Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G31501 Trifolium pratense HOM05D005630 ORTHO05D006979 7.8e-74 280.4 146 100.0
Ca_08945_v3 Cicer arietinum L. HOM05D005630 ORTHO05D006979 2.4e-62 242.3 148 87.8
Psat3g037680 Pisum sativum HOM05D005630 ORTHO05D006979 1.5e-61 239.6 148 87.8
Medtr6g088605 Medicago truncatula HOM05D005630 ORTHO05D006979 2.6e-61 238.8 148 82.4
TPR.G21379 Trifolium pratense HOM05D005630 ORTHO05D006979 1.4e-59 233.0 127 89.8
Medtr7g103190 Medicago truncatula HOM05D005630 ORTHO05D006979 1.9e-59 232.6 145 84.1
Lj2g0025219 Lotus japonicus HOM05D005630 ORTHO05D006979 5.3e-54 214.5 150 74.7
Lj3g0020108 Lotus japonicus HOM05D005630 ORTHO05D006979 2.2e-52 209.1 152 71.1
Lalb_Chr01g0020901 Lupinus albus HOM05D005630 ORTHO05D006979 8.4e-52 207.2 143 75.5
Glyma.01G008800 Glycine max HOM05D005630 ORTHO05D006979 1.4e-51 206.5 141 74.5
Glyma.16G077600 Glycine max HOM05D005630 ORTHO05D006979 1.9e-51 206.1 141 73.8
Psat5g026240 Pisum sativum HOM05D005630 ORTHO05D006979 4.2e-51 204.9 149 80.5
VMungo0464G1149 Vigna mungo HOM05D005630 ORTHO05D006979 1.6e-50 203.0 146 73.3
VMungo0464G1592 Vigna mungo HOM05D005630 ORTHO05D006979 3.5e-50 201.8 145 73.1
Phvul.004G170400 Phaseolus vulgaris HOM05D005630 ORTHO05D006979 1.9e-48 196.1 146 71.9
TAR383G0582 Trochodendron aralioides HOM05D005630 ORTHO05D006979 9.6e-48 193.7 119 75.6
CANSAT11G0524 Cannabis sativa HOM05D005630 ORTHO05D006979 1.6e-47 193.0 147 67.3
Cfa020874 Carpinus fangiana HOM05D005630 ORTHO05D006979 1.6e-47 193.0 147 69.4
ClCG10G005100 Citrullus lanatus HOM05D005630 ORTHO05D006979 8.2e-47 190.7 149 69.1
Sed0022514 Sechium edule HOM05D005630 ORTHO05D006979 1.8e-46 189.5 150 68.7
CiPaw.04G061600 Carya illinoinensis HOM05D005630 ORTHO05D006979 3.1e-46 188.7 128 73.4
Potri.018G113200 Populus trichocarpa HOM05D005630 ORTHO05D006979 3.1e-46 188.7 121 72.7
Prupe.3G048400 Prunus persica HOM05D005630 ORTHO05D006979 6.9e-46 187.6 127 71.7
arahy.Tifrunner.gnm1.ann1.N9H741 Arachis hypogaea HOM05D005630 ORTHO05D006979 2.0e-45 186.0 143 69.9
QL02p091555 Quercus lobata HOM05D005630 ORTHO05D006979 2.0e-45 186.0 151 68.9
Sc08g0004950 Simmondsia chinensis HOM05D005630 ORTHO05D006979 2.6e-45 185.7 128 68.8
TWI34G2008 Tripterygium wilfordii HOM05D005630 ORTHO05D006979 4.5e-45 184.9 128 69.5
PGR142G4039 Punica granatum HOM05D005630 ORTHO05D006979 1.3e-44 183.3 126 69.0
Actinidia03956 Actinidia chinensis HOM05D005630 ORTHO05D006979 1.7e-44 183.0 147 65.3
Haze_19305 Corylus avellana HOM05D005630 ORTHO05D006979 2.2e-44 182.6 142 68.3
Eucgr.H01228 Eucalyptus grandis HOM05D005630 ORTHO05D006979 2.9e-44 182.2 151 66.9
Eucgr.H01921 Eucalyptus grandis HOM05D005630 ORTHO05D006979 2.9e-44 182.2 151 66.9
Prupe.7G253200 Prunus persica HOM05D005630 ORTHO05D006979 2.9e-44 182.2 109 76.1
Atru.chr7.200 Acer truncatum HOM05D005630 ORTHO05D006979 3.8e-44 181.8 145 61.4
Gohir.A05G280400 Gossypium hirsutum HOM05D005630 ORTHO05D006979 3.8e-44 181.8 117 72.6
Gohir.D05G282200 Gossypium hirsutum HOM05D005630 ORTHO05D006979 3.8e-44 181.8 117 72.6
Gorai.009G295600 Gossypium raimondii HOM05D005630 ORTHO05D006979 3.8e-44 181.8 117 72.6
MD02G1012200 Malus domestica HOM05D005630 ORTHO05D006979 3.8e-44 181.8 143 64.3
RcHm_v2.0_Chr2g0086501 Rosa chinensis HOM05D005630 ORTHO05D006979 3.8e-44 181.8 150 64.0
GSVIVG01001041001 Vitis vinifera HOM05D005630 ORTHO05D006979 3.8e-44 181.8 138 71.0
Duzib128G0941 Durio zibethinus HOM05D005630 ORTHO05D006979 6.5e-44 181.0 128 68.0
Oeu028785.1 Olea europaea HOM05D005630 ORTHO05D006979 8.4e-44 180.6 149 65.1
CSS0013521 Camellia sinensis var. sinensis HOM05D005630 ORTHO05D006979 1.1e-43 180.3 126 67.5
Nn8g40117 Nelumbo nucifera HOM05D005630 ORTHO05D006979 1.1e-43 180.3 118 72.0
Hma1.2p1_1164F.1_g262820 Hydrangea macrophylla HOM05D005630 ORTHO05D006979 1.4e-43 179.9 144 66.0
Rhsim03G0057400 Rhododendron simsii HOM05D005630 ORTHO05D006979 2.5e-43 179.1 118 71.2
COL.COLO4_35448 Corchorus olitorius HOM05D000321 ORTHO05D000204 3.2e-43 178.7 120 68.3
FvH4_1g01540 Fragaria vesca HOM05D005630 ORTHO05D006979 5.5e-43 177.9 118 69.5
FAN28G1107 Fragaria x ananassa HOM05D005630 ORTHO05D006979 5.5e-43 177.9 118 69.5
Manes.03G015700 Manihot esculenta HOM05D005630 ORTHO05D006979 7.1e-43 177.6 124 66.9
Nitab4.5_0000914g0010 Nicotiana tabacum HOM05D005630 ORTHO05D006979 1.2e-42 176.8 120 67.5
Solyc05g054990.3 Solanum lycopersicum HOM05D005630 ORTHO05D006979 1.2e-42 176.8 151 62.3
BcaC05g28577 Brassica carinata HOM05D005630 ORTHO05D006979 2.1e-42 176.0 108 75.9
C05p46800 Brassica napus HOM05D005630 ORTHO05D006979 2.1e-42 176.0 108 75.9
BolC5t33410H Brassica oleracea HOM05D005630 ORTHO05D006979 2.1e-42 176.0 108 75.9
A05p30870 Brassica napus HOM05D005630 ORTHO05D006979 2.7e-42 175.6 108 75.9
BraA05t21929Z Brassica rapa HOM05D005630 ORTHO05D006979 2.7e-42 175.6 108 75.9
FAN26G1041 Fragaria x ananassa HOM05D005630 ORTHO05D006979 2.7e-42 175.6 118 67.8
PGSC0003DMG400023408 Solanum tuberosum HOM05D005630 ORTHO05D006979 2.7e-42 175.6 148 62.8
EL10Ac4g09637 Beta vulgaris HOM05D005630 ORTHO05D006979 4.6e-42 174.9 146 59.6
BolC3t17269H Brassica oleracea HOM05D005630 ORTHO05D006979 4.6e-42 174.9 108 75.0
BcaB04g19003 Brassica carinata HOM05D005630 ORTHO05D006979 6.0e-42 174.5 108 75.0
C03p49710 Brassica napus HOM05D005630 ORTHO05D006979 6.0e-42 174.5 108 75.0
Lsat_1_v5_gn_5_90640 Lactuca sativa HOM05D005630 ORTHO05D006979 6.0e-42 174.5 120 68.3
BcaB06g25926 Brassica carinata HOM05D005630 ORTHO05D006979 1.0e-41 173.7 131 67.2
Sopen05g033450 Solanum pennellii HOM05D005630 ORTHO05D006979 1.0e-41 173.7 151 61.6
MD15G1158000 Malus domestica HOM05D005630 ORTHO05D006979 1.3e-41 173.3 111 72.1
Sp3g16800 Schrenkiella parvula HOM05D005630 ORTHO05D006979 1.3e-41 173.3 130 66.2
CsaV3_3G004770 Cucumis sativus L. HOM05D005630 ORTHO05D006979 1.8e-41 172.9 127 68.5
THA.LOC104826572 Tarenaya hassleriana HOM05D005630 ORTHO05D006979 1.8e-41 172.9 147 59.2
BraA03t13240Z Brassica rapa HOM05D005630 ORTHO05D006979 3.0e-41 172.2 108 73.1
CARHR094150 Cardamine hirsuta HOM05D005630 ORTHO05D006979 3.0e-41 172.2 108 73.1
Nitab4.5_0002880g0080 Nicotiana tabacum HOM05D005630 ORTHO05D006979 3.0e-41 172.2 145 62.8
Aa31LG8G5570 Aethionema arabicum HOM05D005630 ORTHO05D006979 5.1e-41 171.4 121 66.9
Peaxi162Scf00083g01117 Petunia axillaris HOM05D005630 ORTHO05D006979 6.7e-41 171.0 126 62.7
Thhalv10021733m.g Eutrema salsugineum HOM05D005630 ORTHO05D006979 8.7e-41 170.6 131 63.4
Nitab4.5_0005975g0020 Nicotiana tabacum HOM05D005630 ORTHO05D006979 8.7e-41 170.6 147 59.2
AT3G18760 Arabidopsis thaliana HOM05D005630 ORTHO05D006979 1.1e-40 170.2 108 72.2
AL3G32110 Arabidopsis lyrata HOM05D005630 ORTHO05D006979 1.9e-40 169.5 102 75.5
MSTRG.19630 Avicennia marina HOM05D005630 ORTHO05D006979 1.9e-40 169.5 142 61.3
Sopen02g029090 Solanum pennellii HOM05D005630 ORTHO05D006979 1.9e-40 169.5 120 65.0
Carub.0003s1855 Capsella rubella HOM05D005630 ORTHO05D006979 2.5e-40 169.1 108 72.2
Nitab4.5_0003965g0050 Nicotiana tabacum HOM05D005630 ORTHO05D006979 2.5e-40 169.1 120 64.2
Actinidia37787 Actinidia chinensis HOM05D005630 ORTHO05D006979 3.3e-40 168.7 143 65.7
MELO3C014176.2 Cucumis melo HOM05D005630 ORTHO05D006979 4.3e-40 168.3 152 61.8
HanXRQChr10g0314501 Helianthus annuus HOM05D005630 ORTHO05D006979 5.7e-40 167.9 131 59.5
Solyc02g084380.3 Solanum lycopersicum HOM05D005630 ORTHO05D006979 5.7e-40 167.9 120 65.0
THA.LOC104815401 Tarenaya hassleriana HOM05D005630 ORTHO05D006979 7.4e-40 167.5 109 69.7
ECA234G3390 Erigeron canadensis HOM05D000399 ORTHO05D000304 1.6e-39 166.4 109 70.6
Cc06_g16720 Coffea canephora HOM05D005630 ORTHO05D006979 2.2e-39 166.0 126 64.3
CAN.G1465.11 Capsicum annuum HOM05D005630 ORTHO05D006979 2.8e-39 165.6 145 61.4
CAN.G1505.19 Capsicum annuum HOM05D005630 ORTHO05D006979 1.1e-38 163.7 146 60.3
Migut.J01281 Erythranthe guttata HOM05D005630 ORTHO05D006979 3.1e-38 162.2 126 61.9
SalBow1G1736 Salvia bowleyana HOM05D005630 ORTHO05D006979 4.1e-38 161.8 102 70.6
DCAR_019353 Daucus carota HOM05D000452 ORTHO05D000647 5.3e-38 161.4 112 65.2
PSO210G0346 Papaver somniferum HOM05D005630 ORTHO05D006979 6.9e-38 161.0 104 71.2
PSO210G6044 Papaver somniferum HOM05D005630 ORTHO05D006979 6.9e-38 161.0 104 71.2
vmacro07529 Vaccinium macrocarpon HOM05D005630 ORTHO05D006979 9.0e-38 160.6 100 72.0
unitig_46.g18303 Utricularia gibba HOM05D005630 ORTHO05D006979 2.0e-37 159.5 120 61.7
SGA_v2.0_scaffold336G49163 Striga asiatica HOM05D005630 ORTHO05D006979 2.6e-37 159.1 123 63.4
Thecc.10G171800 Theobroma cacao HOM05D005630 ORTHO05D006979 2.6e-37 159.1 98 73.5
Ciclev10009802m.g Citrus clementina HOM05D005630 ORTHO05D006979 4.5e-37 158.3 143 58.0
A03p40820 Brassica napus HOM05D005630 ORTHO05D006979 5.9e-37 157.9 132 62.9
FAN23G2038 Fragaria x ananassa HOM05D005630 ORTHO05D006979 5.9e-37 157.9 169 49.1
unitig_46.g18374 Utricularia gibba HOM05D005736 ORTHO05D007215 5.0e-36 154.8 120 60.8
Dinv41416 Davidia involucrata HOM05D005630 ORTHO05D006979 6.5e-36 154.5 123 62.6
Os01g0220300 Oryza sativa ssp. japonica HOM05D005630 ORTHO05D006979 1.1e-35 153.7 125 57.6
Zm00001eb119770 Zea mays HOM05D005630 ORTHO05D006979 4.2e-35 151.8 139 55.4
HPP92_008634 Vanilla planifolia HOM05D005630 ORTHO05D006979 7.9e-34 147.5 118 56.8
Oeu040774.1 Olea europaea HOM05D005630 ORTHO05D006979 3.0e-33 145.6 169 48.5
FAN19G2317 Fragaria x ananassa HOM05D005630 ORTHO05D006979 1.7e-31 139.8 118 58.5
Ah.01g003710 Amaranthus hybridus HOM05D005630 ORTHO05D006979 2.8e-31 139.0 106 61.3
MBI07_g35858_MAGBIO Magnolia biondii HOM05D005630 ORTHO05D006979 2.8e-31 139.0 87 72.4
CDE02G3819 Ceratophyllum demersum HOM05D005630 ORTHO05D006979 9.1e-30 134.0 84 70.2
unitig_48.g30288 Utricularia gibba HOM05D005630 ORTHO05D006979 5.0e-28 128.3 98 61.2
Eucgr.B02192 Eucalyptus grandis HOM05D005630 ORTHO05D006979 1.2e-26 123.6 76 72.4
Pp3c3_21570 Physcomitrium patens HOM05D005630 ORTHO05D006979 1.5e-24 116.7 101 48.5
AagrBONN_evm.TU.Sc2ySwM_117.2919 Anthoceros agrestis HOM05D005630 ORTHO05D006979 1.7e-23 113.2 101 48.5
SMO146G0230 Selaginella moellendorffii HOM05D005630 ORTHO05D006979 4.1e-22 108.6 101 47.5
TPR.G10852 Trifolium pratense HOM05D005630 ORTHO05D006979 1.0e-20 104.0 49 100.0
Lj7A451T27 Lonicera japonica HOM05D005630 ORTHO05D006979 3.8e-20 102.1 61 75.4
Mapoly0179s0002 Marchantia polymorpha HOM05D005630 ORTHO05D006979 1.9e-19 99.8 101 43.6
SGA_v2.0_scaffold416G51224 Striga asiatica HOM05D005630 ORTHO05D006979 1.9e-19 99.8 61 73.8
CBR_g37184 Chara braunii HOM05D005630 ORTHO05D006979 2.7e-18 95.9 118 41.5
AUR62001080 Chenopodium quinoa HOM05D005630 ORTHO05D006979 2.3e-17 92.8 61 65.6
Cpa.g.sc20.36 Carica papaya HOM05D005630 ORTHO05D006979 1.7e-15 86.7 107 50.5
AUR62004880 Chenopodium quinoa HOM05D005630 ORTHO05D006979 2.8e-15 85.9 61 60.7
Eucgr.L01073 Eucalyptus grandis HOM05D005630 ORTHO05D006979 4.8e-15 85.1 92 58.7
ATR1096G006 Amborella trichopoda HOM05D005630 ORTHO05D006979 1.1e-14 84.0 51 72.5
SEGI_16423 Sequoiadendron giganteum HOM05D005630 ORTHO05D006979 2.4e-14 82.8 85 44.7
Nn2g11495 Nelumbo nucifera HOM05D005630 ORTHO05D006979 1.7e-12 76.6 54 66.7
MBI07_g26347_MAGBIO Magnolia biondii HOM05D005630 ORTHO05D006979 8.5e-12 74.3 49 65.3
Medtr5g037160 Medicago truncatula HOM05D005630 ORTHO05D000782 1.1e-11 73.9 39 89.7
MD16G1239100 Malus domestica HOM05D005630 ORTHO05D006979 4.2e-11 72.0 57 54.4
AUR62039003 Chenopodium quinoa HOM05D005630 ORTHO05D006979 3.3e-08 62.4 47 53.2
Cre12.g558000 Chlamydomonas reinhardtii HOM05D005630 ORTHO05D006979 5.7e-08 61.6 97 29.9
MCO04G088 Micromonas commoda HOM05D005630 ORTHO05D006979 2.8e-07 59.3 95 26.3
SalBow1G6627 Salvia bowleyana HOM05D005630 ORTHO05D006979 9.1e-06 54.3 36 63.9


User provided reference genes

Program Settings