Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G31317 Trifolium pratense HOM05D007523 ORTHO05D009520 1.8e-80 302.8 176 100.0
Medtr8g071180 Medicago truncatula HOM05D007523 ORTHO05D009520 2.3e-72 275.8 176 93.2
Psat4g110520 Pisum sativum HOM05D007523 ORTHO05D009520 6.1e-65 251.1 176 86.9
Ca_22486_v3 Cicer arietinum L. HOM05D007523 ORTHO05D009520 1.2e-63 246.9 173 86.1
Lj4g0001215 Lotus japonicus HOM05D007523 ORTHO05D009520 5.7e-55 218.0 176 73.9
Lalb_Chr16g0392051 Lupinus albus HOM05D007523 ORTHO05D009520 7.0e-45 184.5 176 63.6
Phvul.003G279400 Phaseolus vulgaris HOM05D007523 ORTHO05D009520 4.4e-39 165.2 175 61.1
Manes.17G008000 Manihot esculenta HOM05D007523 ORTHO05D009520 6.4e-38 161.4 173 58.4
arahy.Tifrunner.gnm1.ann1.7DC73F Arachis hypogaea HOM05D007523 ORTHO05D009520 2.4e-37 159.5 167 60.5
arahy.Tifrunner.gnm1.ann1.19GUIE Arachis hypogaea HOM05D007523 ORTHO05D009520 3.2e-37 159.1 167 60.5
Glyma.16G104300 Glycine max HOM05D007523 ORTHO05D009520 4.1e-37 158.7 176 59.7
Haze_08076 Corylus avellana HOM05D007523 ORTHO05D009520 6.0e-36 154.8 174 58.6
VMungo0251G0133 Vigna mungo HOM05D007523 ORTHO05D009520 3.9e-35 152.1 172 57.6
QL12p000900 Quercus lobata HOM05D007523 ORTHO05D009520 1.9e-34 149.8 173 55.5
Potri.001G132400 Populus trichocarpa HOM05D007523 ORTHO05D009520 1.2e-33 147.1 175 54.3
Sabra01G0102200 Salix brachista HOM05D007523 ORTHO05D009520 1.8e-32 143.3 173 54.3
TAR629G3055 Trochodendron aralioides HOM05D007523 ORTHO05D009520 8.9e-32 141.0 173 52.6
CiPaw.11G102500 Carya illinoinensis HOM05D007523 ORTHO05D009520 4.4e-31 138.7 173 55.5
Dinv28021 Davidia involucrata HOM05D007523 ORTHO05D009520 1.3e-30 137.1 155 59.4
CSS0001694 Camellia sinensis var. sinensis HOM05D007523 ORTHO05D009520 3.8e-30 135.6 173 54.9
Prupe.5G021500 Prunus persica HOM05D007523 ORTHO05D009520 4.9e-30 135.2 176 51.7
CSS0003197 Camellia sinensis var. sinensis HOM05D007523 ORTHO05D009520 2.4e-29 132.9 173 53.8
MD06G1014600 Malus domestica HOM05D007523 ORTHO05D009520 2.4e-29 132.9 179 50.3
Thhalv10026426m.g Eutrema salsugineum HOM05D007523 ORTHO05D009520 2.1e-28 129.8 173 55.5
vmacro00070 Vaccinium macrocarpon HOM05D007523 ORTHO05D009520 7.8e-28 127.9 173 48.6
CANSAT21G1314 Cannabis sativa HOM05D007523 ORTHO05D009520 3.9e-27 125.6 173 51.4
Ciclev10002679m.g Citrus clementina HOM05D007523 ORTHO05D009520 3.9e-27 125.6 176 52.8
Thecc.02G365300 Theobroma cacao HOM05D007523 ORTHO05D009520 3.9e-27 125.6 173 53.2
Atru.chr6.1496 Acer truncatum HOM05D007523 ORTHO05D009520 5.1e-27 125.2 173 52.6
GSVIVG01026296001 Vitis vinifera HOM05D007523 ORTHO05D009520 5.1e-27 125.2 173 52.0
FAN04G1224 Fragaria x ananassa HOM05D007523 ORTHO05D009520 8.7e-27 124.4 172 50.6
Eucgr.D02602 Eucalyptus grandis HOM05D007523 ORTHO05D009520 1.9e-26 123.2 174 52.3
Duzib248G0934 Durio zibethinus HOM05D007523 ORTHO05D009520 3.3e-26 122.5 173 52.0
RcHm_v2.0_Chr7g0213271 Rosa chinensis HOM05D007523 ORTHO05D009520 4.3e-26 122.1 177 48.6
FvH4_5g23880 Fragaria vesca HOM05D007523 ORTHO05D009520 7.3e-26 121.3 175 49.1
FAN18G0623 Fragaria x ananassa HOM05D007523 ORTHO05D009520 7.3e-26 121.3 175 49.1
FAN18G3486 Fragaria x ananassa HOM05D007523 ORTHO05D009520 7.3e-26 121.3 175 49.1
Cc08_g04400 Coffea canephora HOM05D007523 ORTHO05D009520 1.2e-25 120.6 173 46.2
Nn1g02124 Nelumbo nucifera HOM05D007523 ORTHO05D009520 1.6e-25 120.2 173 50.3
BcaNung03083 Brassica carinata HOM05D007523 ORTHO05D009520 8.1e-25 117.9 173 53.8
AL7G35030 Arabidopsis lyrata HOM05D007523 ORTHO05D009520 1.1e-24 117.5 173 51.4
Aa31LG6G1770 Aethionema arabicum HOM05D007523 ORTHO05D005023 1.4e-24 117.1 151 56.3
BolC7t45523H Brassica oleracea HOM05D007523 ORTHO05D009520 1.4e-24 117.1 173 53.8
BraA03t14258Z Brassica rapa HOM05D000452 ORTHO05D000647 1.8e-24 116.7 159 56.0
Oeu017333.1 Olea europaea HOM05D007523 ORTHO05D009520 1.8e-24 116.7 133 60.2
A03p51710 Brassica napus HOM05D000137 ORTHO05D002305 2.4e-24 116.3 159 56.0
CARHR225970 Cardamine hirsuta HOM05D007523 ORTHO05D009520 2.4e-24 116.3 175 50.9
ATR1098G100 Amborella trichopoda HOM05D007523 ORTHO05D009520 3.1e-24 115.9 173 51.4
Carub.0007s2207 Capsella rubella HOM05D007523 ORTHO05D009520 5.2e-24 115.2 175 52.0
SGA_v2.0_scaffold96G29060 Striga asiatica HOM05D007523 ORTHO05D009520 6.9e-24 114.8 150 54.7
Sp7g17790 Schrenkiella parvula HOM05D007523 ORTHO05D005023 9.0e-24 114.4 151 57.0
BcaC06g30615 Brassica carinata HOM05D007523 ORTHO05D009520 1.2e-23 114.0 158 56.3
C07p50210 Brassica napus HOM05D000137 ORTHO05D002305 1.2e-23 114.0 158 55.7
PGR031G0795 Punica granatum HOM05D007523 ORTHO05D009520 2.0e-23 113.2 173 50.9
TWI34G1559 Tripterygium wilfordii HOM05D007523 ORTHO05D009520 3.4e-23 112.5 172 48.8
AT4G19070 Arabidopsis thaliana HOM05D007523 ORTHO05D009520 4.4e-23 112.1 175 49.7
Aqoxy4G00046 Aquilegia oxysepala HOM05D007523 ORTHO05D009520 5.8e-23 111.7 174 50.0
Nn3g19239 Nelumbo nucifera HOM05D007523 ORTHO05D009520 7.6e-23 111.3 173 49.1
Sc22g0001970 Simmondsia chinensis HOM05D007523 ORTHO05D009520 7.6e-23 111.3 173 49.1
ClCG07G002350 Citrullus lanatus HOM05D007523 ORTHO05D009520 1.3e-22 110.5 173 50.3
Peaxi162Scf00876g00434 Petunia axillaris HOM05D007523 ORTHO05D009520 4.9e-22 108.6 173 47.4
PSO675G0851 Papaver somniferum HOM05D007523 ORTHO05D009520 6.4e-22 108.2 173 48.0
THA.LOC104811020 Tarenaya hassleriana HOM05D007523 ORTHO05D009520 6.4e-22 108.2 160 53.1
MSTRG.1775 Avicennia marina HOM05D007523 ORTHO05D009520 3.2e-21 105.9 173 49.1
Rhsim11G0026000 Rhododendron simsii HOM05D007523 ORTHO05D009520 3.2e-21 105.9 147 49.7
CsaV3_3G030330 Cucumis sativus L. HOM05D007523 ORTHO05D009520 4.2e-21 105.5 180 47.8
Gorai.008G189000 Gossypium raimondii HOM05D007523 ORTHO05D009520 4.2e-21 105.5 173 49.7
Gohir.A12G173966 Gossypium hirsutum HOM05D007523 ORTHO05D009520 5.4e-21 105.1 173 49.7
Migut.E01344 Erythranthe guttata HOM05D007523 ORTHO05D009520 7.1e-21 104.8 168 48.2
ECA240G1522 Erigeron canadensis HOM05D007523 ORTHO05D009520 9.3e-21 104.4 123 61.8
HanXRQChr03g0082201 Helianthus annuus HOM05D007523 ORTHO05D009520 2.1e-20 103.2 97 70.1
Migut.A00547 Erythranthe guttata HOM05D007523 ORTHO05D009520 3.5e-20 102.4 125 53.6
Gohir.D12G176600 Gossypium hirsutum HOM05D007523 ORTHO05D009520 4.6e-20 102.1 173 48.6
PSO675G0835 Papaver somniferum HOM05D007523 ORTHO05D009520 6.0e-20 101.7 137 56.9
Cpa.g.sc355.1 Carica papaya HOM05D007523 ORTHO05D009520 1.0e-19 100.9 110 68.2
Ah.12g055890 Amaranthus hybridus HOM05D002287 ORTHO05D002588 1.7e-19 100.1 152 50.7
CDE05G0732 Ceratophyllum demersum HOM05D007523 ORTHO05D009520 1.7e-19 100.1 175 47.4
SalBow8G2402 Salvia bowleyana HOM05D007523 ORTHO05D009520 1.7e-19 100.1 151 53.0
Actinidia04633 Actinidia chinensis HOM05D007523 ORTHO05D009520 3.0e-19 99.4 173 42.8
Sed0002333 Sechium edule HOM05D007523 ORTHO05D009520 1.5e-18 97.1 174 45.4
MBI18_g28211_MAGBIO Magnolia biondii HOM05D007523 ORTHO05D009520 2.5e-18 96.3 173 47.4
EL10Ac5g11951 Beta vulgaris HOM05D007523 ORTHO05D009520 5.6e-18 95.1 88 75.0
AUR62027336 Chenopodium quinoa HOM05D007523 ORTHO05D009520 1.3e-17 94.0 150 52.0
Solyc12g096090.2 Solanum lycopersicum HOM05D007523 ORTHO05D009520 1.3e-17 94.0 175 45.7
Nitab4.5_0000943g0130 Nicotiana tabacum HOM05D007523 ORTHO05D009520 2.1e-17 93.2 133 54.1
Nitab4.5_0006741g0030 Nicotiana tabacum HOM05D007523 ORTHO05D009520 2.8e-17 92.8 133 54.1
PGSC0003DMG400029292 Solanum tuberosum HOM05D007523 ORTHO05D009520 3.6e-17 92.4 133 52.6
Sopen12g031980 Solanum pennellii HOM05D007523 ORTHO05D009520 8.1e-17 91.3 133 52.6
AUR62007395 Chenopodium quinoa HOM05D002287 ORTHO05D009520 1.8e-16 90.1 165 48.5
SalBow4G0950 Salvia bowleyana HOM05D007523 ORTHO05D009520 3.1e-16 89.4 78 78.2
CAN.G947.41 Capsicum annuum HOM05D007523 ORTHO05D009520 6.9e-16 88.2 133 51.1
Peaxi162Scf00972g00043 Petunia axillaris HOM05D007523 ORTHO05D009520 6.4e-14 81.6 92 63.0
Mapoly0024s0063 Marchantia polymorpha HOM05D007523 ORTHO05D009520 2.4e-13 79.7 92 63.0
unitig_0.g2217 Utricularia gibba HOM05D007523 ORTHO05D009520 3.2e-13 79.3 109 59.6
Os07g0143600 Oryza sativa ssp. japonica HOM05D007523 ORTHO05D009520 4.2e-13 79.0 172 40.7
HPP92_012195 Vanilla planifolia HOM05D007523 ORTHO05D009520 4.2e-13 79.0 88 67.0
Mapoly0010s0014 Marchantia polymorpha HOM05D007523 ORTHO05D009520 7.1e-13 78.2 96 61.5
COL.COLO4_11248 Corchorus olitorius HOM05D007523 ORTHO05D009520 6.0e-12 75.1 132 40.9
AagrBONN_evm.TU.Sc2ySwM_368.2556 Anthoceros agrestis HOM05D007523 ORTHO05D009520 7.9e-12 74.7 87 57.5
Pp3c19_7810 Physcomitrium patens HOM05D007523 ORTHO05D009520 8.7e-11 71.2 94 54.3
MSTRG.11889 Avicennia marina HOM05D007523 ORTHO05D009520 4.8e-09 65.5 80 63.8
SMO353G0121 Selaginella moellendorffii HOM05D007523 ORTHO05D009520 1.1e-08 64.3 101 55.4
SMO364G0280 Selaginella moellendorffii HOM05D007523 ORTHO05D009520 1.8e-08 63.5 83 60.2


User provided reference genes

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