Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G31352 Trifolium pratense HOM05D004831 ORTHO05D003975 0.0e+00 1585.9 842 100.0
Ca_24215_v3 Cicer arietinum L. HOM05D004831 ORTHO05D003975 5.6e-225 785.0 854 56.7
Medtr8g467560 Medicago truncatula HOM05D004831 ORTHO05D003975 2.5e-217 759.6 852 56.3
Medtr6g068960 Medicago truncatula HOM05D004831 ORTHO05D003975 9.3e-212 741.1 795 58.1
Glyma.13G360700 Glycine max HOM05D004831 ORTHO05D003975 7.7e-174 615.1 865 47.5
Glyma.15G013200 Glycine max HOM05D004831 ORTHO05D003975 5.0e-173 612.5 868 47.7
Lj3g0022365 Lotus japonicus HOM05D004831 ORTHO05D003975 6.1e-163 578.9 845 45.2
Lalb_Chr24g0395761 Lupinus albus HOM05D004831 ORTHO05D003975 9.2e-159 565.1 855 45.6
arahy.Tifrunner.gnm1.ann1.NQW8T9 Arachis hypogaea HOM05D004831 ORTHO05D003975 3.1e-146 523.5 970 40.3
Psat4g139520 Pisum sativum HOM05D004831 ORTHO05D003975 2.0e-145 520.8 729 47.9
Phvul.005G172500 Phaseolus vulgaris HOM05D004831 ORTHO05D003975 9.9e-137 491.9 992 39.9
arahy.Tifrunner.gnm1.ann1.5CE7DY Arachis hypogaea HOM05D004831 ORTHO05D003975 6.0e-134 482.6 872 41.3
Lalb_Chr15g0078831 Lupinus albus HOM05D004831 ORTHO05D003975 1.1e-130 471.9 824 42.1
arahy.Tifrunner.gnm1.ann1.3B4S3M Arachis hypogaea HOM05D004831 ORTHO05D003975 7.9e-110 402.5 808 39.0
arahy.Tifrunner.gnm1.ann1.Y8U4CK Arachis hypogaea HOM05D004831 ORTHO05D003975 1.8e-106 391.3 777 38.9
Cfa002050 Carpinus fangiana HOM05D004831 ORTHO05D003975 1.1e-92 345.5 934 34.0
Phvul.002G299500 Phaseolus vulgaris HOM05D004831 ORTHO05D003975 1.9e-92 344.7 873 34.5
QL05p025363 Quercus lobata HOM05D004831 ORTHO05D003975 2.7e-86 324.3 873 33.6
Ciclev10024870m.g Citrus clementina HOM05D004831 ORTHO05D003975 2.2e-83 314.7 889 32.3
GSVIVG01017152001 Vitis vinifera HOM05D004831 ORTHO05D003975 1.4e-82 312.0 932 32.5
Potri.003G056600 Populus trichocarpa HOM05D004831 ORTHO05D003975 1.5e-81 308.5 860 33.6
CANSAT56G2043 Cannabis sativa HOM05D004831 ORTHO05D003975 9.4e-79 299.3 866 33.6
Prupe.3G073700 Prunus persica HOM05D004831 ORTHO05D003975 8.8e-77 292.7 839 31.2
Cpa.g.sc10.161 Carica papaya HOM05D004831 ORTHO05D003975 9.7e-76 289.3 863 31.4
Gorai.011G078100 Gossypium raimondii HOM05D004831 ORTHO05D003975 2.0e-73 281.6 853 32.0
Gohir.D10G072500 Gossypium hirsutum HOM05D004831 ORTHO05D003975 5.9e-73 280.0 860 32.1
MELO3C023366.2 Cucumis melo HOM05D004831 ORTHO05D003975 7.7e-73 279.6 870 33.3
CsaV3_7G033010 Cucumis sativus L. HOM05D004831 ORTHO05D003975 2.2e-72 278.1 875 33.3
Actinidia01793 Actinidia chinensis HOM05D004831 ORTHO05D003975 5.0e-72 276.9 870 30.8
Atru.chr1.3226 Acer truncatum HOM05D004831 ORTHO05D003975 4.2e-71 273.9 881 31.0
Dinv30528 Davidia involucrata HOM05D004831 ORTHO05D003975 5.5e-71 273.5 851 30.6
ClCG09G002300 Citrullus lanatus HOM05D004831 ORTHO05D003975 2.1e-70 271.6 869 32.1
Manes.11G052100 Manihot esculenta HOM05D004831 ORTHO05D003975 1.4e-69 268.9 873 30.9
Sabra03G0032100 Salix brachista HOM05D004831 ORTHO05D003975 1.4e-69 268.9 891 31.9
Gohir.A10G079000 Gossypium hirsutum HOM05D004831 ORTHO05D003975 5.7e-68 263.5 853 31.3
Sed0027172 Sechium edule HOM05D004831 ORTHO05D003975 3.7e-67 260.8 857 31.4
Potri.001G178200 Populus trichocarpa HOM05D004831 ORTHO05D003975 7.0e-66 256.5 823 30.3
TAR374G0326 Trochodendron aralioides HOM05D004831 ORTHO05D003975 5.0e-64 250.4 851 28.9
TAR626G1756 Trochodendron aralioides HOM05D004831 ORTHO05D003975 5.0e-64 250.4 851 28.9
Thecc.06G083000 Theobroma cacao HOM05D004831 ORTHO05D003975 1.9e-63 248.4 854 31.9
TPR.G24077 Trifolium pratense HOM05D004831 ORTHO05D003975 4.7e-62 243.8 171 79.5
TWI18G0228 Tripterygium wilfordii HOM05D004831 ORTHO05D003975 8.0e-62 243.0 850 30.5
Duzib235G0180 Durio zibethinus HOM05D004831 ORTHO05D003975 4.0e-61 240.7 814 31.6
PGSC0003DMG400002560 Solanum tuberosum HOM05D004831 ORTHO05D003975 4.0e-61 240.7 846 30.0
CSS0014524 Camellia sinensis var. sinensis HOM05D004831 ORTHO05D003975 2.0e-60 238.4 766 30.3
TAR383G0472 Trochodendron aralioides HOM05D004831 ORTHO05D003975 2.0e-60 238.4 852 28.9
TWI12G0693 Tripterygium wilfordii HOM05D004831 ORTHO05D003975 2.6e-60 238.0 864 30.1
RcHm_v2.0_Chr2g0137511 Rosa chinensis HOM05D004831 ORTHO05D003975 7.5e-60 236.5 860 30.3
Dinv38059 Davidia involucrata HOM05D004831 ORTHO05D003975 9.8e-60 236.1 848 30.0
PGR102G0340 Punica granatum HOM05D004831 ORTHO05D003975 1.3e-59 235.7 931 28.6
Rhsim08G0218700 Rhododendron simsii HOM05D004831 ORTHO05D003975 1.7e-59 235.3 856 30.6
CiPaw.02G152200 Carya illinoinensis HOM05D004831 ORTHO05D003975 3.1e-58 231.1 383 42.0
Eucgr.F03008 Eucalyptus grandis HOM05D004831 ORTHO05D003975 1.2e-57 229.2 850 30.9
Aa31sc115G30 Aethionema arabicum HOM05D004831 ORTHO05D003975 1.7e-56 225.3 881 29.7
Gorai.006G099900 Gossypium raimondii HOM05D004831 ORTHO05D003975 3.8e-56 224.2 772 32.0
Haze_16453 Corylus avellana HOM05D004831 ORTHO05D003975 6.5e-56 223.4 624 32.5
Gohir.A09G084100 Gossypium hirsutum HOM05D004831 ORTHO05D003975 1.1e-55 222.6 767 31.7
Sopen03g039230 Solanum pennellii HOM05D004831 ORTHO05D003975 2.5e-55 221.5 849 29.4
Actinidia15826 Actinidia chinensis HOM05D004831 ORTHO05D003975 3.2e-55 221.1 461 35.4
Solyc03g120340.3 Solanum lycopersicum HOM05D004831 ORTHO05D003975 2.8e-54 218.0 845 28.4
Gohir.D09G083900 Gossypium hirsutum HOM05D004831 ORTHO05D003975 3.6e-54 217.6 774 31.3
Aa31LG7G15290 Aethionema arabicum HOM05D004831 ORTHO05D003975 4.7e-54 217.2 860 29.3
Oeu021950.1 Olea europaea HOM05D004831 ORTHO05D003975 1.0e-53 216.1 868 28.1
Nn8g39278 Nelumbo nucifera HOM05D004831 ORTHO05D003975 6.8e-53 213.4 851 28.3
FAN14G0810 Fragaria x ananassa HOM05D004831 ORTHO05D003975 2.6e-52 211.5 861 28.5
Nitab4.5_0003885g0040 Nicotiana tabacum HOM05D004831 ORTHO05D003975 2.8e-51 208.0 872 28.2
Duzib160G0042 Durio zibethinus HOM05D004831 ORTHO05D003975 4.9e-51 207.2 772 30.8
CAN.G438.52 Capsicum annuum HOM05D004831 ORTHO05D003975 8.3e-51 206.5 845 28.6
vmacro18933 Vaccinium macrocarpon HOM05D004831 ORTHO05D003975 2.4e-50 204.9 831 28.4
FAN09G2060 Fragaria x ananassa HOM05D004831 ORTHO05D003975 3.1e-50 204.5 850 28.5
Peaxi162Scf00015g00247 Petunia axillaris HOM05D004831 ORTHO05D003975 1.2e-49 202.6 868 28.3
Hund06602 Selenicereus undatus HOM05D004831 ORTHO05D003975 1.0e-48 199.5 859 28.4
Hma1.2p1_2171F.1_g315970 Hydrangea macrophylla HOM05D004831 ORTHO05D003975 2.3e-48 198.4 845 27.9
Nitab4.5_0003159g0050 Nicotiana tabacum HOM05D004831 ORTHO05D003975 5.0e-48 197.2 865 28.3
Sc15g0001240 Simmondsia chinensis HOM05D004831 ORTHO05D003975 8.6e-48 196.4 893 27.9
Cc04_g03580 Coffea canephora HOM05D004831 ORTHO05D003975 3.3e-47 194.5 855 27.8
Lj5A62T33 Lonicera japonica HOM05D004831 ORTHO05D003975 2.1e-46 191.8 884 27.4
PSO782G5420 Papaver somniferum HOM05D004831 ORTHO05D003975 4.7e-46 190.7 927 26.2
PSO063G2677 Papaver somniferum HOM05D004831 ORTHO05D003975 4.0e-45 187.6 947 27.0
FvH4_6g30920 Fragaria vesca HOM05D004831 ORTHO05D003975 8.9e-45 186.4 854 27.4
THA.LOC104812471 Tarenaya hassleriana HOM05D004831 ORTHO05D003975 8.9e-45 186.4 866 27.5
MBI01_g10032_MAGBIO Magnolia biondii HOM05D004831 ORTHO05D003975 3.4e-44 184.5 861 27.2
SGA_v2.0_scaffold37G14809 Striga asiatica HOM05D004831 ORTHO05D003975 9.8e-44 183.0 872 30.2
Migut.I00846 Erythranthe guttata HOM05D004831 ORTHO05D003975 1.7e-43 182.2 449 31.8
AUR62011616 Chenopodium quinoa HOM05D004831 ORTHO05D003975 3.2e-42 177.9 870 26.3
MSTRG.22702 Avicennia marina HOM05D004831 ORTHO05D003975 4.1e-42 177.6 873 25.9
CARHR016160 Cardamine hirsuta HOM05D004831 ORTHO05D003975 9.2e-42 176.4 872 28.1
Oeu024063.2 Olea europaea HOM05D004831 ORTHO05D003975 1.2e-41 176.0 807 26.3
BcaC05g25641 Brassica carinata HOM05D004831 ORTHO05D003975 1.6e-41 175.6 857 27.1
FAN02G3038 Fragaria x ananassa HOM05D004831 ORTHO05D003975 5.9e-41 173.7 724 27.9
Sed0009949 Sechium edule HOM05D004831 ORTHO05D003975 1.3e-40 172.6 691 28.2
EL10Ac9g21986 Beta vulgaris HOM05D004831 ORTHO05D003975 1.7e-40 172.2 869 26.8
Ah.01g021180 Amaranthus hybridus HOM05D004831 ORTHO05D003975 8.6e-40 169.9 843 26.3
BolC5t30118H Brassica oleracea HOM05D004831 ORTHO05D003975 8.6e-40 169.9 860 27.1
HanXRQChr02g0032681 Helianthus annuus HOM05D004831 ORTHO05D003975 1.5e-39 169.1 853 26.0
COL.COLO4_30332 Corchorus olitorius HOM05D004831 ORTHO05D003975 1.9e-39 168.7 364 35.2
Hma1.2p1_0323F.1_g125270 Hydrangea macrophylla HOM05D004831 ORTHO05D003975 7.3e-39 166.8 808 26.7
A06p11680 Brassica napus HOM05D004831 ORTHO05D003975 9.5e-39 166.4 860 27.8
BraA06t24347Z Brassica rapa HOM05D004831 ORTHO05D003975 1.6e-38 165.6 857 27.5
CDE04G1285 Ceratophyllum demersum HOM05D004831 ORTHO05D003975 1.6e-38 165.6 835 26.5
MD17G1197700 Malus domestica HOM05D004831 ORTHO05D003975 1.6e-38 165.6 764 26.8
Lsat_1_v5_gn_1_34820 Lactuca sativa HOM05D004831 ORTHO05D003975 3.6e-38 164.5 850 25.6
Hma1.2p1_0682F.1_g202670 Hydrangea macrophylla HOM05D004831 ORTHO05D003975 6.2e-38 163.7 770 27.9
HanXRQChr05g0163461 Helianthus annuus HOM05D004831 ORTHO05D003975 1.4e-37 162.5 848 26.2
C05p13810 Brassica napus HOM05D004831 ORTHO05D012057 1.8e-37 162.2 810 27.0
AUR62016432 Chenopodium quinoa HOM05D004831 ORTHO05D003975 5.2e-37 160.6 873 26.8
Manes.04G121450 Manihot esculenta HOM05D004831 ORTHO05D003975 6.8e-37 160.2 529 30.8
AT1G15660 Arabidopsis thaliana HOM05D004831 ORTHO05D003975 2.0e-36 158.7 860 26.9
Sp1g13970 Schrenkiella parvula HOM05D004831 ORTHO05D003975 3.2e-34 151.4 850 25.8
BcaC05g25510 Brassica carinata HOM05D004831 ORTHO05D003975 9.2e-34 149.8 868 27.2
Thhalv10006918m.g Eutrema salsugineum HOM05D004831 ORTHO05D003975 1.7e-32 145.6 865 26.4
AL1G27760 Arabidopsis lyrata HOM05D004831 ORTHO05D003975 2.5e-31 141.7 865 25.3
Carub.0001s1544 Capsella rubella HOM05D004831 ORTHO05D003975 3.1e-29 134.8 866 25.9
DCAR_009558 Daucus carota HOM05D004831 ORTHO05D003975 1.5e-28 132.5 397 33.5
Aqoxy7G01849 Aquilegia oxysepala HOM05D004831 ORTHO05D003975 2.0e-28 132.1 822 26.9
Haze_24989 Corylus avellana HOM05D004831 ORTHO05D003975 1.3e-27 129.4 389 30.1
Aa31LG7G300 Aethionema arabicum HOM05D004831 ORTHO05D003975 2.9e-27 128.3 656 27.3
ATR0037G028 Amborella trichopoda HOM05D004831 ORTHO05D003975 2.9e-27 128.3 859 25.3
unitig_62.g23772 Utricularia gibba HOM05D004831 ORTHO05D003975 4.9e-27 127.5 890 24.4
HPP92_017895 Vanilla planifolia HOM05D004831 ORTHO05D003975 7.1e-26 123.6 873 23.1
Actinidia15827 Actinidia chinensis HOM05D004831 ORTHO05D003975 6.0e-25 120.6 306 37.6
ClCG05G013830 Citrullus lanatus HOM05D004831 ORTHO05D003975 1.7e-24 119.0 343 34.1
DCAR_026304 Daucus carota HOM05D004831 ORTHO05D003975 2.1e-22 112.1 378 29.6
Lsat_1_v5_gn_9_45780 Lactuca sativa HOM05D004831 ORTHO05D003975 2.4e-21 108.6 792 24.0
TAR624G1194 Trochodendron aralioides HOM05D004831 ORTHO05D003975 1.7e-19 102.4 146 41.8
Zm00001eb358290 Zea mays HOM05D018572 ORTHO05D003975 1.4e-18 99.4 95 50.5
Zm00001eb159780 Zea mays HOM05D018572 ORTHO05D003975 2.7e-17 95.1 95 47.4
Duzib192G1036 Durio zibethinus HOM05D004831 ORTHO05D003975 3.5e-17 94.7 333 31.2
COL.COLO4_30333 Corchorus olitorius HOM05D004831 ORTHO05D003975 4.6e-17 94.4 128 43.8
Pp3c2_32580 Physcomitrium patens HOM05D004831 ORTHO05D003975 6.0e-17 94.0 136 41.2
SHI09312 Sapria himalayana HOM05D004831 ORTHO05D003975 7.8e-17 93.6 535 25.0
Os01g0617700 Oryza sativa ssp. japonica HOM05D004831 ORTHO05D003975 1.7e-16 92.4 798 22.4
AagrBONN_evm.TU.Sc2ySwM_368.483__484 Anthoceros agrestis HOM05D004831 ORTHO05D003975 5.1e-16 90.9 86 52.3
BcaB03g14531 Brassica carinata HOM05D004831 ORTHO05D017393 6.6e-16 90.5 207 31.4
SHI09311 Sapria himalayana HOM05D004831 ORTHO05D003975 8.7e-16 90.1 127 46.5
Migut.I00847 Erythranthe guttata HOM05D004831 ORTHO05D003975 3.3e-15 88.2 123 41.5
ECA247G1173 Erigeron canadensis HOM05D004831 ORTHO05D003975 2.1e-14 85.5 114 44.7
SMO203G0255 Selaginella moellendorffii HOM05D004831 ORTHO05D003975 1.4e-13 82.8 82 46.3
Mapoly0008s0161 Marchantia polymorpha HOM05D004831 ORTHO05D003975 1.1e-10 73.2 74 47.3
Pp3c5_11060 Physcomitrium patens HOM05D004831 ORTHO05D003975 1.9e-10 72.4 87 37.9
TPR.G8483 Trifolium pratense HOM05D004831 ORTHO05D048837 2.4e-10 72.0 153 41.8
MD09G1215000 Malus domestica HOM05D004831 ORTHO05D003975 3.3e-07 61.6 149 32.9
MCO08G035 Micromonas commoda HOM05D004831 ORTHO05D003975 1.6e-06 59.3 66 53.0
SEGI_34595 Sequoiadendron giganteum HOM05D004831 ORTHO05D003975 3.6e-06 58.2 195 27.2


User provided reference genes

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