Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G31812 Trifolium pratense HOM05D006743 ORTHO05D008518 2.4e-190 668.7 347 100.0
Medtr8g055880 Medicago truncatula HOM05D006743 ORTHO05D008518 1.3e-164 583.2 327 93.0
Ca_24218_v3 Cicer arietinum L. HOM05D006743 ORTHO05D008518 2.5e-163 578.9 329 92.4
Psat4g134120 Pisum sativum HOM05D006743 ORTHO05D008518 1.6e-162 576.2 327 92.0
Lalb_Chr16g0385831 Lupinus albus HOM05D006743 ORTHO05D008518 8.7e-148 527.3 327 83.2
Glyma.08G300451 Glycine max HOM05D006743 ORTHO05D008518 1.1e-147 526.9 327 84.1
Glyma.18G120051 Glycine max HOM05D006743 ORTHO05D008518 1.1e-147 526.9 327 84.4
VMungo0251G3125 Vigna mungo HOM05D006743 ORTHO05D008518 1.9e-147 526.2 330 82.4
Lj4g0006351 Lotus japonicus HOM05D006743 ORTHO05D008518 1.3e-146 523.5 314 86.3
Phvul.003G049600 Phaseolus vulgaris HOM05D006743 ORTHO05D008518 9.0e-145 517.3 304 86.5
arahy.Tifrunner.gnm1.ann1.0ELP1Z Arachis hypogaea HOM05D006743 ORTHO05D008518 1.3e-143 513.5 327 82.3
arahy.Tifrunner.gnm1.ann1.MT78EL Arachis hypogaea HOM05D006743 ORTHO05D008518 2.9e-143 512.3 327 82.0
MD16G1074200 Malus domestica HOM05D006743 ORTHO05D008518 6.5e-135 484.6 327 76.1
CANSAT80G2808 Cannabis sativa HOM05D006743 ORTHO05D008518 7.9e-133 477.6 322 76.1
Haze_12021 Corylus avellana HOM05D006743 ORTHO05D008518 5.7e-131 471.5 319 74.3
Gohir.A12G165400 Gossypium hirsutum HOM05D006743 ORTHO05D008518 5.7e-131 471.5 327 74.9
CiPaw.06G083800 Carya illinoinensis HOM05D006743 ORTHO05D008518 1.7e-130 469.9 327 74.6
Atru.chr11.1802 Acer truncatum HOM05D006743 ORTHO05D008518 8.2e-130 467.6 327 74.0
HanXRQChr12g0362551 Helianthus annuus HOM05D006743 ORTHO05D008518 1.1e-129 467.2 327 74.3
PGR119G0901 Punica granatum HOM05D006743 ORTHO05D008518 1.1e-129 467.2 327 72.8
Cpa.g.sc128.13 Carica papaya HOM05D006743 ORTHO05D008518 3.1e-129 465.7 319 74.9
TWI12G0418 Tripterygium wilfordii HOM05D006743 ORTHO05D008518 2.0e-128 463.0 321 71.3
Gohir.D12G168500 Gossypium hirsutum HOM05D006743 ORTHO05D008518 4.5e-128 461.8 327 73.4
Dinv16636 Davidia involucrata HOM05D006743 ORTHO05D008518 1.3e-127 460.3 327 73.4
THA.LOC104805154 Tarenaya hassleriana HOM05D006743 ORTHO05D008518 1.7e-127 459.9 326 72.4
Potri.013G124050 Populus trichocarpa HOM05D006743 ORTHO05D008518 1.1e-126 457.2 327 71.9
FvH4_4g31470 Fragaria vesca HOM05D006743 ORTHO05D008518 1.4e-126 456.8 328 72.3
CSS0008818 Camellia sinensis var. sinensis HOM05D006743 ORTHO05D008518 2.5e-126 456.1 319 73.7
COL.COLO4_22995 Corchorus olitorius HOM05D006743 ORTHO05D008518 2.5e-126 456.1 329 71.7
GSVIVG01020003001 Vitis vinifera HOM05D006743 ORTHO05D008518 4.2e-126 455.3 327 71.3
Carub.0001s1398 Capsella rubella HOM05D006743 ORTHO05D008518 5.5e-126 454.9 326 71.5
ECA233G3761 Erigeron canadensis HOM05D006743 ORTHO05D008518 5.5e-126 454.9 322 71.7
TAR622G0326 Trochodendron aralioides HOM05D006743 ORTHO05D008518 5.5e-126 454.9 327 70.9
FAN22G1517 Fragaria x ananassa HOM05D006743 ORTHO05D008518 7.2e-126 454.5 328 71.6
RcHm_v2.0_Chr4g0439961 Rosa chinensis HOM05D006743 ORTHO05D008518 7.2e-126 454.5 328 72.0
Manes.01G186600 Manihot esculenta HOM05D006743 ORTHO05D008518 9.4e-126 454.1 318 73.0
Sp1g12650 Schrenkiella parvula HOM05D006743 ORTHO05D008518 1.2e-125 453.8 326 71.5
Lsat_1_v5_gn_8_52820 Lactuca sativa HOM05D006743 ORTHO05D008518 1.6e-125 453.4 325 71.4
AL1G26180 Arabidopsis lyrata HOM05D006743 ORTHO05D008518 4.7e-125 451.8 323 71.8
Aa31LG1G750 Aethionema arabicum HOM05D006743 ORTHO05D008518 2.3e-124 449.5 322 70.5
Rhsim12G0063200 Rhododendron simsii HOM05D006743 ORTHO05D008518 3.9e-124 448.7 322 73.0
Hund05886 Selenicereus undatus HOM05D006743 ORTHO05D008518 8.8e-124 447.6 324 72.2
BcaC05g25323 Brassica carinata HOM05D006743 ORTHO05D008518 2.0e-123 446.4 327 71.3
MBI02_g23683_MAGBIO Magnolia biondii HOM05D006743 ORTHO05D008518 2.0e-123 446.4 324 70.4
CARHR014720 Cardamine hirsuta HOM05D006743 ORTHO05D008518 2.6e-123 446.0 326 70.9
AT1G14300 Arabidopsis thaliana HOM05D006743 ORTHO05D008518 4.4e-123 445.3 326 70.2
Hma1.2p1_0598F.1_g186630 Hydrangea macrophylla HOM05D006743 ORTHO05D008518 5.7e-123 444.9 327 71.6
EL10Ac6g13192 Beta vulgaris HOM05D006743 ORTHO05D008518 7.4e-123 444.5 318 72.6
A06p10280 Brassica napus HOM05D006743 ORTHO05D008518 9.7e-123 444.1 327 70.6
BraA06t24210Z Brassica rapa HOM05D006743 ORTHO05D008518 1.7e-122 443.4 327 70.6
MELO3C024128.2 Cucumis melo HOM05D006743 ORTHO05D008518 3.7e-122 442.2 320 69.4
CsaV3_7G025360 Cucumis sativus L. HOM05D006743 ORTHO05D008518 8.2e-122 441.0 320 69.4
C05p12050 Brassica napus HOM05D006743 ORTHO05D008518 1.4e-121 440.3 327 69.7
Peaxi162Scf00541g00528 Petunia axillaris HOM05D006743 ORTHO05D008518 3.1e-121 439.1 325 69.8
AUR62028791 Chenopodium quinoa HOM05D006743 ORTHO05D008518 5.3e-121 438.3 318 71.4
Potri.019G092000 Populus trichocarpa HOM05D006743 ORTHO05D008518 3.5e-120 435.6 315 70.8
Thecc.02G350900 Theobroma cacao HOM05D006743 ORTHO05D008518 3.5e-120 435.6 327 70.6
MSTRG.13418 Avicennia marina HOM05D006743 ORTHO05D008518 1.0e-119 434.1 321 70.4
Lj3C1038T21 Lonicera japonica HOM05D006743 ORTHO05D008518 1.0e-119 434.1 319 71.2
BolC5t29959H Brassica oleracea HOM05D006743 ORTHO05D008518 1.3e-119 433.7 312 70.8
Cc11_g13110 Coffea canephora HOM05D006743 ORTHO05D008518 2.2e-119 433.0 312 72.4
unitig_22.g5546 Utricularia gibba HOM05D006743 ORTHO05D008518 2.7e-117 426.0 325 68.6
PSO478G0657 Papaver somniferum HOM05D006743 ORTHO05D008518 4.7e-117 425.2 329 67.8
vmacro01252 Vaccinium macrocarpon HOM05D006743 ORTHO05D008518 1.8e-116 423.3 364 64.0
Solyc05g007440.3 Solanum lycopersicum HOM05D006743 ORTHO05D008518 5.2e-116 421.8 325 67.7
AUR62005766 Chenopodium quinoa HOM05D006743 ORTHO05D008518 8.8e-116 421.0 336 67.0
FAN12G0030 Fragaria x ananassa HOM05D006743 ORTHO05D008518 8.8e-116 421.0 388 61.1
SalBow8G2540 Salvia bowleyana HOM05D006743 ORTHO05D008518 8.8e-116 421.0 326 67.5
PGSC0003DMG400003385 Solanum tuberosum HOM05D006743 ORTHO05D008518 1.5e-115 420.2 327 67.3
CAN.G58.36 Capsicum annuum HOM05D006743 ORTHO05D008518 5.7e-115 418.3 327 66.7
Nitab4.5_0012364g0010 Nicotiana tabacum HOM05D006743 ORTHO05D008518 5.7e-115 418.3 328 66.5
Sabra13G0103000 Salix brachista HOM05D006743 ORTHO05D008518 9.7e-115 417.5 343 64.1
DCAR_007148 Daucus carota HOM05D006743 ORTHO05D008518 2.4e-113 412.9 325 64.6
CDE02G3655 Ceratophyllum demersum HOM05D006743 ORTHO05D008518 7.0e-113 411.4 325 65.2
Aqoxy3G00673 Aquilegia oxysepala HOM05D006743 ORTHO05D008518 2.0e-112 409.8 327 64.2
ATR0564G062 Amborella trichopoda HOM05D006743 ORTHO05D008518 5.9e-112 408.3 315 66.7
ClCG09G009490 Citrullus lanatus HOM05D006743 ORTHO05D008518 1.3e-111 407.1 283 71.0
Nn3g17215 Nelumbo nucifera HOM05D006743 ORTHO05D008518 6.1e-109 398.3 299 68.6
SGA_v2.0_scaffold389G50576 Striga asiatica HOM05D006743 ORTHO05D008518 9.8e-107 391.0 326 62.6
Nitab4.5_0000703g0080 Nicotiana tabacum HOM05D006743 ORTHO05D008518 1.7e-106 390.2 302 66.2
Duzib268G1478 Durio zibethinus HOM05D006743 ORTHO05D008518 1.0e-103 380.9 327 63.3
BcaNung06708 Brassica carinata HOM05D006743 ORTHO05D008518 1.9e-102 376.7 318 62.9
Actinidia31893 Actinidia chinensis HOM05D006743 ORTHO05D008518 1.6e-101 373.6 330 60.9
Zm00001eb223220 Zea mays HOM05D006743 ORTHO05D008518 3.6e-101 372.5 327 61.5
Sc14g0008270 Simmondsia chinensis HOM05D006743 ORTHO05D008518 1.5e-99 367.1 272 71.3
Sopen05g003320 Solanum pennellii HOM05D006743 ORTHO05D008518 5.7e-99 365.2 254 71.7
Os10g0406800 Oryza sativa ssp. japonica HOM05D006743 ORTHO05D008518 1.4e-97 360.5 329 61.1
Sed0013774 Sechium edule HOM05D006743 ORTHO05D008518 3.5e-96 355.9 312 60.3
Mapoly0146s0011 Marchantia polymorpha HOM05D006743 ORTHO05D008518 1.9e-94 350.1 316 56.3
Pp3c6_14800 Physcomitrium patens HOM05D006743 ORTHO05D008518 5.2e-92 342.0 318 54.4
HPP92_011352 Vanilla planifolia HOM05D006743 ORTHO05D008518 2.7e-88 329.7 243 67.5
Hma1.2p1_0598F.1_g186620 Hydrangea macrophylla HOM05D006743 ORTHO05D008518 3.3e-86 322.8 207 77.3
SMO307G0042 Selaginella moellendorffii HOM05D006743 ORTHO05D008518 6.2e-85 318.5 314 52.9
Migut.E00100 Erythranthe guttata HOM05D006743 ORTHO05D008518 2.3e-84 316.6 197 77.7
AagrBONN_evm.TU.Sc2ySwM_344.2267 Anthoceros agrestis HOM05D006743 ORTHO05D008518 3.9e-79 299.3 315 52.4
Oeu045403.1 Olea europaea HOM05D006743 ORTHO05D008518 5.2e-76 288.9 185 76.2
AagrBONN_evm.TU.Sc2ySwM_27.11 Anthoceros agrestis HOM05D006743 ORTHO05D008518 4.9e-74 282.3 315 48.9
Lsat_1_v5_gn_7_2081 Lactuca sativa HOM05D006743 ORTHO05D008518 1.1e-70 271.2 238 62.2
DCAR_010724 Daucus carota HOM05D006743 ORTHO05D008518 1.7e-66 257.3 319 46.4
QL03p064380 Quercus lobata HOM05D006743 ORTHO05D008518 2.7e-64 250.0 191 69.6
AagrBONN_evm.TU.Sc2ySwM_27.9 Anthoceros agrestis HOM05D006743 ORTHO05D008518 8.7e-63 245.0 315 44.8
Peaxi162Scf00541g00531 Petunia axillaris HOM05D006743 ORTHO05D008518 2.1e-61 240.4 175 68.0
CBR_g41270 Chara braunii HOM05D006743 ORTHO05D008518 7.6e-59 231.9 338 40.5
Sabra19G0105400 Salix brachista HOM05D006743 ORTHO05D008518 3.5e-56 223.0 360 42.8
AagrBONN_evm.TU.Sc2ySwM_117.3556 Anthoceros agrestis HOM05D006743 ORTHO05D008518 5.8e-51 205.7 175 54.9
Nn1g08820 Nelumbo nucifera HOM05D006743 ORTHO05D008518 5.1e-39 166.0 283 39.9
Nn4g22981 Nelumbo nucifera HOM05D006743 ORTHO05D008518 5.1e-39 166.0 283 39.9
Cre10.g437100 Chlamydomonas reinhardtii HOM05D006743 ORTHO05D008518 2.9e-34 150.2 321 30.5
Oeu045402.1 Olea europaea HOM05D006743 ORTHO05D008518 5.0e-34 149.4 143 60.1
QL03p064376 Quercus lobata HOM05D006743 ORTHO05D008518 1.4e-33 147.9 86 82.6
Migut.E00098 Erythranthe guttata HOM05D006743 ORTHO05D008518 1.1e-22 111.7 115 58.3
PRCOL_00003635 Prasinoderma coloniale HOM05D006743 ORTHO05D008518 4.8e-21 106.3 319 28.2
SEGI_09156 Sequoiadendron giganteum HOM05D006743 ORTHO05D008518 4.8e-21 106.3 74 64.9
Actinidia28328 Actinidia chinensis HOM05D006743 ORTHO05D008518 2.9e-18 97.1 115 50.4
Ca_23751_v3 Cicer arietinum L. HOM05D005416 ORTHO05D007956 6.1e-16 89.4 72 68.1
Ca_27492_v3 Cicer arietinum L. HOM05D005416 ORTHO05D007956 6.1e-16 89.4 72 68.1
RcHm_v2.0_Chr5g0047461 Rosa chinensis HOM05D006743 ORTHO05D008518 1.1e-06 58.5 35 80.0


User provided reference genes

Program Settings