Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G31833 Trifolium pratense HOM05D017730 ORTHO05D411239 3.5e-192 674.9 356 100.0
TPR.G8613 Trifolium pratense HOM05D000026 ORTHO05D001292 1.8e-18 97.8 248 28.6
Medtr3g007870 Medicago truncatula HOM05D000026 ORTHO05D001292 1.6e-16 91.3 252 30.2
Psat2g007240 Pisum sativum HOM05D000026 ORTHO05D001292 8.1e-16 89.0 252 29.0
Medtr5g095970 Medicago truncatula HOM05D000026 ORTHO05D001292 1.8e-15 87.8 252 29.8
Ca_06398_v3 Cicer arietinum L. HOM05D000026 ORTHO05D001292 5.8e-14 82.8 245 28.2
ECA233G3237 Erigeron canadensis HOM05D000026 ORTHO05D001292 1.4e-12 78.2 246 30.5
COL.COLO4_09838 Corchorus olitorius HOM05D000026 ORTHO05D001292 2.5e-12 77.4 191 32.5
PGR083G0263 Punica granatum HOM05D000026 ORTHO05D001292 2.1e-11 74.3 192 30.7
Thecc.07G013100 Theobroma cacao HOM05D000026 ORTHO05D001292 7.9e-11 72.4 193 31.6
TWI53G0857 Tripterygium wilfordii HOM05D002217 ORTHO05D002093 1.8e-10 71.2 195 30.8
GSVIVG01014693001 Vitis vinifera HOM05D000026 ORTHO05D001292 1.8e-10 71.2 177 32.2
Aqoxy4G02293 Aquilegia oxysepala HOM05D000026 ORTHO05D001292 5.1e-10 69.7 179 31.3
ECA233G4273 Erigeron canadensis HOM05D000026 ORTHO05D002093 5.1e-10 69.7 252 25.8
Lsat_1_v5_gn_6_98801 Lactuca sativa HOM05D000026 ORTHO05D001292 6.7e-10 69.3 178 31.5
Oeu014363.1 Olea europaea HOM05D000026 ORTHO05D001292 6.7e-10 69.3 175 31.4
Oeu046936.1 Olea europaea HOM05D000026 ORTHO05D001292 6.7e-10 69.3 175 31.4
PSO541G4725 Papaver somniferum HOM05D000026 ORTHO05D001292 6.7e-10 69.3 179 29.6
PSO675G1833 Papaver somniferum HOM05D000026 ORTHO05D001292 6.7e-10 69.3 179 30.2
Hma1.2p1_1402F.1_g281080 Hydrangea macrophylla HOM05D000026 ORTHO05D001292 8.7e-10 68.9 181 32.0
TPR.G14388 Trifolium pratense HOM05D017730 ORTHO05D026064 1.1e-09 68.6 56 62.5
THA.LOC104817706 Tarenaya hassleriana HOM05D000026 ORTHO05D001292 1.5e-09 68.2 195 30.3
Medtr3g460810 Medicago truncatula HOM05D000026 ORTHO05D001292 4.3e-09 66.6 175 30.9
BcaC04g20198 Brassica carinata HOM05D000026 ORTHO05D001292 7.4e-09 65.9 181 29.3
C09p46760 Brassica napus HOM05D000026 ORTHO05D001292 7.4e-09 65.9 181 29.3
BolC9t57527H Brassica oleracea HOM05D000026 ORTHO05D001292 7.4e-09 65.9 181 29.3
Eucgr.F02045 Eucalyptus grandis HOM05D000026 ORTHO05D001292 9.6e-09 65.5 192 30.7
RcHm_v2.0_Chr5g0077031 Rosa chinensis HOM05D000026 ORTHO05D001292 9.6e-09 65.5 177 31.1
BraA10t43398Z Brassica rapa HOM05D000026 ORTHO05D001292 1.3e-08 65.1 181 29.3
A10p13040 Brassica napus HOM05D000026 ORTHO05D001292 1.6e-08 64.7 181 28.7
SGA_v2.0_scaffold42G15983 Striga asiatica HOM05D000026 ORTHO05D001292 1.6e-08 64.7 179 27.9
QL08p004008 Quercus lobata HOM05D000026 ORTHO05D001292 3.7e-08 63.5 204 31.9
Rhsim04G0012400 Rhododendron simsii HOM05D000026 ORTHO05D001292 4.8e-08 63.2 256 28.1
MSTRG.13021 Avicennia marina HOM05D000026 ORTHO05D001292 8.2e-08 62.4 180 28.9
TWI38G0371 Tripterygium wilfordii HOM05D000026 ORTHO05D001292 8.2e-08 62.4 195 28.2
BcaB08g35943 Brassica carinata HOM05D000026 ORTHO05D001292 1.1e-07 62.0 184 28.8
Ca_05535_v3 Cicer arietinum L. HOM05D000026 ORTHO05D009413 1.1e-07 62.0 186 29.0
Migut.H01754 Erythranthe guttata HOM05D000026 ORTHO05D001292 1.1e-07 62.0 180 28.9
Thhalv10012869m.g Eutrema salsugineum HOM05D000026 ORTHO05D001292 1.1e-07 62.0 182 28.6
HanXRQChr03g0074001 Helianthus annuus HOM05D000026 ORTHO05D001292 1.4e-07 61.6 178 29.8
Cfa020187 Carpinus fangiana HOM05D000026 ORTHO05D001292 1.8e-07 61.2 195 31.3
AL8G31390 Arabidopsis lyrata HOM05D000026 ORTHO05D001292 2.4e-07 60.8 183 27.3
CSS0011331 Camellia sinensis var. sinensis HOM05D000026 ORTHO05D001292 3.1e-07 60.5 179 27.9
Carub.0008s1618 Capsella rubella HOM05D000026 ORTHO05D001292 3.1e-07 60.5 183 26.8
Cpa.g.sc12.115 Carica papaya HOM05D000026 ORTHO05D001292 3.1e-07 60.5 193 30.1
vmacro09648 Vaccinium macrocarpon HOM05D000026 ORTHO05D001292 3.1e-07 60.5 177 28.8
HanXRQChr05g0161421 Helianthus annuus HOM05D000026 ORTHO05D001292 4.1e-07 60.1 232 25.4
Hma1.2p1_2829F.1_g329170 Hydrangea macrophylla HOM05D000026 ORTHO05D001292 4.1e-07 60.1 181 29.3
Lj8C179G7 Lonicera japonica HOM05D000026 ORTHO05D001292 4.1e-07 60.1 189 30.2
SGA_v2.0_scaffold452G51854 Striga asiatica HOM05D000026 ORTHO05D001292 4.1e-07 60.1 190 27.9
CARHR269200 Cardamine hirsuta HOM05D000026 ORTHO05D001292 5.3e-07 59.7 184 27.7
AT5G55830 Arabidopsis thaliana HOM05D000026 ORTHO05D001292 6.9e-07 59.3 183 26.8
Haze_09830 Corylus avellana HOM05D000026 ORTHO05D001292 6.9e-07 59.3 178 30.3
HanXRQChr02g0037441 Helianthus annuus HOM05D000026 ORTHO05D001292 6.9e-07 59.3 177 27.7
Manes.18G089500 Manihot esculenta HOM05D000026 ORTHO05D001292 6.9e-07 59.3 177 28.8
SHI26510 Sapria himalayana HOM05D000026 ORTHO05D001292 6.9e-07 59.3 176 27.8
Lsat_1_v5_gn_1_8741 Lactuca sativa HOM05D000026 ORTHO05D001292 9.0e-07 58.9 181 27.6
Dinv41106 Davidia involucrata HOM05D001639 ORTHO05D008274 1.2e-06 58.5 180 28.9
Medtr6g461770 Medicago truncatula HOM05D000026 ORTHO05D266497 1.2e-06 58.5 165 27.3
Oeu049403.1 Olea europaea HOM05D000026 ORTHO05D001292 1.2e-06 58.5 245 26.9
Psat5g166320 Pisum sativum HOM05D000026 ORTHO05D001292 1.5e-06 58.2 77 37.7
SEGI_12259 Sequoiadendron giganteum HOM05D000026 ORTHO05D001292 1.5e-06 58.2 191 28.8
MD03G1026600 Malus domestica HOM05D000026 ORTHO05D001292 2.0e-06 57.8 239 27.2
Mapoly1887s0001 Marchantia polymorpha HOM05D000026 ORTHO05D001292 3.4e-06 57.0 184 27.7
MELO3C033530.2 Cucumis melo HOM05D000026 ORTHO05D000094 4.5e-06 56.6 202 26.2
CsaV3_3G034690 Cucumis sativus L. HOM05D000026 ORTHO05D000094 4.5e-06 56.6 198 26.8
Glyma.02G221900 Glycine max HOM05D000026 ORTHO05D009413 4.5e-06 56.6 189 25.4
ATR0314G040 Amborella trichopoda HOM05D000026 ORTHO05D001292 5.9e-06 56.2 171 25.7
MSTRG.14488 Avicennia marina HOM05D000026 ORTHO05D001292 5.9e-06 56.2 259 26.3
CSS0010602 Camellia sinensis var. sinensis HOM05D000026 ORTHO05D001292 5.9e-06 56.2 175 29.7
ECA240G1707 Erigeron canadensis HOM05D000026 ORTHO05D000127 1.0e-05 55.5 181 33.1
Manes.02G129050 Manihot esculenta HOM05D000026 ORTHO05D000094 1.0e-05 55.5 246 26.4
QL03p032996 Quercus lobata HOM05D000026 ORTHO05D000127 1.0e-05 55.5 180 31.1
TPR.G5838 Trifolium pratense HOM05D000026 ORTHO05D009413 1.0e-05 55.5 191 26.2
VMungo0647G0956 Vigna mungo HOM05D000026 ORTHO05D009413 1.0e-05 55.5 187 25.1


User provided reference genes

Program Settings