Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G30952 Trifolium pratense HOM05D000716 ORTHO05D020342 7.8e-172 607.1 313 100.0
TPR.G32765 Trifolium pratense HOM05D000716 ORTHO05D009512 5.3e-120 434.9 300 80.0
TPR.G15873 Trifolium pratense HOM05D000716 ORTHO05D020342 4.8e-105 385.2 330 66.7
Glyma.02G001400 Glycine max HOM05D000716 ORTHO05D009512 8.8e-99 364.4 299 67.6
Psat0s152g0120 Pisum sativum HOM05D000716 ORTHO05D009512 4.8e-97 358.6 299 67.6
Ca_09881_v3 Cicer arietinum L. HOM05D000716 ORTHO05D009512 1.0e-91 340.9 299 63.2
TPR.G14029 Trifolium pratense HOM05D000716 ORTHO05D009512 1.0e-91 340.9 309 60.8
Medtr1g076400 Medicago truncatula HOM05D000716 ORTHO05D009512 1.1e-88 330.9 299 61.2
Psat6g113600 Pisum sativum HOM05D000716 ORTHO05D009512 1.8e-88 330.1 299 61.5
Lalb_Chr06g0168971 Lupinus albus HOM05D000716 ORTHO05D009512 6.1e-84 315.1 301 58.1
QL06p014932 Quercus lobata HOM05D000716 ORTHO05D009512 2.3e-83 313.2 299 58.5
arahy.Tifrunner.gnm1.ann1.430W4N Arachis hypogaea HOM05D000716 ORTHO05D009512 8.9e-83 311.2 299 60.2
arahy.Tifrunner.gnm1.ann1.FW0N61 Arachis hypogaea HOM05D000716 ORTHO05D009512 4.4e-82 308.9 299 59.9
Manes.04G103400 Manihot esculenta HOM05D000716 ORTHO05D009512 1.1e-80 304.3 300 56.7
Cfa008405 Carpinus fangiana HOM05D000716 ORTHO05D009512 1.9e-80 303.5 307 56.4
Prupe.1G025700 Prunus persica HOM05D000716 ORTHO05D009512 2.0e-79 300.1 308 54.2
CiPaw.02G118200 Carya illinoinensis HOM05D000716 ORTHO05D009512 8.6e-78 294.7 299 56.2
MD16G1204600 Malus domestica HOM05D000716 ORTHO05D009512 1.9e-77 293.5 300 56.3
Lj5g0002941 Lotus japonicus HOM05D000716 ORTHO05D009512 9.5e-77 291.2 299 55.5
MD13G1203200 Malus domestica HOM05D000716 ORTHO05D009512 2.8e-76 289.7 300 54.3
Potri.010G079200 Populus trichocarpa HOM05D000716 ORTHO05D009512 6.2e-76 288.5 300 54.0
FvH4_4g01981 Fragaria vesca HOM05D000716 ORTHO05D009512 1.1e-75 287.7 299 54.5
FAN12G4304 Fragaria x ananassa HOM05D000716 ORTHO05D009512 3.1e-75 286.2 299 54.2
Haze_11263 Corylus avellana HOM05D000716 ORTHO05D009512 4.0e-75 285.8 307 54.7
RcHm_v2.0_Chr4g0388951 Rosa chinensis HOM05D000716 ORTHO05D009512 2.0e-74 283.5 299 54.8
FAN22G1663 Fragaria x ananassa HOM05D000716 ORTHO05D009512 1.7e-73 280.4 299 53.5
Thecc.04G243000 Theobroma cacao HOM05D000716 ORTHO05D009512 1.6e-71 273.9 298 52.7
CANSAT78G2038 Cannabis sativa HOM05D000716 ORTHO05D009512 1.3e-70 270.8 299 51.5
Sabra10G0063700 Salix brachista HOM05D000716 ORTHO05D009512 1.7e-70 270.4 300 51.7
TAR365G0786 Trochodendron aralioides HOM05D000716 ORTHO05D009512 5.1e-70 268.9 299 51.5
Dinv44606 Davidia involucrata HOM05D000716 ORTHO05D009512 1.9e-69 266.9 299 52.8
GSVIVG01018088001 Vitis vinifera HOM05D000716 ORTHO05D009512 4.3e-69 265.8 305 51.8
Gohir.A09G221500 Gossypium hirsutum HOM05D000716 ORTHO05D009512 9.5e-69 264.6 300 50.3
Gorai.006G245100 Gossypium raimondii HOM05D000716 ORTHO05D009512 1.2e-68 264.2 300 50.3
Phvul.003G138252 Phaseolus vulgaris HOM05D000716 ORTHO05D009512 3.6e-68 262.7 299 51.2
Glyma.10G179500 Glycine max HOM05D000716 ORTHO05D009512 4.7e-68 262.3 299 50.8
Eucgr.H03185 Eucalyptus grandis HOM05D000716 ORTHO05D009512 1.2e-66 257.7 299 49.5
Gohir.D09G223600 Gossypium hirsutum HOM05D000716 ORTHO05D009512 8.3e-65 251.5 300 48.7
Actinidia05472 Actinidia chinensis HOM05D000716 ORTHO05D009512 4.6e-63 245.7 301 50.2
Psat4g152480 Pisum sativum HOM05D000716 ORTHO05D009512 8.6e-62 241.5 297 52.5
Atru.chr4.2291 Acer truncatum HOM05D000716 ORTHO05D009512 3.3e-61 239.6 300 48.7
Aqoxy2G03501 Aquilegia oxysepala HOM05D000716 ORTHO05D009512 3.6e-60 236.1 299 46.5
Rhsim02G0032200 Rhododendron simsii HOM05D000716 ORTHO05D009512 1.8e-59 233.8 299 47.8
PGR004G1429 Punica granatum HOM05D000716 ORTHO05D009512 3.1e-59 233.0 299 45.5
VMungo0720G2630 Vigna mungo HOM05D000716 ORTHO05D009512 6.8e-59 231.9 280 50.0
vmacro15398 Vaccinium macrocarpon HOM05D000716 ORTHO05D009512 9.9e-58 228.0 298 46.6
COL.COLO4_15759 Corchorus olitorius HOM05D000716 ORTHO05D009512 2.9e-57 226.5 297 46.5
Duzib212G0257 Durio zibethinus HOM05D000716 ORTHO05D009512 1.6e-55 220.7 300 44.3
MSTRG.21886 Avicennia marina HOM05D000716 ORTHO05D009512 2.7e-55 219.9 299 44.8
Psat4g201760 Pisum sativum HOM05D000716 ORTHO05D009512 2.7e-55 219.9 216 59.7
Migut.N00228 Erythranthe guttata HOM05D000716 ORTHO05D009512 1.3e-54 217.6 296 45.3
Nitab4.5_0001856g0060 Nicotiana tabacum HOM05D000716 ORTHO05D009512 1.7e-54 217.2 299 43.5
Ciclev10004235m.g Citrus clementina HOM05D000716 ORTHO05D009512 5.1e-54 215.7 297 45.1
DCAR_024195 Daucus carota HOM05D000716 ORTHO05D009512 5.1e-54 215.7 299 43.5
CAN.G749.27 Capsicum annuum HOM05D000716 ORTHO05D009512 1.1e-53 214.5 299 44.5
Nitab4.5_0001787g0020 Nicotiana tabacum HOM05D000716 ORTHO05D009512 2.5e-53 213.4 299 44.5
PSO461G0082 Papaver somniferum HOM05D000716 ORTHO05D009512 2.1e-52 210.3 299 44.1
PGSC0003DMG400006102 Solanum tuberosum HOM05D000716 ORTHO05D009512 2.4e-51 206.8 300 43.3
SGA_v2.0_scaffold79G25617 Striga asiatica HOM05D000716 ORTHO05D009512 2.4e-51 206.8 299 41.1
Cc03_g04580 Coffea canephora HOM05D000716 ORTHO05D009512 4.4e-50 202.6 308 43.2
Oeu032619.1 Olea europaea HOM05D000716 ORTHO05D009512 1.7e-49 200.7 299 42.1
Sopen09g031940 Solanum pennellii HOM05D000716 ORTHO05D009512 4.9e-49 199.1 300 42.3
Psat6g136800 Pisum sativum HOM05D003763 ORTHO05D004315 1.4e-48 197.6 132 81.1
TPR.G21298 Trifolium pratense HOM05D001538 ORTHO05D000007 1.5e-45 187.6 167 69.5
HanXRQChr13g0424651 Helianthus annuus HOM05D000716 ORTHO05D009512 2.5e-45 186.8 299 39.8
ECA240G2824 Erigeron canadensis HOM05D000716 ORTHO05D009512 4.8e-44 182.6 302 40.1
Medtr1g040915 Medicago truncatula HOM05D000716 ORTHO05D020342 9.0e-43 178.3 259 47.5
Glyma.10G001766 Glycine max HOM05D000716 ORTHO05D020342 2.9e-41 173.3 122 74.6
Lsat_1_v5_gn_3_124900 Lactuca sativa HOM05D000716 ORTHO05D009512 1.4e-40 171.0 299 36.8
CDE07G1951 Ceratophyllum demersum HOM05D000716 ORTHO05D009512 1.3e-38 164.5 300 38.3
Psat6g136840 Pisum sativum HOM05D000716 ORTHO05D009512 1.1e-37 161.4 118 68.6
Psat4g201640 Pisum sativum HOM05D000716 ORTHO05D009512 4.8e-36 156.0 178 56.2
Medtr1g040985 Medicago truncatula HOM05D000716 ORTHO05D020342 1.1e-35 154.8 247 42.9
ATR0665G362 Amborella trichopoda HOM05D000716 ORTHO05D009512 4.0e-35 152.9 303 36.0
CSS0040365 Camellia sinensis var. sinensis HOM05D000716 ORTHO05D009512 2.6e-34 150.2 178 50.6
Cpa.g.sc58.13 Carica papaya HOM05D000716 ORTHO05D020342 1.3e-33 147.9 179 49.2
Psat1g100320 Pisum sativum HOM05D000716 ORTHO05D009512 1.3e-33 147.9 98 72.4
CSS0039216 Camellia sinensis var. sinensis HOM05D000716 ORTHO05D009512 1.7e-33 147.5 178 50.0
HPP92_000594 Vanilla planifolia HOM05D000716 ORTHO05D009512 2.9e-33 146.7 321 33.6
Medtr1g040955 Medicago truncatula HOM05D000716 ORTHO05D020342 1.8e-30 137.5 108 73.1
SEGI_36693 Sequoiadendron giganteum HOM05D000716 ORTHO05D009512 1.4e-27 127.9 299 33.4
Lj6P652T26 Lonicera japonica HOM05D000716 ORTHO05D009512 4.2e-24 116.3 108 61.1
CSS0024613 Camellia sinensis var. sinensis HOM05D000716 ORTHO05D009512 1.8e-22 110.9 110 53.6
CSS0035052 Camellia sinensis var. sinensis HOM05D000716 ORTHO05D009512 1.8e-22 110.9 110 53.6
Nn3g19490 Nelumbo nucifera HOM05D000716 ORTHO05D009512 1.8e-19 100.9 108 49.1
AagrBONN_evm.TU.Sc2ySwM_228.2520 Anthoceros agrestis HOM05D000716 ORTHO05D009512 3.9e-14 83.2 294 27.6
TPR.G36718 Trifolium pratense HOM05D061135 ORTHO05D413191 8.2e-12 75.5 81 48.1


User provided reference genes

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