Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G31694 Trifolium pratense HOM05D014522 ORTHO05D004438 2.4e-60 235.3 120 100.0
Medtr4g056580 Medicago truncatula HOM05D014522 ORTHO05D004438 2.9e-34 148.7 122 68.9
Lj3g0006440 Lotus japonicus HOM05D014522 ORTHO05D004438 2.4e-20 102.4 115 56.5
Glyma.11G191500 Glycine max HOM05D014522 ORTHO05D004438 3.2e-17 92.0 125 52.0
Glyma.12G082800 Glycine max HOM05D014522 ORTHO05D004438 4.2e-17 91.7 122 52.5
VMungo1127G0478 Vigna mungo HOM05D014522 ORTHO05D004438 1.4e-12 76.6 77 53.2
Lalb_Chr03g0027791 Lupinus albus HOM05D014522 ORTHO05D004438 2.0e-11 72.8 89 50.6
Lalb_Chr01g0004641 Lupinus albus HOM05D014522 ORTHO05D004438 3.8e-10 68.6 78 52.6
Lalb_Chr19g0136841 Lupinus albus HOM05D014522 ORTHO05D004438 1.1e-09 67.0 74 54.1
Manes.07G093500 Manihot esculenta HOM05D005304 ORTHO05D004438 1.6e-08 63.2 119 37.0
Potri.008G029600 Populus trichocarpa HOM05D005304 ORTHO05D004438 1.6e-08 63.2 122 39.3
CSS0034177 Camellia sinensis var. sinensis HOM05D005304 ORTHO05D004438 2.8e-08 62.4 113 40.7
Haze_16785 Corylus avellana HOM05D005304 ORTHO05D004438 4.0e-07 58.5 80 45.0
Manes.11G153500 Manihot esculenta HOM05D005304 ORTHO05D004438 5.2e-07 58.2 122 34.4
TAR369G0323 Trochodendron aralioides HOM05D001401 ORTHO05D002222 5.2e-07 58.2 67 46.3
Cfa001771 Carpinus fangiana HOM05D005304 ORTHO05D004438 6.8e-07 57.8 68 47.1
CiPaw.02G169800 Carya illinoinensis HOM05D005304 ORTHO05D004438 1.2e-06 57.0 64 46.9
Potri.010G231600 Populus trichocarpa HOM05D005304 ORTHO05D004438 1.2e-06 57.0 122 39.3
TAR623G1332 Trochodendron aralioides HOM05D005304 ORTHO05D004438 1.5e-06 56.6 100 40.0
Sabra08G0019800 Salix brachista HOM05D005304 ORTHO05D004438 2.0e-06 56.2 118 37.3
Eucgr.J00398 Eucalyptus grandis HOM05D005304 ORTHO05D004438 2.6e-06 55.8 100 37.0
Thecc.10G090600 Theobroma cacao HOM05D005304 ORTHO05D004438 3.4e-06 55.5 113 33.6
Aqoxy2G01602 Aquilegia oxysepala HOM05D005304 ORTHO05D004438 5.7e-06 54.7 72 43.1
Gohir.A05G393600 Gossypium hirsutum HOM05D005304 ORTHO05D004438 5.7e-06 54.7 66 43.9
Cc02_g10500 Coffea canephora HOM05D005304 ORTHO05D004438 7.5e-06 54.3 82 42.7
Duzib150G0717 Durio zibethinus HOM05D005304 ORTHO05D004438 7.5e-06 54.3 67 47.8
Nn2g13894 Nelumbo nucifera HOM05D005304 ORTHO05D004438 7.5e-06 54.3 70 47.1
PGR044G0041 Punica granatum HOM05D005304 ORTHO05D004438 9.8e-06 53.9 65 46.2
QL08p052941 Quercus lobata HOM05D005304 ORTHO05D004438 9.8e-06 53.9 74 48.6


User provided reference genes

Program Settings