Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G30923 Trifolium pratense HOM05D005395 ORTHO05D006352 2.8e-271 937.9 460 100.0
Psat5g193800 Pisum sativum HOM05D005395 ORTHO05D006352 1.6e-181 639.8 364 88.2
Ca_14376_v3 Cicer arietinum L. HOM05D005395 ORTHO05D006352 1.5e-166 590.1 341 87.1
Lalb_Chr13g0291151 Lupinus albus HOM05D005395 ORTHO05D006352 1.5e-158 563.5 362 76.5
Phvul.005G021500 Phaseolus vulgaris HOM05D005395 ORTHO05D006352 2.7e-157 559.3 366 75.4
VMungo1080G1687 Vigna mungo HOM05D005395 ORTHO05D006352 5.2e-156 555.1 366 74.3
Glyma.15G274000 Glycine max HOM05D005395 ORTHO05D006352 1.1e-153 547.4 360 74.7
arahy.Tifrunner.gnm1.ann1.XBA78H Arachis hypogaea HOM05D005395 ORTHO05D006352 7.7e-152 541.2 383 71.3
Lj3g0013961 Lotus japonicus HOM05D005395 ORTHO05D006352 5.6e-150 535.0 366 73.2
Glyma.08G155900 Glycine max HOM05D005395 ORTHO05D006352 8.0e-149 531.2 358 73.5
Cfa008089 Carpinus fangiana HOM05D005395 ORTHO05D006352 3.6e-125 452.6 374 62.8
Prupe.2G012600 Prunus persica HOM05D005395 ORTHO05D006352 1.2e-123 447.6 375 61.6
RcHm_v2.0_Chr1g0315901 Rosa chinensis HOM05D005395 ORTHO05D006352 5.8e-123 445.3 375 61.6
MD07G1010300 Malus domestica HOM05D005395 ORTHO05D006352 1.7e-122 443.7 375 59.5
CiPaw.13G004500 Carya illinoinensis HOM05D005395 ORTHO05D006352 6.4e-122 441.8 373 61.7
Ciclev10030541m.g Citrus clementina HOM05D005395 ORTHO05D006352 9.2e-121 438.0 368 59.8
Sabra03G0014300 Salix brachista HOM05D005395 ORTHO05D006352 9.2e-121 438.0 392 58.4
Potri.003G022600 Populus trichocarpa HOM05D005395 ORTHO05D006352 2.7e-120 436.4 392 58.2
QL11p003492 Quercus lobata HOM05D005395 ORTHO05D006352 1.7e-119 433.7 369 59.9
TWI09G1525 Tripterygium wilfordii HOM05D005395 ORTHO05D006352 5.1e-119 432.2 368 60.3
FAN06G4072 Fragaria x ananassa HOM05D005395 ORTHO05D006352 6.6e-119 431.8 374 60.2
QL05p060653 Quercus lobata HOM05D005395 ORTHO05D006352 6.6e-119 431.8 368 60.3
FvH4_7g01000 Fragaria vesca HOM05D005395 ORTHO05D006352 7.3e-118 428.3 374 59.6
FAN03G2830 Fragaria x ananassa HOM05D005395 ORTHO05D006352 9.6e-118 427.9 373 60.1
FAN10G2468 Fragaria x ananassa HOM05D005395 ORTHO05D006352 4.7e-117 425.6 374 59.6
Rhsim07G0055200 Rhododendron simsii HOM05D005395 ORTHO05D006352 6.2e-117 425.2 368 60.1
TAR633G2667 Trochodendron aralioides HOM05D005395 ORTHO05D006352 4.0e-116 422.5 376 59.0
Atru.chr11.731 Acer truncatum HOM05D005395 ORTHO05D006352 1.5e-115 420.6 366 58.5
GSVIVG01032086001 Vitis vinifera HOM05D005395 ORTHO05D006352 2.0e-115 420.2 356 61.2
Sed0006979 Sechium edule HOM05D005395 ORTHO05D006352 4.4e-115 419.1 377 58.4
ClCG10G012430 Citrullus lanatus HOM05D005395 ORTHO05D006352 9.9e-115 417.9 375 57.6
Nn7g36191 Nelumbo nucifera HOM05D005395 ORTHO05D006352 3.8e-114 416.0 381 57.7
COL.COLO4_04642 Corchorus olitorius HOM05D005395 ORTHO05D006352 6.4e-114 415.2 370 57.8
MELO3C023972.2 Cucumis melo HOM05D005395 ORTHO05D006352 9.3e-113 411.4 377 57.6
QL02p026227 Quercus lobata HOM05D005395 ORTHO05D006352 1.2e-112 411.0 335 61.8
PGR042G3169 Punica granatum HOM05D005395 ORTHO05D006352 2.1e-112 410.2 369 56.4
CANSAT78G1614 Cannabis sativa HOM05D005395 ORTHO05D006352 3.0e-111 406.4 374 55.6
Oeu063172.1 Olea europaea HOM05D005395 ORTHO05D006352 1.9e-110 403.7 373 54.7
Lj7C570T8 Lonicera japonica HOM05D005395 ORTHO05D006352 3.3e-110 402.9 369 57.2
Nitab4.5_0000634g0140 Nicotiana tabacum HOM05D005395 ORTHO05D006352 1.3e-106 391.0 368 57.1
Nitab4.5_0013258g0010 Nicotiana tabacum HOM05D005395 ORTHO05D006352 1.7e-106 390.6 369 56.6
SHI19148 Sapria himalayana HOM05D005395 ORTHO05D006352 1.7e-106 390.6 373 55.2
CAN.G1820.1 Capsicum annuum HOM05D005395 ORTHO05D006352 1.9e-105 387.1 368 56.2
DCAR_005449 Daucus carota HOM05D005395 ORTHO05D006352 7.1e-105 385.2 371 54.4
QL12p011919 Quercus lobata HOM05D005395 ORTHO05D006352 9.3e-105 384.8 318 60.7
EL10Ac1g02254 Beta vulgaris HOM05D005395 ORTHO05D006352 1.8e-103 380.6 396 51.5
AUR62041247 Chenopodium quinoa HOM05D005395 ORTHO05D006352 6.7e-103 378.6 397 49.9
Peaxi162Scf00428g00318 Petunia axillaris HOM05D005395 ORTHO05D006352 2.5e-102 376.7 370 55.4
Cpa.g.sc245.16 Carica papaya HOM05D005395 ORTHO05D006352 4.8e-101 372.5 320 58.1
Hund24995 Selenicereus undatus HOM05D005395 ORTHO05D006352 8.1e-101 371.7 355 54.4
Gohir.D04G018600 Gossypium hirsutum HOM05D005395 ORTHO05D006352 1.4e-100 370.9 367 55.3
Gorai.012G022200 Gossypium raimondii HOM05D005395 ORTHO05D006352 4.0e-100 369.4 367 55.0
Solyc01g087095.2 Solanum lycopersicum HOM05D005395 ORTHO05D006352 1.3e-98 364.4 371 52.3
BolC9t58856H Brassica oleracea HOM05D005395 ORTHO05D006352 2.9e-98 363.2 358 52.5
HanXRQChr12g0379891 Helianthus annuus HOM05D005395 ORTHO05D006352 2.9e-98 363.2 360 53.3
Aqoxy1G02896 Aquilegia oxysepala HOM05D005395 ORTHO05D006352 4.9e-98 362.5 406 49.3
Sp6g27270 Schrenkiella parvula HOM05D005395 ORTHO05D006352 1.4e-97 360.9 357 52.9
SGA_v2.0_scaffold119G32730 Striga asiatica HOM05D005395 ORTHO05D006352 1.9e-97 360.5 373 49.1
Sopen01g034170 Solanum pennellii HOM05D005395 ORTHO05D006352 2.4e-97 360.1 375 51.5
Gohir.A05G396700 Gossypium hirsutum HOM05D005395 ORTHO05D006352 3.2e-97 359.8 367 54.0
unitig_0.g1385 Utricularia gibba HOM05D005395 ORTHO05D006352 3.2e-97 359.8 356 52.0
HPP92_011342 Vanilla planifolia HOM05D005395 ORTHO05D006352 4.2e-97 359.4 399 50.4
C09p60230 Brassica napus HOM05D005395 ORTHO05D006352 5.5e-97 359.0 358 52.0
CARHR196310 Cardamine hirsuta HOM05D005395 ORTHO05D006352 5.5e-97 359.0 360 51.7
vmacro13663 Vaccinium macrocarpon HOM05D005395 ORTHO05D006352 5.5e-97 359.0 298 60.7
MBI03_g07304_MAGBIO Magnolia biondii HOM05D005395 ORTHO05D006352 1.2e-96 357.8 382 50.5
Carub.0006s1507 Capsella rubella HOM05D005395 ORTHO05D006352 1.6e-96 357.5 357 51.3
Aa31sc160G20 Aethionema arabicum HOM05D005395 ORTHO05D006352 2.7e-96 356.7 357 51.0
Thhalv10012498m.g Eutrema salsugineum HOM05D005395 ORTHO05D006352 1.8e-95 354.0 360 52.2
AT5G16850 Arabidopsis thaliana HOM05D005395 ORTHO05D006352 2.3e-95 353.6 358 52.2
A10p22380 Brassica napus HOM05D005395 ORTHO05D006352 2.3e-95 353.6 358 51.1
BraA10t44297Z Brassica rapa HOM05D005395 ORTHO05D006352 8.7e-95 351.7 358 51.1
PSO339G2846 Papaver somniferum HOM05D005395 ORTHO05D006352 1.6e-93 347.4 378 50.5
arahy.Tifrunner.gnm1.ann1.LX21RY Arachis hypogaea HOM05D005395 ORTHO05D006352 2.8e-93 346.7 383 52.0
Migut.B01303 Erythranthe guttata HOM05D005395 ORTHO05D006352 5.3e-92 342.4 370 49.7
Migut.B01025 Erythranthe guttata HOM05D005395 ORTHO05D006352 6.9e-92 342.0 370 49.5
ECA234G1269 Erigeron canadensis HOM05D005395 ORTHO05D000002 3.5e-88 329.7 316 54.4
Manes.10G091300 Manihot esculenta HOM05D005395 ORTHO05D006352 8.2e-85 318.5 283 56.9
BcaC04g18841 Brassica carinata HOM05D005395 ORTHO05D006352 3.2e-81 306.6 359 46.8
Actinidia24666 Actinidia chinensis HOM05D005395 ORTHO05D006352 4.3e-78 296.2 363 47.4
AUR62014136 Chenopodium quinoa HOM05D005395 ORTHO05D006352 2.2e-74 283.9 252 54.8
HPP92_011265 Vanilla planifolia HOM05D005395 ORTHO05D006352 1.1e-73 281.6 288 53.5
Pp3c1_42700 Physcomitrium patens HOM05D005395 ORTHO05D006352 8.2e-61 238.8 374 37.7
Mapoly0009s0015 Marchantia polymorpha HOM05D005395 ORTHO05D006352 4.5e-59 233.0 457 34.1
AagrBONN_evm.TU.Sc2ySwM_344.2351 Anthoceros agrestis HOM05D005395 ORTHO05D006352 1.1e-57 228.4 358 36.6
Thecc.10G136000 Theobroma cacao HOM05D005395 ORTHO05D006352 5.5e-57 226.1 206 54.9
Nitab4.5_0002179g0010 Nicotiana tabacum HOM05D005395 ORTHO05D006352 6.7e-55 219.2 184 60.3
SEGI_22370 Sequoiadendron giganteum HOM05D005395 ORTHO05D006352 5.9e-51 206.1 352 36.9
SEGI_30633 Sequoiadendron giganteum HOM05D005395 ORTHO05D006352 5.9e-51 206.1 352 36.9
Lsat_1_v5_gn_4_31580 Lactuca sativa HOM05D005395 ORTHO05D006352 1.8e-47 194.5 362 37.3
Sc04g0005700 Simmondsia chinensis HOM05D005395 ORTHO05D006352 8.3e-45 185.7 215 48.4
MCO03G604 Micromonas commoda HOM05D005395 ORTHO05D006352 5.0e-34 149.8 400 28.8
CBR_g45710 Chara braunii HOM05D005395 ORTHO05D006352 1.3e-26 125.2 185 41.1
Hma1.2p1_0293F.1_g116180 Hydrangea macrophylla HOM05D005395 ORTHO05D006352 8.0e-24 115.9 102 56.9
Lalb_Chr13g0291131 Lupinus albus HOM05D005395 ORTHO05D006352 1.4e-23 115.2 123 47.2
Cre04.g213652 Chlamydomonas reinhardtii HOM05D005395 ORTHO05D006352 4.0e-23 113.6 182 39.0
Dinv12038 Davidia involucrata HOM05D005395 ORTHO05D006352 5.8e-22 109.8 100 54.0
Cpa.g.sc245.13 Carica papaya HOM05D005395 ORTHO05D006352 7.0e-20 102.8 125 44.8
CAN.G1820.3 Capsicum annuum HOM05D005395 ORTHO05D006352 1.3e-18 98.6 99 45.5
BcaC04g18840 Brassica carinata HOM05D005395 ORTHO05D006352 9.5e-17 92.4 102 46.1
CDE07G0235 Ceratophyllum demersum HOM05D005395 ORTHO05D006352 4.7e-16 90.1 109 41.3
CsaV3_3G032200 Cucumis sativus L. HOM05D005395 ORTHO05D006352 1.1e-15 89.0 96 46.9
CSS0040942 Camellia sinensis var. sinensis HOM05D005395 ORTHO05D006352 2.0e-14 84.7 82 54.9
Lj7P570T32 Lonicera japonica HOM05D005395 ORTHO05D006352 7.5e-14 82.8 104 43.3
Aa31sc690G30 Aethionema arabicum HOM05D005395 ORTHO05D006352 9.9e-14 82.4 94 43.6
CSS0036458 Camellia sinensis var. sinensis HOM05D005395 ORTHO05D006352 4.1e-12 77.0 82 53.7
Atru.chr11.730 Acer truncatum HOM05D005395 ORTHO05D006352 7.1e-12 76.3 95 40.0
CSS0041236 Camellia sinensis var. sinensis HOM05D005395 ORTHO05D006352 1.6e-11 75.1 82 52.4
ATR0829G203 Amborella trichopoda HOM05D005395 ORTHO05D006352 4.6e-11 73.6 111 36.0
Cfa026815 Carpinus fangiana HOM05D005395 ORTHO05D006352 1.0e-10 72.4 229 24.5
CDE07G0311 Ceratophyllum demersum HOM05D005395 ORTHO05D006352 3.3e-09 67.4 70 47.1
CSS0042886 Camellia sinensis var. sinensis HOM05D005395 ORTHO05D006352 4.3e-09 67.0 82 46.3
Dinv18440 Davidia involucrata HOM05D005395 ORTHO05D006352 1.4e-07 62.0 48 64.6
PSO384G2197 Papaver somniferum HOM05D005395 ORTHO05D006352 1.4e-07 62.0 65 47.7
SHI19146 Sapria himalayana HOM05D005395 ORTHO05D002065 3.1e-07 60.8 95 36.8


User provided reference genes

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