Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G31184 Trifolium pratense HOM05D007327 ORTHO05D009342 5.5e-206 720.7 353 100.0
Psat1g101680 Pisum sativum HOM05D007327 ORTHO05D009342 9.7e-187 656.8 353 88.1
Medtr6g036750 Medicago truncatula HOM05D007327 ORTHO05D009342 3.6e-181 638.3 353 86.4
Glyma.02G081500 Glycine max HOM05D007327 ORTHO05D009342 1.5e-163 579.7 351 76.9
arahy.Tifrunner.gnm1.ann1.LUB646 Arachis hypogaea HOM05D007327 ORTHO05D009342 1.4e-161 573.2 352 77.8
arahy.Tifrunner.gnm1.ann1.S2I56E Arachis hypogaea HOM05D007327 ORTHO05D009342 1.8e-161 572.8 352 77.6
Lj2g0012645 Lotus japonicus HOM05D007327 ORTHO05D009342 4.1e-161 571.6 352 77.8
Lalb_Chr19g0130241 Lupinus albus HOM05D007327 ORTHO05D009342 3.4e-155 552.0 353 75.6
Phvul.004G094900 Phaseolus vulgaris HOM05D007327 ORTHO05D009342 3.4e-155 552.0 351 74.9
Cfa018321 Carpinus fangiana HOM05D007327 ORTHO05D009342 1.3e-154 550.1 352 71.0
Prupe.8G031100 Prunus persica HOM05D007327 ORTHO05D009342 1.5e-150 536.6 352 71.0
Manes.18G092400 Manihot esculenta HOM05D007327 ORTHO05D009342 1.2e-149 533.5 353 70.0
Dinv25868 Davidia involucrata HOM05D007327 ORTHO05D009342 4.0e-148 528.5 360 68.9
CANSAT25G1895 Cannabis sativa HOM05D007327 ORTHO05D009342 5.2e-148 528.1 352 69.3
Atru.chr13.2102 Acer truncatum HOM05D007327 ORTHO05D009342 2.6e-147 525.8 352 69.6
COL.COLO4_08563 Corchorus olitorius HOM05D007327 ORTHO05D009342 3.2e-145 518.8 351 69.2
Potri.002G067900 Populus trichocarpa HOM05D007327 ORTHO05D009342 3.2e-145 518.8 351 68.9
TWI60G1090 Tripterygium wilfordii HOM05D007327 ORTHO05D009342 4.1e-145 518.5 351 66.7
Hma1.2p1_0105F.1_g050650 Hydrangea macrophylla HOM05D007327 ORTHO05D009342 2.7e-144 515.8 351 69.2
CSS0015629 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 3.5e-144 515.4 351 68.4
Thecc.08G153100 Theobroma cacao HOM05D007327 ORTHO05D009342 3.5e-144 515.4 351 69.2
Eucgr.F04237 Eucalyptus grandis HOM05D007327 ORTHO05D009342 6.0e-144 514.6 354 66.9
GSVIVG01034535001 Vitis vinifera HOM05D007327 ORTHO05D009342 3.0e-143 512.3 351 68.9
Ciclev10001558m.g Citrus clementina HOM05D007327 ORTHO05D009342 1.5e-142 510.0 354 68.6
Actinidia17791 Actinidia chinensis HOM05D007327 ORTHO05D009342 2.5e-142 509.2 351 66.4
Gorai.002G114900 Gossypium raimondii HOM05D007327 ORTHO05D009342 5.6e-142 508.1 351 67.0
MD05G1026600 Malus domestica HOM05D007327 ORTHO05D009342 1.2e-141 506.9 352 68.5
TAR628G0726 Trochodendron aralioides HOM05D007327 ORTHO05D009342 2.1e-141 506.1 355 65.9
Gohir.D01G089200 Gossypium hirsutum HOM05D007327 ORTHO05D009342 2.8e-141 505.8 351 66.7
FvH4_2g13700 Fragaria vesca HOM05D007327 ORTHO05D009342 3.6e-141 505.4 352 65.3
RcHm_v2.0_Chr6g0275381 Rosa chinensis HOM05D007327 ORTHO05D009342 3.6e-141 505.4 352 66.5
Gohir.A01G103900 Gossypium hirsutum HOM05D007327 ORTHO05D009342 8.1e-141 504.2 351 66.7
Sed0007638 Sechium edule HOM05D007327 ORTHO05D009342 6.8e-140 501.1 351 64.7
Peaxi162Scf00599g00511 Petunia axillaris HOM05D007327 ORTHO05D009342 1.2e-139 500.4 350 66.0
CiPaw.15G016000 Carya illinoinensis HOM05D007327 ORTHO05D009342 2.0e-139 499.6 330 68.8
Oeu051268.1 Olea europaea HOM05D007327 ORTHO05D009342 9.8e-139 497.3 384 60.7
CsaV3_6G005130 Cucumis sativus L. HOM05D007327 ORTHO05D009342 1.3e-138 496.9 351 65.0
QL02p039069 Quercus lobata HOM05D007327 ORTHO05D009342 1.7e-138 496.5 451 54.8
MELO3C029831.2 Cucumis melo HOM05D007327 ORTHO05D009342 4.9e-138 495.0 351 65.0
Nn5g28751 Nelumbo nucifera HOM05D007327 ORTHO05D009342 9.2e-137 490.7 351 62.7
ECA247G1449 Erigeron canadensis HOM05D007327 ORTHO05D009342 3.0e-135 485.7 352 61.9
Solyc04g071470.3 Solanum lycopersicum HOM05D007327 ORTHO05D009342 6.6e-135 484.6 351 63.8
Lsat_1_v5_gn_1_6021 Lactuca sativa HOM05D007327 ORTHO05D009342 1.5e-134 483.4 350 62.6
PSO541G6301 Papaver somniferum HOM05D007327 ORTHO05D009342 1.5e-134 483.4 354 61.3
SGA_v2.0_scaffold24G10336 Striga asiatica HOM05D007327 ORTHO05D009342 1.9e-134 483.0 352 64.2
HanXRQChr04g0108941 Helianthus annuus HOM05D007327 ORTHO05D009342 5.6e-134 481.5 353 60.9
Sopen04g027430 Solanum pennellii HOM05D007327 ORTHO05D009342 5.6e-134 481.5 351 63.2
FAN24G0347 Fragaria x ananassa HOM05D007327 ORTHO05D009342 4.7e-133 478.4 416 55.5
FAN15G0044 Fragaria x ananassa HOM05D007327 ORTHO05D009342 1.8e-132 476.5 416 55.5
ATR0582G033 Amborella trichopoda HOM05D007327 ORTHO05D009342 2.7e-128 462.6 352 60.2
Os01g0867200 Oryza sativa ssp. japonica HOM05D007327 ORTHO05D009342 5.1e-127 458.4 353 60.3
HPP92_000065 Vanilla planifolia HOM05D007327 ORTHO05D009342 7.3e-126 454.5 352 58.8
Duzib093G0512 Durio zibethinus HOM05D007327 ORTHO05D009342 2.8e-125 452.6 351 64.4
Nitab4.5_0002452g0030 Nicotiana tabacum HOM05D007327 ORTHO05D009342 2.8e-125 452.6 364 59.1
Zm00001eb146700 Zea mays HOM05D007327 ORTHO05D009342 8.1e-125 451.1 352 59.4
PSO675G1203 Papaver somniferum HOM05D007327 ORTHO05D009342 4.2e-121 438.7 356 57.6
PGR044G2476 Punica granatum HOM05D007327 ORTHO05D009342 1.2e-120 437.2 353 61.2
PGR100G0004 Punica granatum HOM05D007327 ORTHO05D009342 1.2e-120 437.2 353 61.2
PGR080G0004 Punica granatum HOM05D007327 ORTHO05D009342 3.5e-120 435.6 353 60.9
Haze_17755 Corylus avellana HOM05D007327 ORTHO05D009342 7.8e-120 434.5 499 46.9
Aqoxy6G00379 Aquilegia oxysepala HOM05D007327 ORTHO05D009342 1.3e-119 433.7 312 62.8
Hund26695 Selenicereus undatus HOM05D007327 ORTHO05D009342 9.9e-115 417.5 354 57.9
ClCG08G007070 Citrullus lanatus HOM05D007327 ORTHO05D009342 5.1e-111 405.2 456 47.4
Ca_25918_v3 Cicer arietinum L. HOM05D007327 ORTHO05D009342 1.7e-98 363.6 197 85.3
Cc10_g14850 Coffea canephora HOM05D007327 ORTHO05D009342 2.9e-98 362.8 286 58.7
Glyma.16G166900 Glycine max HOM05D007327 ORTHO05D009342 1.2e-96 357.5 191 83.8
Sabra02G0053500 Salix brachista HOM05D007327 ORTHO05D009342 2.5e-86 323.2 228 64.5
VMungo0464G2010 Vigna mungo HOM05D007327 ORTHO05D009342 9.7e-86 321.2 215 73.5
unitig_26.g9897 Utricularia gibba HOM05D007327 ORTHO05D009342 1.3e-85 320.9 291 54.6
Pp3c20_20940 Physcomitrium patens HOM05D007327 ORTHO05D009342 4.8e-85 318.9 357 43.4
SMO335G0004 Selaginella moellendorffii HOM05D007327 ORTHO05D009342 2.5e-81 306.6 358 44.1
SalBow7G2928 Salvia bowleyana HOM05D007327 ORTHO05D009342 1.8e-76 290.4 343 47.8
DCAR_010093 Daucus carota HOM05D007327 ORTHO05D009342 9.1e-68 261.5 170 70.0
Migut.C00996 Erythranthe guttata HOM05D007327 ORTHO05D009342 2.5e-65 253.4 147 75.5
AagrBONN_evm.TU.Sc2ySwM_344.2825 Anthoceros agrestis HOM05D007327 ORTHO05D009342 1.3e-61 241.1 235 47.2
SHI09061 Sapria himalayana HOM05D007327 ORTHO05D009342 2.5e-57 226.9 249 49.0
SMO228G0199 Selaginella moellendorffii HOM05D007327 ORTHO05D009342 3.1e-52 209.9 358 34.9
Cc00_g31580 Coffea canephora HOM05D007327 ORTHO05D009342 1.9e-49 200.7 140 62.1
MCO03G524 Micromonas commoda HOM05D007327 ORTHO05D009342 3.1e-44 183.3 422 30.1
Cpa.g.sc21.198 Carica papaya HOM05D007327 ORTHO05D009342 1.6e-43 181.0 160 60.6
Glyma.16G166950 Glycine max HOM05D007327 ORTHO05D009342 2.3e-42 177.2 128 67.2
PRCOL_00001255 Prasinoderma coloniale HOM05D007327 ORTHO05D009342 3.7e-37 159.8 376 32.2
Cpa.g.c33136.2 Carica papaya HOM05D007327 ORTHO05D009342 9.2e-36 155.2 108 64.8
MBI17_g33117_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 2.4e-28 130.6 71 77.5
Cc07_g11820 Coffea canephora HOM05D007327 ORTHO05D009342 2.0e-27 127.5 70 72.9
Cc10_g14400 Coffea canephora HOM05D007327 ORTHO05D009342 2.0e-27 127.5 70 72.9
CDE02G1931 Ceratophyllum demersum HOM05D007327 ORTHO05D009342 4.6e-27 126.3 70 78.6
SEGI_20996 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 7.8e-27 125.6 101 53.5
SEGI_01400 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 7.3e-25 119.0 104 51.0
SalBow7G1135 Salvia bowleyana HOM05D007327 ORTHO05D009342 1.6e-24 117.9 103 57.3
MBI17_g25900_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 4.7e-24 116.3 102 55.9
Cre12.g548350 Chlamydomonas reinhardtii HOM05D007327 ORTHO05D009342 1.7e-21 107.8 288 26.7
MBI17_g33124_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 2.9e-21 107.1 113 50.4
CSS0009897 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 8.3e-21 105.5 68 72.1
CSS0013095 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 1.1e-20 105.1 68 70.6
CSS0040121 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 4.1e-20 103.2 68 69.1
CSS0048751 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 1.2e-19 101.7 68 69.1
PSO541G3507 Papaver somniferum HOM05D000022 ORTHO05D000071 3.9e-18 96.7 58 63.8
CSS0014849 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 2.1e-16 90.9 89 52.8
MBI09_g12042_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 3.6e-16 90.1 50 72.0
HPP92_000064 Vanilla planifolia HOM05D007327 ORTHO05D009342 6.2e-16 89.4 81 54.3
SEGI_01531 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 2.2e-13 80.9 50 68.0
Actinidia27255 Actinidia chinensis HOM05D007327 ORTHO05D009342 2.9e-13 80.5 158 37.3
arahy.Tifrunner.gnm1.ann1.DQ97IN Arachis hypogaea HOM05D007327 ORTHO05D009342 7.8e-11 72.4 90 52.2
MBI17_g33120_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 1.3e-10 71.6 83 41.0
arahy.Tifrunner.gnm1.ann1.KIIE1S Arachis hypogaea HOM05D000198 ORTHO05D003365 2.5e-09 67.4 61 50.8
arahy.Tifrunner.gnm1.ann1.B7BSQF Arachis hypogaea HOM05D000002 ORTHO05D000047 5.6e-09 66.2 134 38.1


User provided reference genes

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