Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G31006 Trifolium pratense HOM05D007960 ORTHO05D010026 5.3e-66 254.2 128 100.0
Psat1g027680 Pisum sativum HOM05D007960 ORTHO05D010026 4.6e-46 188.0 128 78.9
Medtr2g056070 Medicago truncatula HOM05D007960 ORTHO05D010026 2.5e-44 182.2 128 77.3
Lj1g0016835 Lotus japonicus HOM05D007960 ORTHO05D010026 2.2e-35 152.5 98 77.6
Glyma.17G123900 Glycine max HOM05D007960 ORTHO05D010026 1.8e-34 149.4 125 63.2
Phvul.003G179700 Phaseolus vulgaris HOM05D007960 ORTHO05D010026 3.2e-31 138.7 125 56.8
Ca_02635_v3 Cicer arietinum L. HOM05D007960 ORTHO05D010026 1.2e-30 136.7 81 81.5
Ca_30215_v3 Cicer arietinum L. HOM05D007960 ORTHO05D010026 1.2e-30 136.7 81 81.5
VMungo1215G0525 Vigna mungo HOM05D007960 ORTHO05D010026 4.7e-30 134.8 115 60.9
QL10p022177 Quercus lobata HOM05D007960 ORTHO05D010026 5.5e-23 111.3 118 52.5
Lalb_Chr13g0302531 Lupinus albus HOM05D007960 ORTHO05D010026 9.4e-23 110.5 96 63.5
Glyma.05G015600 Glycine max HOM05D007960 ORTHO05D010026 4.4e-20 101.7 108 55.6
Ciclev10024471m.g Citrus clementina HOM05D007960 ORTHO05D010026 1.4e-18 96.7 126 48.4
CiPaw.15G122900 Carya illinoinensis HOM05D007960 ORTHO05D010026 1.6e-17 93.2 124 47.6
Haze_18568 Corylus avellana HOM05D007960 ORTHO05D010026 7.7e-17 90.9 107 49.5
Haze_18570 Corylus avellana HOM05D007960 ORTHO05D010026 5.0e-16 88.2 110 47.3
MD14G1219300 Malus domestica HOM05D007960 ORTHO05D010026 5.0e-16 88.2 123 48.0
Hma1.2p1_0340F.1_g130110 Hydrangea macrophylla HOM05D007960 ORTHO05D010026 8.5e-16 87.4 123 45.5
Nn3g17652 Nelumbo nucifera HOM05D007960 ORTHO05D010026 1.9e-15 86.3 112 48.2
Cc04_g07760 Coffea canephora HOM05D007960 ORTHO05D010026 2.1e-14 82.8 115 42.6
Atru.chr9.701 Acer truncatum HOM05D007960 ORTHO05D010026 8.0e-14 80.9 103 50.5
Nitab4.5_0004342g0110 Nicotiana tabacum HOM05D007960 ORTHO05D010026 2.3e-13 79.3 66 63.6
Carub.0002s2086 Capsella rubella HOM05D007960 ORTHO05D010026 3.0e-13 79.0 110 44.5
AL2G33950 Arabidopsis lyrata HOM05D007960 ORTHO05D010026 4.0e-13 78.6 134 39.6
BcaC08g46805 Brassica carinata HOM05D007960 ORTHO05D010026 4.0e-13 78.6 136 39.7
BolC6t39852H Brassica oleracea HOM05D007960 ORTHO05D010026 4.0e-13 78.6 136 39.7
CARHR067210 Cardamine hirsuta HOM05D007960 ORTHO05D010026 4.0e-13 78.6 126 42.1
C06p48150 Brassica napus HOM05D007960 ORTHO05D010026 5.2e-13 78.2 136 40.4
Manes.01G022400 Manihot esculenta HOM05D007960 ORTHO05D010026 5.2e-13 78.2 132 43.9
A07p39920 Brassica napus HOM05D007960 ORTHO05D010026 6.8e-13 77.8 140 40.0
BraA07t31538Z Brassica rapa HOM05D007960 ORTHO05D010026 6.8e-13 77.8 140 40.0
BcaC08g46834 Brassica carinata HOM05D007960 ORTHO05D010026 1.2e-12 77.0 128 43.0
THA.LOC104812118 Tarenaya hassleriana HOM05D007960 ORTHO05D010026 1.2e-12 77.0 118 45.8
Thecc.03G114600 Theobroma cacao HOM05D007960 ORTHO05D010026 1.2e-12 77.0 74 54.1
TAR371G0138 Trochodendron aralioides HOM05D007960 ORTHO05D010026 1.5e-12 76.6 78 52.6
FAN13G1649 Fragaria x ananassa HOM05D000227 ORTHO05D001491 3.4e-12 75.5 99 48.5
Sopen03g033530 Solanum pennellii HOM05D007960 ORTHO05D010026 3.4e-12 75.5 88 52.3
Peaxi162Scf00017g03010 Petunia axillaris HOM05D007960 ORTHO05D001491 4.4e-12 75.1 89 52.8
AT1G74055 Arabidopsis thaliana HOM05D007960 ORTHO05D010026 5.7e-12 74.7 134 40.3
Thhalv10019432m.g Eutrema salsugineum HOM05D007960 ORTHO05D010026 7.5e-12 74.3 130 40.8
Solyc03g114430.1 Solanum lycopersicum HOM05D007960 ORTHO05D010026 1.3e-11 73.6 87 50.6
FAN18G0932 Fragaria x ananassa HOM05D000227 ORTHO05D001491 1.7e-11 73.2 96 47.9
Gohir.D03G100500 Gossypium hirsutum HOM05D007960 ORTHO05D010026 2.2e-11 72.8 96 44.8
Gorai.003G106000 Gossypium raimondii HOM05D007960 ORTHO05D010026 2.2e-11 72.8 96 44.8
Lalb_Chr12g0197501 Lupinus albus HOM05D007960 ORTHO05D010026 2.8e-11 72.4 85 51.8
Rhsim11G0054500 Rhododendron simsii HOM05D007960 ORTHO05D010026 3.7e-11 72.0 111 45.0
Aa31LG4G4360 Aethionema arabicum HOM05D007960 ORTHO05D010026 4.8e-11 71.6 130 40.8
Cfa019847 Carpinus fangiana HOM05D007960 ORTHO05D010026 4.8e-11 71.6 105 46.7
Gohir.A03G074200 Gossypium hirsutum HOM05D007960 ORTHO05D010026 4.8e-11 71.6 96 44.8
Rhsim08G0149000 Rhododendron simsii HOM05D007960 ORTHO05D010026 4.8e-11 71.6 118 42.4
Nitab4.5_0000646g0060 Nicotiana tabacum HOM05D007960 ORTHO05D010026 6.3e-11 71.2 96 50.0
RcHm_v2.0_Chr7g0184281 Rosa chinensis HOM05D007960 ORTHO05D010026 1.1e-10 70.5 115 42.6
Sc04g0003840 Simmondsia chinensis HOM05D007960 ORTHO05D010026 1.1e-10 70.5 113 43.4
Sp5g29280 Schrenkiella parvula HOM05D007960 ORTHO05D010026 1.4e-10 70.1 117 39.3
Cpa.g.sc13.82 Carica papaya HOM05D007960 ORTHO05D010026 4.1e-10 68.6 130 43.8
Dinv38606 Davidia involucrata HOM05D000227 ORTHO05D001491 5.4e-10 68.2 77 54.5
Sc04g0003850 Simmondsia chinensis HOM05D007960 ORTHO05D010026 5.4e-10 68.2 113 42.5
ClCG04G011400 Citrullus lanatus HOM05D007960 ORTHO05D010026 1.2e-09 67.0 104 44.2
Ah.11g047280 Amaranthus hybridus HOM05D007960 ORTHO05D010026 3.5e-09 65.5 114 44.7
Prupe.5G214000 Prunus persica HOM05D007960 ORTHO05D010026 3.5e-09 65.5 136 39.7
PGSC0003DMG400041876 Solanum tuberosum HOM05D007960 ORTHO05D010026 5.9e-09 64.7 85 49.4
Sed0018526 Sechium edule HOM05D007960 ORTHO05D010026 2.9e-08 62.4 101 40.6
CANSAT80G0727 Cannabis sativa HOM05D007960 ORTHO05D010026 5.0e-08 61.6 110 39.1
Sc04g0003950 Simmondsia chinensis HOM05D007960 ORTHO05D010026 5.0e-08 61.6 113 41.6
PSO063G1775 Papaver somniferum HOM05D007960 ORTHO05D010026 1.1e-07 60.5 101 37.6
Lsat_1_v5_gn_1_15660 Lactuca sativa HOM05D007960 ORTHO05D010026 1.9e-07 59.7 102 43.1
PSO782G5681 Papaver somniferum HOM05D007960 ORTHO05D010026 3.2e-07 58.9 103 37.9
BraA07t30596Z Brassica rapa HOM05D007960 ORTHO05D010026 4.2e-07 58.5 139 33.1
AUR62036925 Chenopodium quinoa HOM05D007960 ORTHO05D010026 9.4e-07 57.4 71 49.3
PGR044G2003 Punica granatum HOM05D007960 ORTHO05D010026 1.6e-06 56.6 63 44.4
Duzib205G0322 Durio zibethinus HOM05D007960 ORTHO05D010026 4.7e-06 55.1 64 43.8


User provided reference genes

Program Settings