Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G31517 Trifolium pratense HOM05D000120 ORTHO05D009410 2.2e-127 459.1 263 100.0
Ca_27169_v3 Cicer arietinum L. HOM05D000120 ORTHO05D009410 4.8e-82 308.5 267 65.5
Psat4g137840 Pisum sativum HOM05D000120 ORTHO05D009410 1.6e-64 250.4 282 62.8
Lj3g0001494 Lotus japonicus HOM05D000120 ORTHO05D009410 8.0e-61 238.0 268 53.7
Lalb_Chr03g0030591 Lupinus albus HOM05D000120 ORTHO05D009410 2.4e-57 226.5 266 53.0
Glyma.06G246300 Glycine max HOM05D000120 ORTHO05D009410 5.4e-57 225.3 295 51.5
Phvul.011G156600 Phaseolus vulgaris HOM05D000120 ORTHO05D009410 5.6e-54 215.3 267 49.8
arahy.Tifrunner.gnm1.ann1.X3J0BR Arachis hypogaea HOM05D000120 ORTHO05D009410 2.6e-51 206.5 263 47.5
VMungo1127G0720 Vigna mungo HOM05D000120 ORTHO05D009410 2.6e-51 206.5 268 48.1
Dinv23458 Davidia involucrata HOM05D000120 ORTHO05D009410 5.1e-31 139.0 261 38.7
Duzib132G0615 Durio zibethinus HOM05D000120 ORTHO05D009410 6.6e-31 138.7 277 37.9
GSVIVG01024178001 Vitis vinifera HOM05D000120 ORTHO05D009410 6.6e-31 138.7 254 39.4
FvH4_2g10380 Fragaria vesca HOM05D000120 ORTHO05D009410 4.3e-30 136.0 265 36.6
RcHm_v2.0_Chr6g0267851 Rosa chinensis HOM05D000120 ORTHO05D009410 9.6e-30 134.8 256 37.1
FAN20G2164 Fragaria x ananassa HOM05D000120 ORTHO05D009410 2.1e-29 133.7 265 36.2
FAN24G2037 Fragaria x ananassa HOM05D000120 ORTHO05D009410 2.1e-29 133.7 265 36.2
Haze_02260 Corylus avellana HOM05D000120 ORTHO05D009410 4.7e-29 132.5 264 37.5
TWI31G0702 Tripterygium wilfordii HOM05D000120 ORTHO05D009410 5.2e-28 129.0 263 38.4
Cfa005100 Carpinus fangiana HOM05D000722 ORTHO05D000590 6.9e-28 128.6 264 37.9
MD00G1040100 Malus domestica HOM05D000120 ORTHO05D009410 1.2e-27 127.9 282 35.1
Prupe.8G085200 Prunus persica HOM05D000120 ORTHO05D009410 2.6e-27 126.7 245 38.4
MD10G1063700 Malus domestica HOM05D000120 ORTHO05D009410 5.8e-27 125.6 282 34.4
Duzib248G0587 Durio zibethinus HOM05D000120 ORTHO05D009410 9.9e-27 124.8 275 36.7
Thecc.02G075700 Theobroma cacao HOM05D000120 ORTHO05D009410 2.9e-26 123.2 274 36.5
Ciclev10029808m.g Citrus clementina HOM05D000120 ORTHO05D009410 8.4e-26 121.7 256 37.9
vmacro02052 Vaccinium macrocarpon HOM05D000120 ORTHO05D009410 1.4e-25 120.9 270 36.7
TWI79G0897 Tripterygium wilfordii HOM05D000120 ORTHO05D009410 3.2e-25 119.8 258 38.0
Sabra09G0095200 Salix brachista HOM05D000120 ORTHO05D009410 4.2e-25 119.4 265 36.2
COL.COLO4_26040 Corchorus olitorius HOM05D000120 ORTHO05D009410 5.4e-25 119.0 275 37.1
Glyma.12G151000 Glycine max HOM05D000120 ORTHO05D009410 5.4e-25 119.0 137 51.1
Actinidia02243 Actinidia chinensis HOM05D000120 ORTHO05D009410 1.2e-24 117.9 240 35.0
Manes.04G083900 Manihot esculenta HOM05D000120 ORTHO05D009410 4.6e-24 115.9 244 37.3
CiPaw.06G128400 Carya illinoinensis HOM05D000120 ORTHO05D009410 3.0e-23 113.2 243 36.2
Oeu055633.1 Olea europaea HOM05D000120 ORTHO05D009410 3.9e-23 112.8 261 36.0
Potri.009G124000 Populus trichocarpa HOM05D000120 ORTHO05D009410 8.7e-23 111.7 251 35.9
Manes.11G082300 Manihot esculenta HOM05D000120 ORTHO05D009410 1.5e-22 110.9 270 34.1
FAN27G2529 Fragaria x ananassa HOM05D000120 ORTHO05D009410 2.1e-21 107.1 226 32.7
QL11p046369 Quercus lobata HOM05D000120 ORTHO05D009410 2.8e-21 106.7 225 36.0
TAR376G0786 Trochodendron aralioides HOM05D000120 ORTHO05D009410 3.6e-21 106.3 242 36.8
CANSAT11G1664 Cannabis sativa HOM05D000120 ORTHO05D009410 1.2e-19 101.3 245 34.7
Potri.004G162300 Populus trichocarpa HOM05D000120 ORTHO05D009410 1.5e-19 100.9 256 35.9
Atru.chr5.3139 Acer truncatum HOM05D000120 ORTHO05D009410 3.4e-19 99.8 245 32.7
MSTRG.5421 Avicennia marina HOM05D000120 ORTHO05D009410 1.7e-18 97.4 236 32.2
AUR62016822 Chenopodium quinoa HOM05D000120 ORTHO05D009410 4.9e-18 95.9 265 31.3
AUR62010396 Chenopodium quinoa HOM05D000120 ORTHO05D009410 1.1e-17 94.7 264 31.1
CsaV3_7G000360 Cucumis sativus L. HOM05D000120 ORTHO05D009410 1.1e-17 94.7 250 34.4
Peaxi162Scf00016g10015 Petunia axillaris HOM05D000120 ORTHO05D009410 2.1e-16 90.5 268 30.2
Hma1.2p1_1244F.1_g270010 Hydrangea macrophylla HOM05D000120 ORTHO05D009410 2.7e-16 90.1 261 34.5
MELO3C002789.2 Cucumis melo HOM05D000120 ORTHO05D009410 3.5e-16 89.7 251 33.1
Lsat_1_v5_gn_3_44160 Lactuca sativa HOM05D000120 ORTHO05D009410 1.3e-15 87.8 262 30.9
PGR042G1442 Punica granatum HOM05D000120 ORTHO05D009410 1.3e-15 87.8 275 29.5
Sc08g0000840 Simmondsia chinensis HOM05D000120 ORTHO05D009410 3.0e-15 86.7 261 28.0
Nn7g36692 Nelumbo nucifera HOM05D000120 ORTHO05D009410 5.1e-15 85.9 275 29.1
TAR628G1238 Trochodendron aralioides HOM05D000120 ORTHO05D009410 6.7e-15 85.5 262 32.8
Duzib052G0028 Durio zibethinus HOM05D000120 ORTHO05D009410 8.7e-15 85.1 247 31.2
DCAR_022914 Daucus carota HOM05D000120 ORTHO05D009410 1.1e-14 84.7 260 31.2
ClCG02G004590 Citrullus lanatus HOM05D000120 ORTHO05D009410 3.3e-14 83.2 249 31.3
Cc02_g16960 Coffea canephora HOM05D000120 ORTHO05D009410 3.3e-14 83.2 265 32.8
Sed0018675 Sechium edule HOM05D000120 ORTHO05D009410 9.6e-14 81.6 288 29.2
PSO210G7327 Papaver somniferum HOM05D000120 ORTHO05D009410 3.7e-13 79.7 247 30.4
Sopen01g052500 Solanum pennellii HOM05D000120 ORTHO05D009410 8.1e-13 78.6 260 29.2
Sed0016080 Sechium edule HOM05D000120 ORTHO05D009410 1.1e-12 78.2 284 29.9
PGSC0003DMG400046163 Solanum tuberosum HOM05D000120 ORTHO05D009410 1.1e-12 78.2 260 28.5
Eucgr.G01727 Eucalyptus grandis HOM05D000120 ORTHO05D009410 1.4e-12 77.8 240 30.0
ECA240G4650 Erigeron canadensis HOM05D000120 ORTHO05D009410 1.8e-12 77.4 238 31.9
Hund00217 Selenicereus undatus HOM05D000120 ORTHO05D000105 1.8e-12 77.4 280 30.0
Gorai.008G031900 Gossypium raimondii HOM05D000120 ORTHO05D009410 2.4e-12 77.0 349 27.5
Solyc01g110350.2 Solanum lycopersicum HOM05D000120 ORTHO05D009410 6.9e-12 75.5 260 28.5
Gohir.A12G041200 Gossypium hirsutum HOM05D000120 ORTHO05D009410 4.5e-11 72.8 349 26.1
Aqoxy5G01485 Aquilegia oxysepala HOM05D000120 ORTHO05D009410 7.6e-11 72.0 245 27.3
Migut.B00178 Erythranthe guttata HOM05D000120 ORTHO05D009410 2.9e-10 70.1 247 29.1
Gohir.D12G031200 Gossypium hirsutum HOM05D000120 ORTHO05D009410 4.9e-10 69.3 197 30.5
Nitab4.5_0017990g0010 Nicotiana tabacum HOM05D000120 ORTHO05D009410 6.4e-10 68.9 262 29.0
SGA_v2.0_scaffold32G13221 Striga asiatica HOM05D000120 ORTHO05D009410 6.4e-10 68.9 264 28.0
arahy.Tifrunner.gnm1.ann1.T5BQ73 Arachis hypogaea HOM05D000120 ORTHO05D009410 8.4e-10 68.6 94 46.8
Cpa.g.sc150.20 Carica papaya HOM05D000120 ORTHO05D009410 1.4e-09 67.8 248 29.4
HanXRQChr15g0478301 Helianthus annuus HOM05D000120 ORTHO05D009410 7.1e-09 65.5 235 29.4
Os02g0469000 Oryza sativa ssp. japonica HOM05D000120 ORTHO05D009410 9.3e-09 65.1 267 25.5
FAN15G0678 Fragaria x ananassa HOM05D000722 ORTHO05D000590 3.5e-08 63.2 107 36.4
Aa31LG6G16270 Aethionema arabicum HOM05D011065 ORTHO05D009410 2.3e-07 60.5 267 28.5
SalBow6G2916 Salvia bowleyana HOM05D000120 ORTHO05D009410 5.1e-07 59.3 306 24.2
unitig_747.g21207 Utricularia gibba HOM05D000120 ORTHO05D009410 2.5e-06 57.0 260 28.5
CAN.G170.96 Capsicum annuum HOM05D000120 ORTHO05D009410 3.3e-06 56.6 264 28.4
Sabra04G0109000 Salix brachista HOM05D000120 ORTHO05D009410 7.4e-06 55.5 53 58.5
BcaC01g00270 Brassica carinata HOM05D011065 ORTHO05D009410 9.6e-06 55.1 263 27.4
C03p77470 Brassica napus HOM05D011065 ORTHO05D009410 9.6e-06 55.1 263 27.4
BolC3t20002H Brassica oleracea HOM05D011065 ORTHO05D009410 9.6e-06 55.1 263 27.4


User provided reference genes

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