Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G31658 Trifolium pratense HOM05D000108 ORTHO05D412133 7.7e-61 236.9 114 100.0
Ca_01618_v3 Cicer arietinum L. HOM05D000108 ORTHO05D001378 4.8e-18 94.7 86 65.1
TPR.G4215 Trifolium pratense HOM05D000108 ORTHO05D001378 8.1e-18 94.0 89 62.9
Medtr2g087840 Medicago truncatula HOM05D000108 ORTHO05D001378 1.5e-16 89.7 84 61.9
Psat5g263040 Pisum sativum HOM05D000108 ORTHO05D001378 1.1e-14 83.6 84 59.5
Lalb_Chr24g0393321 Lupinus albus HOM05D000108 ORTHO05D001378 4.6e-13 78.2 86 57.0
Phvul.005G117200 Phaseolus vulgaris HOM05D000108 ORTHO05D001378 1.9e-11 72.8 85 54.1
Cfa010218 Carpinus fangiana HOM05D000108 ORTHO05D001378 5.6e-11 71.2 84 47.6
Haze_23605 Corylus avellana HOM05D000108 ORTHO05D001378 5.6e-11 71.2 84 47.6
Glyma.13G310700 Glycine max HOM05D000108 ORTHO05D001378 1.6e-10 69.7 86 53.5
MD03G1160900 Malus domestica HOM05D000108 ORTHO05D001378 1.6e-10 69.7 107 40.2
Glyma.12G191000 Glycine max HOM05D000108 ORTHO05D001378 2.1e-10 69.3 86 53.5
QL01p018894 Quercus lobata HOM05D000108 ORTHO05D001378 6.2e-10 67.8 84 46.4
arahy.Tifrunner.gnm1.ann1.12RI9F Arachis hypogaea HOM05D000108 ORTHO05D001378 2.4e-09 65.9 87 46.0
TAR636G1244 Trochodendron aralioides HOM05D000108 ORTHO05D001378 2.4e-09 65.9 84 46.4
Sabra09G0122300 Salix brachista HOM05D000108 ORTHO05D001378 6.9e-09 64.3 84 50.0
VMungo1080G1113 Vigna mungo HOM05D000108 ORTHO05D001378 6.9e-09 64.3 85 50.6
MD11G1176500 Malus domestica HOM05D000108 ORTHO05D001378 9.0e-09 63.9 107 38.3
Potri.009G156000 Populus trichocarpa HOM05D000108 ORTHO05D001378 9.0e-09 63.9 84 48.8
Atru.chr3.3051 Acer truncatum HOM05D000108 ORTHO05D001378 1.2e-08 63.5 92 42.4
Atru.chr3.3060 Acer truncatum HOM05D000108 ORTHO05D001378 1.2e-08 63.5 92 42.4
Eucgr.B03797 Eucalyptus grandis HOM05D000108 ORTHO05D001378 1.2e-08 63.5 84 45.2
RcHm_v2.0_Chr5g0049231 Rosa chinensis HOM05D000108 ORTHO05D001378 1.5e-08 63.2 85 45.9
Thecc.09G269500 Theobroma cacao HOM05D000108 ORTHO05D001378 3.4e-08 62.0 107 36.4
CsaV3_1G004510 Cucumis sativus L. HOM05D000108 ORTHO05D001378 4.5e-08 61.6 92 40.2
FAN21G0222 Fragaria x ananassa HOM05D000108 ORTHO05D001378 5.8e-08 61.2 93 43.0
Solyc11g071730.3 Solanum lycopersicum HOM05D000108 ORTHO05D001378 5.8e-08 61.2 84 44.0
Sopen11g029400 Solanum pennellii HOM05D000108 ORTHO05D001378 5.8e-08 61.2 84 44.0
CANSAT54G0196 Cannabis sativa HOM05D000108 ORTHO05D001378 7.6e-08 60.8 84 46.4
Potri.004G193700 Populus trichocarpa HOM05D000108 ORTHO05D001378 9.9e-08 60.5 84 44.0
Cpa.g.sc103.41 Carica papaya HOM05D000108 ORTHO05D001378 1.3e-07 60.1 84 45.2
Peaxi162Scf00259g00125 Petunia axillaris HOM05D000108 ORTHO05D001378 1.3e-07 60.1 107 36.4
Prupe.6G149000 Prunus persica HOM05D000108 ORTHO05D001378 1.3e-07 60.1 88 43.2
CSS0001215 Camellia sinensis var. sinensis HOM05D000108 ORTHO05D001378 2.2e-07 59.3 84 42.9
CSS0042983 Camellia sinensis var. sinensis HOM05D000108 ORTHO05D001378 2.2e-07 59.3 84 41.7
Lj2A835T19 Lonicera japonica HOM05D000108 ORTHO05D001378 2.2e-07 59.3 84 42.9
TAR633G0473 Trochodendron aralioides HOM05D000108 ORTHO05D001378 4.9e-07 58.2 84 42.9
Nn2g14427 Nelumbo nucifera HOM05D000108 ORTHO05D001378 6.4e-07 57.8 84 44.0
EL10Ac7g16261 Beta vulgaris HOM05D000108 ORTHO05D001378 8.4e-07 57.4 84 41.7
FAN25G1370 Fragaria x ananassa HOM05D000108 ORTHO05D001378 8.4e-07 57.4 92 40.2
PSO339G5089 Papaver somniferum HOM05D000108 ORTHO05D001378 8.4e-07 57.4 84 41.7
Actinidia22458 Actinidia chinensis HOM05D000108 ORTHO05D001378 1.1e-06 57.0 85 41.2
Aqoxy2G00635 Aquilegia oxysepala HOM05D000108 ORTHO05D001378 1.1e-06 57.0 84 40.5
CiPaw.13G125600 Carya illinoinensis HOM05D000108 ORTHO05D001378 1.1e-06 57.0 92 39.1
ClCG06G014170 Citrullus lanatus HOM05D000108 ORTHO05D001378 1.1e-06 57.0 91 39.6
FvH4_3g26820 Fragaria vesca HOM05D000108 ORTHO05D001378 1.9e-06 56.2 47 63.8
Gorai.009G081900 Gossypium raimondii HOM05D000108 ORTHO05D001378 1.9e-06 56.2 92 38.0
Gohir.D05G080200 Gossypium hirsutum HOM05D000108 ORTHO05D001378 2.4e-06 55.8 92 38.0
MSTRG.18801 Avicennia marina HOM05D000108 ORTHO05D001378 3.2e-06 55.5 85 40.0
Dinv32148 Davidia involucrata HOM05D000108 ORTHO05D001378 3.2e-06 55.5 84 41.7
FAN16G2246 Fragaria x ananassa HOM05D000108 ORTHO05D001378 3.2e-06 55.5 55 56.4
PSO384G4884 Papaver somniferum HOM05D000108 ORTHO05D001378 3.2e-06 55.5 82 42.7
Duzib150G0790 Durio zibethinus HOM05D000108 ORTHO05D001378 4.2e-06 55.1 84 40.5
Sabra04G0131700 Salix brachista HOM05D000108 ORTHO05D001378 4.2e-06 55.1 84 41.7
Sabra04G0131900 Salix brachista HOM05D000108 ORTHO05D001378 4.2e-06 55.1 84 41.7
TWI79G1662 Tripterygium wilfordii HOM05D000108 ORTHO05D001378 4.2e-06 55.1 86 43.0
unitig_22.g6167 Utricularia gibba HOM05D000108 ORTHO05D001378 5.5e-06 54.7 88 43.2
Ciclev10027695m.g Citrus clementina HOM05D000108 ORTHO05D001378 7.1e-06 54.3 92 37.0
Gohir.A05G077400 Gossypium hirsutum HOM05D000108 ORTHO05D001378 7.1e-06 54.3 92 37.0


User provided reference genes

Program Settings