensis var. sinensis HOM05D003173 ORTHO05D003546 1.0e-10 70.9 172 38.4
Manes.18G009300 Manihot esculenta HOM05D003173 ORTHO05D003546 1.3e-10 70.5 182 35.7
Gohir.D12G058500 Gossypium hirsutum HOM05D003173 ORTHO05D003546 2.3e-10 69.7 151 40.4
Peaxi162Scf00744g00026 Petunia axillaris HOM05D003173 ORTHO05D003546 3.0e-10 69.3 170 40.6
Phvul.001G002200 Phaseolus vulgaris HOM05D003173 ORTHO05D003546 3.0e-10 69.3 174 35.6
CSS0021479 Camellia sinensis var. sinensis HOM05D003173 ORTHO05D003546 3.9e-10 68.9 172 37.8
FAN19G2722 Fragaria x ananassa HOM05D003173 ORTHO05D003546 3.9e-10 68.9 174 35.6
Gohir.D05G257500 Gossypium hirsutum HOM05D003173 ORTHO05D003546 5.1e-10 68.6 169 36.1
Gorai.008G061700 Gossypium raimondii HOM05D003173 ORTHO05D003546 5.1e-10 68.6 151 39.7
Gorai.009G268900 Gossypium raimondii HOM05D003173 ORTHO05D003546 5.1e-10 68.6 170 36.5
Aqoxy6G01958 Aquilegia oxysepala HOM05D003173 ORTHO05D003546 6.7e-10 68.2 181 35.9
Gohir.A05G255800 Gossypium hirsutum HOM05D003173 ORTHO05D003546 6.7e-10 68.2 169 35.5
Glyma.17G261300 Glycine max HOM05D003173 ORTHO05D003546 8.7e-10 67.8 155 36.1
Glyma.06G020800 Glycine max HOM05D003173 ORTHO05D003546 1.1e-09 67.4 185 33.5
VMungo0647G1822 Vigna mungo HOM05D003173 ORTHO05D003546 1.1e-09 67.4 168 35.1
CSS0006148 Camellia sinensis var. sinensis HOM05D003173 ORTHO05D003546 1.5e-09 67.0 173 35.3
arahy.Tifrunner.gnm1.ann1.YK013F Arachis hypogaea HOM05D003173 ORTHO05D003546 1.9e-09 66.6 179 33.5
FvH4_1g11060 Fragaria vesca HOM05D003173 ORTHO05D003546 1.9e-09 66.6 174 35.6
Psat5g012200 Pisum sativum HOM05D003173 ORTHO05D003546 1.9e-09 66.6 156 35.3
DCAR_016740 Daucus carota HOM05D000228 ORTHO05D001545 2.5e-09 66.2 212 31.1
FAN28G2348 Fragaria x ananassa HOM05D003173 ORTHO05D003546 2.5e-09 66.2 173 35.3
GSVIVG01008738001 Vitis vinifera HOM05D003173 ORTHO05D003546 3.3e-09 65.9 157 36.3
arahy.Tifrunner.gnm1.ann1.S3QWAM Arachis hypogaea HOM05D003173 ORTHO05D003546 4.3e-09 65.5 177 31.6
PSO541G5041 Papaver somniferum HOM05D003173 ORTHO05D003546 4.3e-09 65.5 187 39.0
Peaxi162Scf00174g00083 Petunia axillaris HOM05D003173 ORTHO05D003546 4.3e-09 65.5 170 40.0
Ciclev10027470m.g Citrus clementina HOM05D003173 ORTHO05D003546 7.4e-09 64.7 167 36.5
Gohir.A12G058500 Gossypium hirsutum HOM05D003173 ORTHO05D003546 7.4e-09 64.7 164 36.6
Nn6g31907 Nelumbo nucifera HOM05D003173 ORTHO05D003546 9.7e-09 64.3 184 32.1
Glyma.04G020700 Glycine max HOM05D003173 ORTHO05D003546 1.3e-08 63.9 178 32.6
Medtr3g114750 Medicago truncatula HOM05D003173 ORTHO05D003546 1.3e-08 63.9 177 33.9
Potri.005G107500 Populus trichocarpa HOM05D003173 ORTHO05D003546 1.3e-08 63.9 151 37.7
PGR031G0086 Punica granatum HOM05D003173 ORTHO05D003546 1.3e-08 63.9 184 35.3
CsaV3_3G046130 Cucumis sativus L. HOM05D003173 ORTHO05D003546 1.6e-08 63.5 158 38.0
TWI12G1263 Tripterygium wilfordii HOM05D003173 ORTHO05D003546 2.8e-08 62.8 174 36.8
PGSC0003DMG400009955 Solanum tuberosum HOM05D003173 ORTHO05D003546 3.7e-08 62.4 162 35.8
CDE05G3154 Ceratophyllum demersum HOM05D001535 ORTHO05D003710 6.3e-08 61.6 161 36.6
Psat6g001080 Pisum sativum HOM05D003173 ORTHO05D003546 8.2e-08 61.2 180 33.3
Sopen04g035610 Solanum pennellii HOM05D003173 ORTHO05D003546 1.1e-07 60.8 158 35.4
Nitab4.5_0003030g0080 Nicotiana tabacum HOM05D003173 ORTHO05D003546 1.4e-07 60.5 171 36.3
Lalb_Chr08g0246301 Lupinus albus HOM05D003173 ORTHO05D003546 1.8e-07 60.1 111 36.9
Potri.002G016500 Populus trichocarpa HOM05D003173 ORTHO05D003546 1.8e-07 60.1 169 36.1
TPR.G38194 Trifolium pratense HOM05D003173 ORTHO05D003546 1.8e-07 60.1 169 34.9
EL10Ac1g02082 Beta vulgaris HOM05D003173 ORTHO05D003546 2.4e-07 59.7 206 32.5
FvH4_2g37950 Fragaria vesca HOM05D003173 ORTHO05D003546 2.4e-07 59.7 184 33.7
Lsat_1_v5_gn_2_6961 Lactuca sativa HOM05D003173 ORTHO05D003546 2.4e-07 59.7 208 32.7
Solyc04g081960.1 Solanum lycopersicum HOM05D003173 ORTHO05D003546 2.4e-07 59.7 155 34.2
Cc10_g01130 Coffea canephora HOM05D003173 ORTHO05D003546 3.1e-07 59.3 188 32.4
Lsat_1_v5_gn_8_29221 Lactuca sativa HOM05D003173 ORTHO05D003546 3.1e-07 59.3 206 32.5
Prupe.7G175300 Prunus persica HOM05D003173 ORTHO05D003546 3.1e-07 59.3 180 35.0
TWI56G0288 Tripterygium wilfordii HOM05D003173 ORTHO05D003546 3.1e-07 59.3 176 34.7
FAN27G2702 Fragaria x ananassa HOM05D003173 ORTHO05D003546 4.1e-07 58.9 184 34.2
Nn5g30846 Nelumbo nucifera HOM05D003173 ORTHO05D003546 4.1e-07 58.9 179 31.8
Oeu051144.1 Olea europaea HOM05D003173 ORTHO05D003546 4.1e-07 58.9 166 34.9
SalBow7G1496 Salvia bowleyana HOM05D003173 ORTHO05D003546 4.1e-07 58.9 172 34.9
Migut.N03186 Erythranthe guttata HOM05D003173 ORTHO05D003546 5.3e-07 58.5 189 33.9
FAN20G0850 Fragaria x ananassa HOM05D003173 ORTHO05D003546 5.3e-07 58.5 184 34.2
Medtr1g026110 Medicago truncatula HOM05D003173 ORTHO05D003546 6.9e-07 58.2 168 31.0
Prupe.1G359400 Prunus persica HOM05D003173 ORTHO05D003546 9.0e-07 57.8 189 34.4
FAN15G3480 Fragaria x ananassa HOM05D003173 ORTHO05D003546 1.2e-06 57.4 184 34.2
Ca_13485_v3 Cicer arietinum L. HOM05D003173 ORTHO05D003546 1.5e-06 57.0 170 30.6
RcHm_v2.0_Chr6g0303671 Rosa chinensis HOM05D003173 ORTHO05D003546 1.5e-06 57.0 180 33.3
vmacro04379 Vaccinium macrocarpon HOM05D003173 ORTHO05D003546 1.5e-06 57.0 178 33.1
Atru.chr13.216 Acer truncatum HOM05D003173 ORTHO05D003546 2.6e-06 56.2 206 31.1
DCAR_009512 Daucus carota HOM05D003173 ORTHO05D003546 2.6e-06 56.2 77 49.4
Migut.C00894 Erythranthe guttata HOM05D003173 ORTHO05D003546 2.6e-06 56.2 168 30.4
Sabra05G0189700 Salix brachista HOM05D003173 ORTHO05D003546 2.6e-06 56.2 176 35.2
BolC2t09356H Brassica oleracea HOM05D003173 ORTHO05D003546 3.4e-06 55.8 173 32.9
Carub.0001s1981 Capsella rubella HOM05D003173 ORTHO05D003546 3.4e-06 55.8 181 35.4
C02p33480 Brassica napus HOM05D003173 ORTHO05D003546 4.5e-06 55.5 173 32.4
Hma1.2p1_1598F.1_g292960 Hydrangea macrophylla HOM05D003173 ORTHO05D003546 4.5e-06 55.5 175 32.0
Lalb_Chr19g0131611 Lupinus albus HOM05D003173 ORTHO05D003546 5.9e-06 55.1 212 26.9
BcaC03g15643 Brassica carinata HOM05D003173 ORTHO05D003546 7.7e-06 54.7 173 32.4
CANSAT25G0622 Cannabis sativa HOM05D003173 ORTHO05D003546 7.7e-06 54.7 154 33.1
A02p20410 Brassica napus HOM05D003173 ORTHO05D003546 1.0e-05 54.3 172 32.0
A07p41630 Brassica napus HOM05D003173 ORTHO05D003546 1.0e-05 54.3 180 32.8
BolC6t40040H Brassica oleracea HOM05D003173 ORTHO05D003546 1.0e-05 54.3 180 32.8
CARHR069610 Cardamine hirsuta HOM05D003173 ORTHO05D003546 1.0e-05 54.3 177 32.8


User provided reference genes

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