Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G31382 Trifolium pratense HOM05D005256 ORTHO05D006491 4.4e-97 358.2 218 100.0
Medtr2g437530 Medicago truncatula HOM05D005256 ORTHO05D006491 2.6e-73 279.3 222 73.9
Psat1g152160 Pisum sativum HOM05D005256 ORTHO05D006491 1.1e-63 247.3 157 86.0
Ca_02405_v3 Cicer arietinum L. HOM05D005256 ORTHO05D006491 1.3e-61 240.4 208 70.7
Lalb_Chr18g0051841 Lupinus albus HOM05D005256 ORTHO05D006491 1.2e-57 227.3 162 77.2
Glyma.09G047200 Glycine max HOM05D005256 ORTHO05D006491 7.1e-55 218.0 147 81.0
Glyma.15G154700 Glycine max HOM05D005256 ORTHO05D006491 1.2e-54 217.2 147 81.0
Phvul.009G245700 Phaseolus vulgaris HOM05D005256 ORTHO05D006491 1.0e-53 214.2 159 74.8
Lj6g0014214 Lotus japonicus HOM05D005256 ORTHO05D006491 1.3e-53 213.8 146 77.4
QL11p010746 Quercus lobata HOM05D005256 ORTHO05D006491 2.5e-52 209.5 158 74.1
Atru.chr10.203 Acer truncatum HOM05D005256 ORTHO05D006491 3.3e-52 209.1 167 71.9
Nn1g09867 Nelumbo nucifera HOM05D005256 ORTHO05D006491 1.3e-51 207.2 138 77.5
arahy.Tifrunner.gnm1.ann1.QDE700 Arachis hypogaea HOM05D005256 ORTHO05D006491 2.1e-51 206.5 140 77.9
TWI63G0333 Tripterygium wilfordii HOM05D005256 ORTHO05D006491 1.1e-50 204.1 218 60.1
Lalb_Chr15g0083621 Lupinus albus HOM05D005256 ORTHO05D006491 1.4e-50 203.8 137 78.1
TAR624G1249 Trochodendron aralioides HOM05D005256 ORTHO05D006491 1.4e-50 203.8 160 70.0
MD10G1224100 Malus domestica HOM05D005256 ORTHO05D006491 3.1e-50 202.6 155 72.9
Sabra03G0114000 Salix brachista HOM05D005256 ORTHO05D006491 4.0e-50 202.2 192 68.2
arahy.Tifrunner.gnm1.ann1.98CSRD Arachis hypogaea HOM05D005256 ORTHO05D006491 1.5e-49 200.3 135 78.5
EL10Ac7g17298 Beta vulgaris HOM05D005256 ORTHO05D006491 1.5e-49 200.3 165 67.9
Haze_05185 Corylus avellana HOM05D005256 ORTHO05D006491 2.6e-49 199.5 200 65.0
Sabra01G0052200 Salix brachista HOM05D005256 ORTHO05D006491 3.4e-49 199.1 148 75.0
Ciclev10016618m.g Citrus clementina HOM05D005256 ORTHO05D006491 7.6e-49 198.0 140 77.1
Potri.001G073900 Populus trichocarpa HOM05D005256 ORTHO05D006491 7.6e-49 198.0 205 60.0
Potri.003G157100 Populus trichocarpa HOM05D005256 ORTHO05D006491 7.6e-49 198.0 163 68.1
VMungo1309G1298 Vigna mungo HOM05D005256 ORTHO05D006491 1.0e-48 197.6 134 78.4
MD05G1242300 Malus domestica HOM05D005256 ORTHO05D006491 1.3e-48 197.2 145 74.5
CiPaw.09G140800 Carya illinoinensis HOM05D005256 ORTHO05D006491 6.5e-48 194.9 137 75.9
Eucgr.D00001 Eucalyptus grandis HOM05D005256 ORTHO05D006491 6.5e-48 194.9 149 71.8
Oeu005126.1 Olea europaea HOM05D005256 ORTHO05D006491 1.1e-47 194.1 165 66.7
Dinv07938 Davidia involucrata HOM05D005256 ORTHO05D006491 1.4e-47 193.7 140 73.6
Dinv18415 Davidia involucrata HOM05D005256 ORTHO05D006491 1.4e-47 193.7 140 73.6
Lsat_1_v5_gn_2_59820 Lactuca sativa HOM05D005256 ORTHO05D006491 1.4e-47 193.7 189 59.8
MBI07_g44405_MAGBIO Magnolia biondii HOM05D005256 ORTHO05D006491 1.4e-47 193.7 158 69.0
CSS0003949 Camellia sinensis var. sinensis HOM05D005256 ORTHO05D006491 9.3e-47 191.0 134 74.6
GSVIVG01001340001 Vitis vinifera HOM05D005256 ORTHO05D006491 9.3e-47 191.0 138 73.9
Hma1.2p1_0082F.1_g042560 Hydrangea macrophylla HOM05D005256 ORTHO05D006491 1.2e-46 190.7 159 67.3
FAN11G1371 Fragaria x ananassa HOM05D005256 ORTHO05D006491 1.6e-46 190.3 155 67.7
Prupe.4G121100 Prunus persica HOM05D005256 ORTHO05D006491 1.6e-46 190.3 135 75.6
TAR626G1126 Trochodendron aralioides HOM05D005256 ORTHO05D006491 2.1e-46 189.9 131 75.6
PGSC0003DMG400011293 Solanum tuberosum HOM05D005256 ORTHO05D006491 2.7e-46 189.5 163 64.4
Sopen10g001120 Solanum pennellii HOM05D005256 ORTHO05D006491 3.5e-46 189.1 220 54.1
vmacro03574 Vaccinium macrocarpon HOM05D005256 ORTHO05D006491 6.0e-46 188.3 138 72.5
CSS0021462 Camellia sinensis var. sinensis HOM05D005256 ORTHO05D006491 1.0e-45 187.6 143 69.9
FAN21G0853 Fragaria x ananassa HOM05D005256 ORTHO05D006491 1.3e-45 187.2 154 66.9
Oeu052922.1 Olea europaea HOM05D005256 ORTHO05D006491 1.8e-45 186.8 207 52.2
Rhsim13G0136300 Rhododendron simsii HOM05D005256 ORTHO05D006491 2.3e-45 186.4 216 56.9
RcHm_v2.0_Chr5g0022081 Rosa chinensis HOM05D005256 ORTHO05D006491 3.0e-45 186.0 152 69.1
CARHR227090 Cardamine hirsuta HOM05D005256 ORTHO05D006491 3.9e-45 185.7 166 62.0
Manes.16G060225 Manihot esculenta HOM05D005256 ORTHO05D006491 3.9e-45 185.7 133 72.9
Peaxi162Scf00888g00114 Petunia axillaris HOM05D005256 ORTHO05D006491 3.9e-45 185.7 139 69.1
FvH4_3g13370 Fragaria vesca HOM05D005256 ORTHO05D006491 6.7e-45 184.9 152 67.1
FAN16G0515 Fragaria x ananassa HOM05D005256 ORTHO05D006491 1.1e-44 184.1 139 70.5
Solyc10g005100.3 Solanum lycopersicum HOM05D005256 ORTHO05D006491 1.1e-44 184.1 200 59.0
Nitab4.5_0004778g0020 Nicotiana tabacum HOM05D005256 ORTHO05D006491 1.5e-44 183.7 139 68.3
FAN25G1093 Fragaria x ananassa HOM05D005256 ORTHO05D006491 1.9e-44 183.3 153 66.0
CAN.G465.5 Capsicum annuum HOM05D005256 ORTHO05D006491 2.5e-44 183.0 174 59.8
AL7G33640 Arabidopsis lyrata HOM05D005256 ORTHO05D006491 1.3e-43 180.6 148 64.9
Hund20133 Selenicereus undatus HOM05D005256 ORTHO05D006491 1.6e-43 180.3 163 62.0
Aa31LG6G2690 Aethionema arabicum HOM05D005256 ORTHO05D006491 4.8e-43 178.7 166 58.4
Ah.15g091820 Amaranthus hybridus HOM05D005256 ORTHO05D006491 1.1e-42 177.6 157 62.4
AT4G20260 Arabidopsis thaliana HOM05D005256 ORTHO05D006491 1.4e-42 177.2 172 60.5
Sc17g0004300 Simmondsia chinensis HOM05D005256 ORTHO05D006491 1.4e-42 177.2 152 65.1
AUR62040985 Chenopodium quinoa HOM05D005256 ORTHO05D006491 1.8e-42 176.8 203 57.6
ATR0737G015 Amborella trichopoda HOM05D005256 ORTHO05D006491 3.1e-42 176.0 161 64.0
Cpa.g.sc30.65 Carica papaya HOM05D005256 ORTHO05D006491 4.1e-42 175.6 160 60.6
CANSAT35G0328 Cannabis sativa HOM05D005256 ORTHO05D006491 6.9e-42 174.9 138 65.9
THA.LOC104812925 Tarenaya hassleriana HOM05D005256 ORTHO05D006491 9.0e-42 174.5 148 64.2
Thhalv10026094m.g Eutrema salsugineum HOM05D005256 ORTHO05D006491 1.5e-41 173.7 176 57.4
CiPaw.10G108500 Carya illinoinensis HOM05D005256 ORTHO05D006491 2.6e-41 172.9 137 69.3
FAN25G0981 Fragaria x ananassa HOM05D005256 ORTHO05D006491 5.9e-41 171.8 153 64.7
CDE10G0480 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 1.0e-40 171.0 135 66.7
PSO541G2657 Papaver somniferum HOM05D005256 ORTHO05D006491 1.0e-40 171.0 148 64.2
BcaC09g51326 Brassica carinata HOM05D005256 ORTHO05D006491 1.3e-40 170.6 172 57.6
C01p14230 Brassica napus HOM05D005256 ORTHO05D006491 1.3e-40 170.6 172 57.6
BolC1t01388H Brassica oleracea HOM05D005256 ORTHO05D006491 1.3e-40 170.6 172 57.6
A01p11960 Brassica napus HOM05D005256 ORTHO05D006491 1.7e-40 170.2 178 56.2
ECA238G2220 Erigeron canadensis HOM05D005256 ORTHO05D006491 2.9e-40 169.5 131 70.2
Lsat_1_v5_gn_8_107621 Lactuca sativa HOM05D005256 ORTHO05D006491 2.9e-40 169.5 131 66.4
THA.LOC104811953 Tarenaya hassleriana HOM05D005256 ORTHO05D006491 3.8e-40 169.1 171 57.9
COL.COLO4_25022 Corchorus olitorius HOM05D005256 ORTHO05D006491 5.0e-40 168.7 133 69.2
HanXRQChr14g0439031 Helianthus annuus HOM05D005256 ORTHO05D006491 5.0e-40 168.7 154 61.7
CDE10G1097 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 8.5e-40 167.9 135 65.9
PSO675G8904 Papaver somniferum HOM05D005256 ORTHO05D006491 8.5e-40 167.9 148 62.8
MBI06_g04184_MAGBIO Magnolia biondii HOM05D005256 ORTHO05D006491 1.1e-39 167.5 201 56.7
MSTRG.14820 Avicennia marina HOM05D005256 ORTHO05D006491 1.4e-39 167.2 156 62.8
BcaC06g30648 Brassica carinata HOM05D005256 ORTHO05D006491 1.4e-39 167.2 172 55.8
Cc09_g04590 Coffea canephora HOM05D005256 ORTHO05D006491 2.5e-39 166.4 219 50.7
BraA01t01138Z Brassica rapa HOM05D005256 ORTHO05D006491 3.2e-39 166.0 184 53.8
CDE02G1470 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 4.2e-39 165.6 137 65.7
Sp7g18620 Schrenkiella parvula HOM05D005256 ORTHO05D006491 4.2e-39 165.6 184 53.8
C07p50830 Brassica napus HOM05D005256 ORTHO05D006491 5.5e-39 165.2 164 57.3
BolC7t45581H Brassica oleracea HOM05D005256 ORTHO05D006491 5.5e-39 165.2 142 60.6
HPP92_008810 Vanilla planifolia HOM05D005256 ORTHO05D006491 9.3e-39 164.5 130 70.0
A03p52380 Brassica napus HOM05D005256 ORTHO05D006491 1.2e-38 164.1 142 59.9
Peaxi162Scf01310g00311 Petunia axillaris HOM05D005256 ORTHO05D006491 1.2e-38 164.1 137 65.7
Carub.0007s2091 Capsella rubella HOM05D005256 ORTHO05D006491 1.6e-38 163.7 173 52.6
BcaNung03497 Brassica carinata HOM05D005256 ORTHO05D006491 2.7e-38 162.9 142 59.9
BraA03t14315Z Brassica rapa HOM05D005256 ORTHO05D006491 3.6e-38 162.5 142 58.5
HanXRQChr15g0487481 Helianthus annuus HOM05D005256 ORTHO05D006491 1.3e-37 160.6 131 63.4
SalBow7G1744 Salvia bowleyana HOM05D005256 ORTHO05D006491 1.3e-37 160.6 165 55.2
ECA232G1901 Erigeron canadensis HOM05D005256 ORTHO05D006491 2.3e-37 159.8 131 64.9
Migut.L00006 Erythranthe guttata HOM05D005256 ORTHO05D006491 1.9e-36 156.8 131 64.9
Thecc.02G000700 Theobroma cacao HOM05D005256 ORTHO05D006491 1.9e-36 156.8 126 65.1
Aa31LG9G8540 Aethionema arabicum HOM05D005256 ORTHO05D006491 6.3e-35 151.8 194 49.5
CDE09G1225 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 1.1e-34 151.0 176 52.8
A06p47070 Brassica napus HOM05D005256 ORTHO05D006491 1.2e-33 147.5 170 54.7
BraA06t27579Z Brassica rapa HOM05D005256 ORTHO05D006491 1.2e-33 147.5 170 54.7
BcaNung03716 Brassica carinata HOM05D005256 ORTHO05D006491 2.0e-33 146.7 138 58.7
C07p27480 Brassica napus HOM05D005256 ORTHO05D006491 2.6e-33 146.4 170 54.1
BcaB07g30517 Brassica carinata HOM05D005256 ORTHO05D006491 5.9e-33 145.2 211 46.9
BcaC06g34533 Brassica carinata HOM05D005256 ORTHO05D006491 7.7e-33 144.8 170 53.5
BolC7t43278H Brassica oleracea HOM05D005256 ORTHO05D006491 1.3e-32 144.1 170 53.5
BcaC04g21824 Brassica carinata HOM05D005256 ORTHO05D006491 3.8e-32 142.5 211 46.0
C09p27010 Brassica napus HOM05D005256 ORTHO05D006491 3.8e-32 142.5 211 46.0
BolC9t55584H Brassica oleracea HOM05D005256 ORTHO05D006491 3.8e-32 142.5 211 46.0
AUR62042105 Chenopodium quinoa HOM05D005256 ORTHO05D006491 3.8e-32 142.5 139 61.2
Os02g0285300 Oryza sativa ssp. japonica HOM05D005256 ORTHO05D006491 6.5e-32 141.7 137 57.7
HanXRQChr09g0257711 Helianthus annuus HOM05D005256 ORTHO05D006491 1.1e-31 141.0 131 56.5
Nitab4.5_0012748g0020 Nicotiana tabacum HOM05D005256 ORTHO05D006491 3.2e-31 139.4 111 64.9
A09p21180 Brassica napus HOM05D005256 ORTHO05D006491 1.2e-30 137.5 152 53.9
BraA09t37724Z Brassica rapa HOM05D005256 ORTHO05D006491 1.2e-30 137.5 152 53.9
BcaB07g30940 Brassica carinata HOM05D005256 ORTHO05D006491 4.6e-30 135.6 165 52.1
Lalb_Chr20g0114421 Lupinus albus HOM05D005256 ORTHO05D006491 1.0e-29 134.4 94 76.6
Nitab4.5_0000217g0040 Nicotiana tabacum HOM05D005256 ORTHO05D006491 1.1e-28 131.0 135 56.3
Sp2g09430 Schrenkiella parvula HOM05D005256 ORTHO05D006491 3.3e-28 129.4 152 52.6
MBI06_g26562_MAGBIO Magnolia biondii HOM05D005256 ORTHO05D006491 3.7e-27 125.9 110 61.8
DCAR_003732 Daucus carota HOM05D005256 ORTHO05D006491 4.8e-27 125.6 131 52.7
BolC2t10548H Brassica oleracea HOM05D005256 ORTHO05D006491 1.8e-26 123.6 203 47.3
C02p45090 Brassica napus HOM05D005256 ORTHO05D006491 4.1e-26 122.5 212 45.3
Nitab4.5_0001253g0020 Nicotiana tabacum HOM05D005256 ORTHO05D006491 3.4e-25 119.4 168 46.4
Zm00001eb339340 Zea mays HOM05D005256 ORTHO05D006491 9.4e-23 111.3 156 48.1
Os01g0233000 Oryza sativa ssp. japonica HOM05D005256 ORTHO05D006491 4.7e-22 109.0 156 48.1
Zm00001eb236850 Zea mays HOM05D005256 ORTHO05D006491 4.7e-22 109.0 115 54.8
Zm00001eb119130 Zea mays HOM05D005256 ORTHO05D006491 3.9e-21 105.9 135 50.4
Lsat_1_v5_gn_9_9820 Lactuca sativa HOM05D005256 ORTHO05D006491 8.2e-19 98.2 139 47.5
SGA_v2.0_scaffold51G18675 Striga asiatica HOM05D003701 ORTHO05D004771 1.4e-13 80.9 68 66.2
Mapoly0087s0006 Marchantia polymorpha HOM05D005256 ORTHO05D006491 1.9e-07 60.5 133 32.3
FvH4_7g19390 Fragaria vesca HOM05D036880 ORTHO05D006491 3.2e-07 59.7 74 41.9


User provided reference genes

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