Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G31441 Trifolium pratense HOM05D000045 ORTHO05D000611 6.9e-43 176.8 83 100.0
TPR.G39876 Trifolium pratense HOM05D000045 ORTHO05D000067 2.3e-22 108.6 61 78.7
TPR.G19376 Trifolium pratense HOM05D000045 ORTHO05D000611 3.0e-22 108.2 61 78.7
TPR.G39279 Trifolium pratense HOM05D000045 ORTHO05D000067 7.0e-19 97.1 60 71.7
Lj4g0018346 Lotus japonicus HOM05D000439 ORTHO05D002302 1.8e-14 82.4 60 60.0
TPR.G34153 Trifolium pratense HOM05D000045 ORTHO05D000067 2.6e-13 78.6 73 49.3
TPR.G23616 Trifolium pratense HOM05D000045 ORTHO05D000067 1.1e-11 73.2 75 49.3
Medtr4g102720 Medicago truncatula HOM05D000045 ORTHO05D000611 1.8e-11 72.4 62 54.8
TPR.G9806 Trifolium pratense HOM05D000045 ORTHO05D000067 2.4e-11 72.0 74 43.2
AUR62017476 Chenopodium quinoa HOM05D000045 ORTHO05D000611 7.0e-11 70.5 74 43.2
TPR.G22307 Trifolium pratense HOM05D000045 ORTHO05D000067 5.9e-10 67.4 75 45.3
Lj1g0012784 Lotus japonicus HOM05D000045 ORTHO05D000067 1.7e-09 65.9 60 48.3
EL10Ac7g17614 Beta vulgaris HOM05D000045 ORTHO05D000611 3.8e-09 64.7 82 41.5
EL10Ac6g13904 Beta vulgaris HOM05D000045 ORTHO05D000611 6.5e-09 63.9 74 41.9
TPR.G35603 Trifolium pratense HOM05D000045 ORTHO05D000067 1.1e-08 63.2 81 40.7
Os10g0571900 Oryza sativa ssp. japonica HOM05D000045 ORTHO05D000067 1.9e-08 62.4 82 39.0
TWI56G0528 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 3.2e-08 61.6 59 50.8
QL04p086330 Quercus lobata HOM05D000045 ORTHO05D000611 4.2e-08 61.2 81 40.7
QL04p064028 Quercus lobata HOM05D000045 ORTHO05D000067 9.4e-08 60.1 76 44.7
QL07p011111 Quercus lobata HOM05D000045 ORTHO05D000067 9.4e-08 60.1 76 44.7
CSS0021123 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.2e-07 59.7 57 54.4
TWI73G0928 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 1.2e-07 59.7 63 41.3
CSS0016639 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.6e-07 59.3 57 52.6
CSS0011546 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.1e-07 58.9 57 52.6
EL10Ac6g14532 Beta vulgaris HOM05D000045 ORTHO05D000067 2.7e-07 58.5 73 38.4
QL03p019210 Quercus lobata HOM05D000045 ORTHO05D000611 2.7e-07 58.5 76 43.4
QL06p039874 Quercus lobata HOM05D000045 ORTHO05D000611 2.7e-07 58.5 76 43.4
Medtr7g061980 Medicago truncatula HOM05D000045 ORTHO05D000611 3.6e-07 58.2 60 45.0
CiPaw.13G057900 Carya illinoinensis HOM05D000045 ORTHO05D000611 4.7e-07 57.8 63 47.6
CSS0041074 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 6.1e-07 57.4 57 52.6
Lj2g0023561 Lotus japonicus HOM05D000045 ORTHO05D000067 8.0e-07 57.0 74 41.9
QL03p055126 Quercus lobata HOM05D000045 ORTHO05D000611 1.0e-06 56.6 81 42.0
TWI34G1179 Tripterygium wilfordii HOM05D000045 ORTHO05D000611 1.0e-06 56.6 77 40.3
Duzib147G0739 Durio zibethinus HOM05D000045 ORTHO05D000067 3.0e-06 55.1 74 37.8
Medtr5g039760 Medicago truncatula HOM05D000045 ORTHO05D000067 3.0e-06 55.1 58 48.3
CSS0035306 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 4.0e-06 54.7 57 49.1
CiPaw.04G032300 Carya illinoinensis HOM05D000045 ORTHO05D000067 4.0e-06 54.7 74 39.2
CSS0017425 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 5.2e-06 54.3 73 39.7
CSS0045912 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 5.2e-06 54.3 73 39.7
Rhsim08G0046500 Rhododendron simsii HOM05D000045 ORTHO05D000067 6.8e-06 53.9 74 37.8
TWI34G0702 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 6.8e-06 53.9 77 37.7
CSS0018197 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 8.8e-06 53.5 57 47.4
CANSAT64G1822 Cannabis sativa HOM05D000045 ORTHO05D000067 8.8e-06 53.5 74 37.8
Ciclev10014295m.g Citrus clementina HOM05D000045 ORTHO05D000067 8.8e-06 53.5 74 37.8
Gorai.006G037100 Gossypium raimondii HOM05D000045 ORTHO05D000067 8.8e-06 53.5 74 36.5
QL02p073271 Quercus lobata HOM05D000045 ORTHO05D000067 8.8e-06 53.5 74 37.8
Thecc.04G026200 Theobroma cacao HOM05D000045 ORTHO05D000067 8.8e-06 53.5 74 37.8


User provided reference genes

Program Settings