Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G30995 Trifolium pratense HOM05D005412 ORTHO05D006096 3.1e-105 385.2 198 100.0
Medtr4g086370 Medicago truncatula HOM05D005412 ORTHO05D006096 7.8e-101 370.5 198 94.4
Ca_18676_v3 Cicer arietinum L. HOM05D005412 ORTHO05D006096 3.6e-98 361.7 198 91.4
Psat7g124160 Pisum sativum HOM05D005412 ORTHO05D006096 6.2e-98 360.9 198 93.9
Lj4g0027932 Lotus japonicus HOM05D005412 ORTHO05D006096 8.6e-92 340.5 197 86.3
Lalb_Chr09g0328271 Lupinus albus HOM05D005412 ORTHO05D006096 7.3e-91 337.4 198 85.9
Phvul.003G295800 Phaseolus vulgaris HOM05D005412 ORTHO05D006096 4.7e-90 334.7 198 85.4
Glyma.07G211600 Glycine max HOM05D005412 ORTHO05D006096 2.6e-88 328.9 198 84.3
Glyma.02G133400 Glycine max HOM05D005412 ORTHO05D006096 5.8e-88 327.8 198 84.8
VMungo0251G1021 Vigna mungo HOM05D005412 ORTHO05D006096 3.8e-87 325.1 198 82.3
arahy.Tifrunner.gnm1.ann1.4LZP30 Arachis hypogaea HOM05D005412 ORTHO05D006096 3.0e-84 315.5 198 81.3
arahy.Tifrunner.gnm1.ann1.Q5Y61J Arachis hypogaea HOM05D005412 ORTHO05D006096 5.1e-84 314.7 196 81.6
Prupe.8G123400 Prunus persica HOM05D005412 ORTHO05D006096 5.1e-84 314.7 198 79.3
Atru.chr5.2729 Acer truncatum HOM05D005412 ORTHO05D006096 6.6e-84 314.3 200 77.5
GSVIVG01031759001 Vitis vinifera HOM05D005412 ORTHO05D006096 1.5e-83 313.2 198 77.8
Haze_01830 Corylus avellana HOM05D005412 ORTHO05D006096 1.9e-83 312.8 198 77.8
FAN15G2385 Fragaria x ananassa HOM05D005412 ORTHO05D006096 3.3e-83 312.0 198 79.8
FAN24G2004 Fragaria x ananassa HOM05D005412 ORTHO05D006096 3.3e-83 312.0 198 79.8
FvH4_2g06211 Fragaria vesca HOM05D005412 ORTHO05D006096 7.3e-83 310.8 198 79.8
Sed0007905 Sechium edule HOM05D005412 ORTHO05D006096 2.4e-81 305.8 198 76.3
RcHm_v2.0_Chr6g0256971 Rosa chinensis HOM05D005412 ORTHO05D006096 3.1e-81 305.4 198 76.8
Dinv42150 Davidia involucrata HOM05D005412 ORTHO05D006096 5.3e-81 304.7 198 74.2
ClCG05G010030 Citrullus lanatus HOM05D005412 ORTHO05D006096 6.9e-81 304.3 198 76.3
CsaV3_3G018540 Cucumis sativus L. HOM05D005412 ORTHO05D006096 6.9e-81 304.3 198 76.3
TWI75G0165 Tripterygium wilfordii HOM05D005412 ORTHO05D006096 2.6e-80 302.4 198 75.8
Aqoxy5G01253 Aquilegia oxysepala HOM05D005412 ORTHO05D006096 3.4e-80 302.0 198 74.2
Dinv23615 Davidia involucrata HOM05D005412 ORTHO05D006096 3.4e-80 302.0 198 73.7
Ciclev10027665m.g Citrus clementina HOM05D005412 ORTHO05D006096 4.4e-80 301.6 198 75.3
MELO3C019513.2 Cucumis melo HOM05D005412 ORTHO05D006096 9.9e-80 300.4 198 74.7
Manes.10G065500 Manihot esculenta HOM05D005412 ORTHO05D006096 1.3e-79 300.1 198 74.2
Rhsim11G0166400 Rhododendron simsii HOM05D005412 ORTHO05D006096 2.9e-79 298.9 198 73.2
TWI79G0096 Tripterygium wilfordii HOM05D005412 ORTHO05D006096 3.8e-79 298.5 198 73.7
CiPaw.06G143300 Carya illinoinensis HOM05D005412 ORTHO05D006096 4.9e-79 298.1 198 73.2
COL.COLO4_32667 Corchorus olitorius HOM05D005412 ORTHO05D006096 8.4e-79 297.4 198 73.7
MD05G1079500 Malus domestica HOM05D005412 ORTHO05D006096 8.4e-79 297.4 198 75.8
Oeu025573.1 Olea europaea HOM05D005412 ORTHO05D006096 8.4e-79 297.4 198 70.7
Thecc.02G099500 Theobroma cacao HOM05D005412 ORTHO05D006096 8.4e-79 297.4 198 73.2
CSS0011349 Camellia sinensis var. sinensis HOM05D005412 ORTHO05D006096 3.2e-78 295.4 198 71.2
QL11p036050 Quercus lobata HOM05D005412 ORTHO05D006096 3.2e-78 295.4 198 73.2
TAR628G0752 Trochodendron aralioides HOM05D005412 ORTHO05D006096 2.7e-77 292.4 198 71.2
Duzib248G0232 Durio zibethinus HOM05D005412 ORTHO05D006096 3.5e-77 292.0 198 73.2
Nn5g30243 Nelumbo nucifera HOM05D005412 ORTHO05D006096 1.7e-76 289.7 198 70.7
PSO170G0229 Papaver somniferum HOM05D005412 ORTHO05D006096 1.7e-76 289.7 198 70.7
PSO210G3961 Papaver somniferum HOM05D005412 ORTHO05D006096 2.3e-76 289.3 198 70.7
Potri.009G102900 Populus trichocarpa HOM05D005412 ORTHO05D006096 3.0e-76 288.9 199 72.9
CiPaw.05G051900 Carya illinoinensis HOM05D005412 ORTHO05D006096 3.9e-76 288.5 198 71.2
Cpa.g.sc62.21 Carica papaya HOM05D005412 ORTHO05D006096 5.1e-76 288.1 198 71.7
Eucgr.I01159 Eucalyptus grandis HOM05D005412 ORTHO05D006096 8.7e-76 287.3 198 71.7
Migut.B00339 Erythranthe guttata HOM05D005412 ORTHO05D006096 1.1e-75 287.0 198 69.7
CAN.G1041.23 Capsicum annuum HOM05D005412 ORTHO05D006096 1.5e-75 286.6 198 69.2
Thhalv10019879m.g Eutrema salsugineum HOM05D005412 ORTHO05D006096 1.5e-75 286.6 198 70.7
Peaxi162Scf00016g01825 Petunia axillaris HOM05D005412 ORTHO05D006096 2.5e-75 285.8 198 69.2
THA.LOC104800351 Tarenaya hassleriana HOM05D005412 ORTHO05D006096 2.5e-75 285.8 198 70.2
Cc02_g18700 Coffea canephora HOM05D005412 ORTHO05D006096 3.3e-75 285.4 198 68.7
Potri.004G141700 Populus trichocarpa HOM05D005412 ORTHO05D006096 4.3e-75 285.0 199 71.4
AUR62016617 Chenopodium quinoa HOM05D005412 ORTHO05D006096 9.6e-75 283.9 198 69.2
AUR62011444 Chenopodium quinoa HOM05D005412 ORTHO05D006096 1.3e-74 283.5 198 69.2
MD10G1093800 Malus domestica HOM05D005412 ORTHO05D006096 1.3e-74 283.5 198 72.2
Gohir.A03G189900 Gossypium hirsutum HOM05D005412 ORTHO05D006096 1.6e-74 283.1 202 69.8
Gohir.D02G210500 Gossypium hirsutum HOM05D005412 ORTHO05D006096 1.6e-74 283.1 202 69.8
A05p30450 Brassica napus HOM05D005412 ORTHO05D006096 2.8e-74 282.3 198 68.7
BraA05t21884Z Brassica rapa HOM05D005412 ORTHO05D006096 2.8e-74 282.3 198 68.7
DCAR_022030 Daucus carota HOM05D005412 ORTHO05D006096 3.6e-74 282.0 198 67.2
BcaNung06981 Brassica carinata HOM05D005412 ORTHO05D006096 4.8e-74 281.6 198 68.7
C05p46050 Brassica napus HOM05D005412 ORTHO05D006096 4.8e-74 281.6 198 68.7
BolC5t33332H Brassica oleracea HOM05D005412 ORTHO05D006096 4.8e-74 281.6 198 68.7
Solyc01g108160.3 Solanum lycopersicum HOM05D005412 ORTHO05D006096 8.1e-74 280.8 198 68.7
Sopen01g050390 Solanum pennellii HOM05D005412 ORTHO05D006096 8.1e-74 280.8 198 68.7
Sp3g17260 Schrenkiella parvula HOM05D005412 ORTHO05D006096 2.4e-73 279.3 198 68.7
TAR376G0189 Trochodendron aralioides HOM05D005412 ORTHO05D006096 6.9e-73 277.7 199 67.8
Carub.0003s1902 Capsella rubella HOM05D005412 ORTHO05D006096 9.0e-73 277.3 198 67.2
Aa31LG8G5990 Aethionema arabicum HOM05D005412 ORTHO05D006096 1.5e-72 276.6 198 68.7
AL3G32570 Arabidopsis lyrata HOM05D005412 ORTHO05D006096 1.5e-72 276.6 198 67.2
BcaB06g25975 Brassica carinata HOM05D005412 ORTHO05D006096 1.5e-72 276.6 198 67.7
CARHR094600 Cardamine hirsuta HOM05D005412 ORTHO05D006096 2.0e-72 276.2 198 67.2
Duzib052G1101 Durio zibethinus HOM05D005412 ORTHO05D006096 4.5e-72 275.0 195 70.3
AT3G19190 Arabidopsis thaliana HOM05D005412 ORTHO05D006096 7.6e-72 274.2 198 66.7
ECA240G0709 Erigeron canadensis HOM05D005412 ORTHO05D006096 1.7e-71 273.1 198 66.2
Nitab4.5_0003503g0010 Nicotiana tabacum HOM05D005412 ORTHO05D006096 2.2e-71 272.7 186 70.4
Ah.02g117120 Amaranthus hybridus HOM05D005412 ORTHO05D006096 3.8e-71 271.9 198 66.7
ATR0100G063 Amborella trichopoda HOM05D005412 ORTHO05D006096 6.4e-71 271.2 198 64.6
Nitab4.5_0003080g0090 Nicotiana tabacum HOM05D005412 ORTHO05D006096 1.1e-70 270.4 186 69.9
Gorai.005G238500 Gossypium raimondii HOM05D005412 ORTHO05D006096 5.5e-70 268.1 230 61.3
Lsat_1_v5_gn_9_110121 Lactuca sativa HOM05D005412 ORTHO05D006096 1.2e-69 266.9 196 64.8
Actinidia12956 Actinidia chinensis HOM05D005412 ORTHO05D006096 1.6e-69 266.5 178 72.5
HanXRQChr03g0072341 Helianthus annuus HOM05D005412 ORTHO05D006096 2.7e-69 265.8 199 66.3
Hund00331 Selenicereus undatus HOM05D005412 ORTHO05D006096 3.9e-68 261.9 198 65.2
SGA_v2.0_scaffold90G27665 Striga asiatica HOM05D005412 ORTHO05D006096 5.1e-68 261.5 198 66.2
MBI02_g17325_MAGBIO Magnolia biondii HOM05D005412 ORTHO05D006096 2.5e-67 259.2 198 62.6
CDE09G1277 Ceratophyllum demersum HOM05D005412 ORTHO05D006096 5.6e-67 258.1 198 59.6
Sabra09G0078800 Salix brachista HOM05D005412 ORTHO05D006096 9.6e-67 257.3 211 65.4
FAN27G2299 Fragaria x ananassa HOM05D005412 ORTHO05D006096 1.3e-66 256.9 198 70.7
unitig_21.g20750 Utricularia gibba HOM05D005412 ORTHO05D006096 2.6e-64 249.2 198 60.1
Sc14g0001650 Simmondsia chinensis HOM05D005412 ORTHO05D006096 4.5e-64 248.4 186 63.4
vmacro02202 Vaccinium macrocarpon HOM05D005412 ORTHO05D006096 2.2e-63 246.1 198 62.1
Lj9C358T17 Lonicera japonica HOM05D005412 ORTHO05D006096 6.5e-63 244.6 192 66.1
HPP92_028321 Vanilla planifolia HOM05D005412 ORTHO05D006096 4.2e-62 241.9 198 55.6
EL10Ac9g21835 Beta vulgaris HOM05D005412 ORTHO05D006096 7.1e-62 241.1 225 56.4
Zm00001eb280540 Zea mays HOM05D005412 ORTHO05D006096 9.3e-62 240.7 198 53.5
Zm00001eb380180 Zea mays HOM05D005412 ORTHO05D006096 3.9e-60 235.3 198 52.0
Os06g0267600 Oryza sativa ssp. japonica HOM05D005412 ORTHO05D006096 3.3e-59 232.3 198 50.0
Sabra04G0093700 Salix brachista HOM05D005412 ORTHO05D006096 1.3e-52 210.3 191 61.3
AagrBONN_evm.TU.Sc2ySwM_369.474 Anthoceros agrestis HOM05D005412 ORTHO05D006096 5.1e-52 208.4 196 51.5
Mapoly0038s0067 Marchantia polymorpha HOM05D005412 ORTHO05D006096 1.1e-51 207.2 196 49.0
SEGI_28745 Sequoiadendron giganteum HOM05D005412 ORTHO05D006096 5.7e-51 204.9 177 52.5
Actinidia00446 Actinidia chinensis HOM05D005412 ORTHO05D006096 2.9e-47 192.6 198 51.0
SMO196G0062 Selaginella moellendorffii HOM05D005412 ORTHO05D006096 6.7e-44 181.4 212 46.2
Hma1.2p1_0028F.1_g017490 Hydrangea macrophylla HOM05D005412 ORTHO05D006096 6.5e-31 138.3 83 72.3
Pp3c13_15610 Physcomitrium patens HOM05D005412 ORTHO05D006096 1.4e-28 130.6 110 51.8
MCO03G368 Micromonas commoda HOM05D005412 ORTHO05D006096 8.5e-23 111.3 198 33.8
Cre09.g408950 Chlamydomonas reinhardtii HOM05D005412 ORTHO05D006096 8.3e-18 94.7 105 40.0
Rhsim11G0175200 Rhododendron simsii HOM05D063897 ORTHO05D006096 1.2e-13 80.9 98 48.0
Hma1.2p1_0027F.1_g017200 Hydrangea macrophylla HOM05D005412 ORTHO05D006096 3.4e-11 72.8 55 58.2
PRCOL_00003309 Prasinoderma coloniale HOM05D005412 ORTHO05D006096 3.4e-11 72.8 117 32.5
SHI05371 Sapria himalayana HOM05D005412 ORTHO05D006096 2.8e-10 69.7 78 55.1
SHI05372 Sapria himalayana HOM05D005412 ORTHO05D006096 8.6e-07 58.2 46 52.2
CBR_g37896 Chara braunii HOM05D012618 ORTHO05D000497 1.1e-06 57.8 37 67.6


User provided reference genes

Program Settings