Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G3176 Trifolium pratense HOM05D000319 ORTHO05D012918 1.2e-49 199.5 97 100.0
TPR.G3173 Trifolium pratense HOM05D000319 ORTHO05D012918 3.0e-21 105.1 154 42.2
TPR.G3170 Trifolium pratense HOM05D000319 ORTHO05D012918 1.4e-15 86.3 42 92.9
TPR.G3217 Trifolium pratense HOM05D000319 ORTHO05D012918 1.1e-10 70.1 121 37.2
Medtr4g119490 Medicago truncatula HOM05D000319 ORTHO05D000903 1.5e-09 66.2 202 28.2
Medtr4g119450 Medicago truncatula HOM05D000319 ORTHO05D000903 3.8e-08 61.6 52 57.7
Medtr4g119930 Medicago truncatula HOM05D000319 ORTHO05D000903 1.9e-07 59.3 46 60.9
TPR.G3188 Trifolium pratense HOM05D037574 ORTHO05D000047 4.2e-07 58.2 45 60.0
Haze_10407 Corylus avellana HOM05D000319 ORTHO05D000903 7.2e-07 57.4 47 55.3
TPR.G14623 Trifolium pratense HOM05D000212 ORTHO05D015607 7.2e-07 57.4 46 56.5
Os05g0149600 Oryza sativa ssp. japonica HOM05D000319 ORTHO05D012918 1.2e-06 56.6 40 62.5
Dinv33020 Davidia involucrata HOM05D000319 ORTHO05D000903 2.7e-06 55.5 47 53.2
arahy.Tifrunner.gnm1.ann1.0G4LNA Arachis hypogaea HOM05D000161 ORTHO05D000111 4.6e-06 54.7 44 56.8
MD03G1282100 Malus domestica HOM05D000319 ORTHO05D000903 4.6e-06 54.7 42 57.1
Medtr7g108340 Medicago truncatula HOM05D000319 ORTHO05D000903 4.6e-06 54.7 42 57.1
Psat0s2141g0080 Pisum sativum HOM05D000319 ORTHO05D000903 4.6e-06 54.7 72 41.7
GSVIVG01010966001 Vitis vinifera HOM05D000319 ORTHO05D000903 4.6e-06 54.7 38 65.8
COL.COLO4_07999 Corchorus olitorius HOM05D000319 ORTHO05D000903 6.1e-06 54.3 42 57.1
Prupe.8G255500 Prunus persica HOM05D000319 ORTHO05D000903 6.1e-06 54.3 42 57.1
MD11G1301900 Malus domestica HOM05D000319 ORTHO05D000903 7.9e-06 53.9 42 54.8
Medtr4g119422 Medicago truncatula HOM05D000319 ORTHO05D015607 7.9e-06 53.9 46 52.2
Phvul.009G246300 Phaseolus vulgaris HOM05D000319 ORTHO05D000903 7.9e-06 53.9 47 55.3
Psat1g152360 Pisum sativum HOM05D000319 ORTHO05D000903 7.9e-06 53.9 47 55.3
VMungo1309G1220 Vigna mungo HOM05D000319 ORTHO05D000903 7.9e-06 53.9 47 55.3


User provided reference genes

Program Settings