Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G31638 Trifolium pratense HOM05D001243 ORTHO05D000843 2.2e-130 469.2 265 100.0
TPR.G31646 Trifolium pratense HOM05D001243 ORTHO05D000843 3.3e-86 322.4 264 67.8
Medtr4g092510 Medicago truncatula HOM05D001243 ORTHO05D000843 9.2e-73 277.7 280 59.6
Medtr4g092440 Medicago truncatula HOM05D001243 ORTHO05D000843 2.7e-72 276.2 275 58.2
TPR.G31647 Trifolium pratense HOM05D001243 ORTHO05D000843 3.0e-63 246.1 242 62.4
Medtr4g051560 Medicago truncatula HOM05D001243 ORTHO05D000843 5.2e-60 235.3 226 60.6
TPR.G16880 Trifolium pratense HOM05D000665 ORTHO05D000921 4.4e-59 232.3 197 66.0
Medtr4g092430 Medicago truncatula HOM05D001243 ORTHO05D000843 3.8e-58 229.2 250 54.0
Medtr4g051480 Medicago truncatula HOM05D001243 ORTHO05D000843 1.1e-57 227.6 234 58.5
Medtr8g085310 Medicago truncatula HOM05D001243 ORTHO05D000843 5.1e-55 218.8 203 61.6
Medtr4g092980 Medicago truncatula HOM05D001243 ORTHO05D000843 1.1e-54 217.6 244 57.4
Psat7g106440 Pisum sativum HOM05D001243 ORTHO05D000843 4.0e-52 209.1 263 51.0
Psat7g106520 Pisum sativum HOM05D001243 ORTHO05D000843 1.2e-51 207.6 195 60.0
Medtr1g094760 Medicago truncatula HOM05D001243 ORTHO05D000843 7.6e-51 204.9 210 58.6
Medtr4g090940 Medicago truncatula HOM05D001243 ORTHO05D000843 2.9e-50 203.0 241 54.8
Medtr4g092300 Medicago truncatula HOM05D001243 ORTHO05D000843 3.8e-50 202.6 234 54.7
Psat7g105000 Pisum sativum HOM05D001243 ORTHO05D000843 1.1e-49 201.1 248 50.8
Psat7g078000 Pisum sativum HOM05D001243 ORTHO05D000843 1.7e-47 193.7 205 56.6
Medtr6g088700 Medicago truncatula HOM05D001243 ORTHO05D000843 3.5e-40 169.5 165 60.0
Medtr4g050940 Medicago truncatula HOM05D001243 ORTHO05D000843 8.7e-39 164.9 239 49.4
Ca_18445_v3 Cicer arietinum L. HOM05D001243 ORTHO05D000843 7.4e-38 161.8 160 58.1
TPR.G1001 Trifolium pratense HOM05D001243 ORTHO05D000843 1.3e-37 161.0 161 57.1
Medtr5g044800 Medicago truncatula HOM05D001243 ORTHO05D000843 4.8e-37 159.1 182 51.6
Medtr5g044860 Medicago truncatula HOM05D001243 ORTHO05D000843 3.1e-36 156.4 182 50.5
Medtr4g092390 Medicago truncatula HOM05D001243 ORTHO05D000843 1.0e-34 151.4 162 54.3
Medtr4g092360 Medicago truncatula HOM05D001243 ORTHO05D000843 2.2e-34 150.2 158 58.2
Medtr4g133790 Medicago truncatula HOM05D001243 ORTHO05D000843 4.2e-33 146.0 149 58.4
TPR.G6356 Trifolium pratense HOM05D001243 ORTHO05D000843 1.3e-26 124.4 156 51.3
Ca_16017_v3 Cicer arietinum L. HOM05D001243 ORTHO05D000843 3.8e-26 122.9 157 52.2
Ca_16015_v3 Cicer arietinum L. HOM05D001243 ORTHO05D000843 8.4e-26 121.7 156 51.3
TPR.G6301 Trifolium pratense HOM05D001243 ORTHO05D000843 8.4e-26 121.7 156 50.0
Medtr5g087940 Medicago truncatula HOM05D001243 ORTHO05D000843 1.9e-25 120.6 157 49.7
Lj1g0006887 Lotus japonicus HOM05D001243 ORTHO05D000843 7.1e-25 118.6 168 43.5
Medtr4g014260 Medicago truncatula HOM05D001243 ORTHO05D000843 1.6e-24 117.5 156 46.8
Medtr3g099900 Medicago truncatula HOM05D001243 ORTHO05D000843 6.7e-23 112.1 154 48.7
Glyma.06G098100 Glycine max HOM05D001243 ORTHO05D000843 1.1e-22 111.3 157 48.4
Medtr3g023490 Medicago truncatula HOM05D001243 ORTHO05D000843 1.9e-22 110.5 157 47.1
Psat7g105280 Pisum sativum HOM05D001243 ORTHO05D000843 1.9e-22 110.5 124 56.5
Psat7g104640 Pisum sativum HOM05D001243 ORTHO05D000843 2.5e-22 110.2 158 44.3
Lj1g0012385 Lotus japonicus HOM05D001243 ORTHO05D000843 3.3e-22 109.8 162 46.9
Psat5g224560 Pisum sativum HOM05D001243 ORTHO05D000843 5.7e-22 109.0 157 43.3
Ca_16018_v3 Cicer arietinum L. HOM05D001243 ORTHO05D000843 7.4e-22 108.6 157 47.1
Medtr3g052940 Medicago truncatula HOM05D001243 ORTHO05D000843 1.3e-21 107.8 157 43.3
Medtr3g052990 Medicago truncatula HOM05D001243 ORTHO05D000843 1.6e-21 107.5 156 44.9
Medtr3g023440 Medicago truncatula HOM05D001243 ORTHO05D000843 8.2e-21 105.1 160 46.2
Medtr8g066650 Medicago truncatula HOM05D001243 ORTHO05D000843 1.1e-20 104.8 160 41.2
Medtr3g023470 Medicago truncatula HOM05D001243 ORTHO05D000843 1.8e-20 104.0 161 44.7
Medtr4g077520 Medicago truncatula HOM05D001243 ORTHO05D000843 3.1e-20 103.2 168 44.0
Psat7g105120 Pisum sativum HOM05D001243 ORTHO05D000843 3.1e-20 103.2 169 40.8
arahy.Tifrunner.gnm1.ann1.FC16B5 Arachis hypogaea HOM05D001243 ORTHO05D000843 5.3e-20 102.4 157 46.5
arahy.Tifrunner.gnm1.ann1.ZEI2BD Arachis hypogaea HOM05D001243 ORTHO05D000843 5.3e-20 102.4 157 46.5
Ca_18444_v3 Cicer arietinum L. HOM05D001243 ORTHO05D000843 1.2e-19 101.3 193 38.3
Medtr5g020820 Medicago truncatula HOM05D001243 ORTHO05D000843 1.5e-19 100.9 156 46.2
Medtr3g036240 Medicago truncatula HOM05D001243 ORTHO05D000843 4.5e-19 99.4 157 43.3
Lj1g0028071 Lotus japonicus HOM05D001243 ORTHO05D000843 3.8e-18 96.3 165 43.0
Lj1g0016945 Lotus japonicus HOM05D001243 ORTHO05D000843 1.1e-17 94.7 161 42.2
Lj1g0013584 Lotus japonicus HOM05D001243 ORTHO05D000843 3.2e-17 93.2 158 42.4
Medtr3g019240 Medicago truncatula HOM05D001243 ORTHO05D000843 3.2e-17 93.2 157 40.8
TPR.G31641 Trifolium pratense HOM05D001243 ORTHO05D000843 3.2e-17 93.2 173 43.9
Ca_25877_v3 Cicer arietinum L. HOM05D001243 ORTHO05D000843 5.5e-17 92.4 113 51.3
Lj1g0004296 Lotus japonicus HOM05D001243 ORTHO05D000843 9.4e-17 91.7 162 40.7
Lj3g0020836 Lotus japonicus HOM05D001243 ORTHO05D000843 9.4e-17 91.7 169 37.3
Lj1g0019762 Lotus japonicus HOM05D001243 ORTHO05D000843 1.2e-16 91.3 157 39.5
TPR.G2514 Trifolium pratense HOM05D001243 ORTHO05D000843 1.2e-16 91.3 161 42.2
Medtr3g036320 Medicago truncatula HOM05D001243 ORTHO05D000843 1.6e-16 90.9 159 40.3
Lj1g0003090 Lotus japonicus HOM05D001243 ORTHO05D000843 2.1e-16 90.5 160 41.2
Psat5g214640 Pisum sativum HOM05D001243 ORTHO05D000843 2.7e-16 90.1 164 42.7
Psat0s4160g0040 Pisum sativum HOM05D001243 ORTHO05D000843 7.9e-16 88.6 200 37.0
Psat5g213960 Pisum sativum HOM05D001243 ORTHO05D000843 7.9e-16 88.6 200 37.0
Psat5g156600 Pisum sativum HOM05D001243 ORTHO05D000843 2.3e-15 87.0 159 38.4
Ca_27019_v3 Cicer arietinum L. HOM05D001243 ORTHO05D000843 5.1e-15 85.9 113 47.8
Medtr3g023270 Medicago truncatula HOM05D001243 ORTHO05D000843 5.1e-15 85.9 168 39.9
Medtr1g067190 Medicago truncatula HOM05D001243 ORTHO05D000843 6.7e-15 85.5 126 44.4
Medtr5g066560 Medicago truncatula HOM05D001243 ORTHO05D000843 1.5e-14 84.3 159 38.4
Psat5g206360 Pisum sativum HOM05D001243 ORTHO05D000843 2.0e-14 84.0 159 39.0
TPR.G5062 Trifolium pratense HOM05D001243 ORTHO05D000843 2.0e-14 84.0 162 37.0
Lj6g0025145 Lotus japonicus HOM05D001243 ORTHO05D000843 3.3e-14 83.2 168 36.3
Medtr4g045680 Medicago truncatula HOM05D001243 ORTHO05D000843 3.3e-14 83.2 161 41.0
Medtr4g051470 Medicago truncatula HOM05D001243 ORTHO05D000843 5.7e-14 82.4 122 44.3
Medtr7g080440 Medicago truncatula HOM05D001243 ORTHO05D000843 5.7e-14 82.4 162 37.0
Medtr3g019200 Medicago truncatula HOM05D001243 ORTHO05D000843 1.3e-13 81.3 157 38.9
Medtr3g006580 Medicago truncatula HOM05D001243 ORTHO05D000843 2.8e-13 80.1 158 37.3
Medtr3g014550 Medicago truncatula HOM05D001243 ORTHO05D000843 2.8e-13 80.1 116 43.1
Medtr3g014590 Medicago truncatula HOM05D001243 ORTHO05D000843 2.8e-13 80.1 116 43.1
Medtr2g101940 Medicago truncatula HOM05D001243 ORTHO05D000843 3.7e-13 79.7 158 36.1
Lj3g0018350 Lotus japonicus HOM05D001243 ORTHO05D000843 8.2e-13 78.6 159 34.0
Medtr3g019220 Medicago truncatula HOM05D001243 ORTHO05D000843 1.1e-12 78.2 158 39.2
Medtr3g023640 Medicago truncatula HOM05D001243 ORTHO05D000843 1.4e-12 77.8 154 38.3
Lj1g0001805 Lotus japonicus HOM05D001243 ORTHO05D000843 1.8e-12 77.4 158 36.1
Medtr3g036310 Medicago truncatula HOM05D001243 ORTHO05D000843 2.4e-12 77.0 95 47.4
Medtr3g019180 Medicago truncatula HOM05D001243 ORTHO05D000843 3.1e-12 76.6 194 34.0
Medtr8g062873 Medicago truncatula HOM05D001243 ORTHO05D000843 3.1e-12 76.6 164 36.6
Psat5g213200 Pisum sativum HOM05D001243 ORTHO05D000843 3.1e-12 76.6 116 43.1
Lalb_Chr11g0064361 Lupinus albus HOM05D001243 ORTHO05D000843 9.1e-12 75.1 158 34.2
Medtr0438s0020 Medicago truncatula HOM05D001243 ORTHO05D000843 1.2e-11 74.7 160 37.5
Medtr5g060750 Medicago truncatula HOM05D001243 ORTHO05D000843 1.2e-11 74.7 156 35.9
Medtr5g460900 Medicago truncatula HOM05D001243 ORTHO05D000843 1.2e-11 74.7 156 35.9
Psat2g066840 Pisum sativum HOM05D001243 ORTHO05D000843 1.5e-11 74.3 158 34.2
Medtr1g038760 Medicago truncatula HOM05D001243 ORTHO05D000843 2.0e-11 73.9 117 41.0
Medtr8g062850 Medicago truncatula HOM05D001243 ORTHO05D000843 3.4e-11 73.2 164 35.4
Medtr0210s0040 Medicago truncatula HOM05D001243 ORTHO05D000843 4.5e-11 72.8 90 48.9
Medtr6g018560 Medicago truncatula HOM05D001243 ORTHO05D000843 1.7e-10 70.9 98 42.9
Medtr6g018570 Medicago truncatula HOM05D001243 ORTHO05D000843 1.7e-10 70.9 98 42.9
Medtr6g025270 Medicago truncatula HOM05D001243 ORTHO05D000843 1.7e-10 70.9 98 42.9
arahy.Tifrunner.gnm1.ann1.26WN5G Arachis hypogaea HOM05D001243 ORTHO05D000843 2.9e-10 70.1 96 47.9
Psat7g017800 Pisum sativum HOM05D001243 ORTHO05D000843 5.0e-10 69.3 116 38.8
Medtr3g023330 Medicago truncatula HOM05D001243 ORTHO05D000843 1.1e-09 68.2 163 35.6
TPR.G31645 Trifolium pratense HOM05D001243 ORTHO05D413381 1.1e-09 68.2 77 63.6
Medtr7g021630 Medicago truncatula HOM05D001243 ORTHO05D000843 1.4e-09 67.8 163 35.0
Psat7g017320 Pisum sativum HOM05D001243 ORTHO05D000843 1.4e-09 67.8 93 44.1
Medtr3g005990 Medicago truncatula HOM05D001243 ORTHO05D000843 2.5e-09 67.0 158 32.9
Medtr4g050930 Medicago truncatula HOM05D001243 ORTHO05D000843 5.5e-09 65.9 158 36.1
Medtr3g036330 Medicago truncatula HOM05D001243 ORTHO05D000843 7.2e-09 65.5 160 37.5
Medtr3g100020 Medicago truncatula HOM05D001243 ORTHO05D000843 7.2e-09 65.5 128 35.9
arahy.Tifrunner.gnm1.ann1.CYC1SV Arachis hypogaea HOM05D001243 ORTHO05D000843 1.2e-08 64.7 96 45.8
Ca_18446_v3 Cicer arietinum L. HOM05D001243 ORTHO05D000843 1.2e-08 64.7 186 32.3
Medtr6g018660 Medicago truncatula HOM05D001243 ORTHO05D000843 1.6e-08 64.3 115 40.9
Medtr2g101950 Medicago truncatula HOM05D001243 ORTHO05D000843 2.7e-08 63.5 158 34.2
Medtr4g125740 Medicago truncatula HOM05D001243 ORTHO05D000843 3.6e-08 63.2 155 31.6
Medtr2g090845 Medicago truncatula HOM05D001243 ORTHO05D000843 7.9e-08 62.0 94 40.4
Medtr3g008050 Medicago truncatula HOM05D001243 ORTHO05D000843 3.0e-07 60.1 185 31.9
Psat7g105360 Pisum sativum HOM05D001243 ORTHO05D000843 3.0e-07 60.1 75 48.0
TPR.G17555 Trifolium pratense HOM05D001243 ORTHO05D000843 3.9e-07 59.7 117 38.5
Medtr4g051510 Medicago truncatula HOM05D001243 ORTHO05D000843 1.5e-06 57.8 67 49.3
Medtr7g021560 Medicago truncatula HOM05D001243 ORTHO05D000843 1.5e-06 57.8 112 35.7
Medtr4g055460 Medicago truncatula HOM05D001243 ORTHO05D000843 2.0e-06 57.4 93 44.1
Lj1g0010449 Lotus japonicus HOM05D001243 ORTHO05D000843 3.3e-06 56.6 94 37.2
Medtr3g052930 Medicago truncatula HOM05D001243 ORTHO05D000843 4.4e-06 56.2 69 44.9
Medtr3g007830 Medicago truncatula HOM05D001243 ORTHO05D000843 7.4e-06 55.5 97 41.2


User provided reference genes

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