Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G30892 Trifolium pratense HOM05D008081 ORTHO05D010223 1.9e-118 429.1 200 100.0
Psat1g025520 Pisum sativum HOM05D008081 ORTHO05D010223 4.2e-94 348.2 204 81.4
Medtr2g055250 Medicago truncatula HOM05D008081 ORTHO05D010223 1.3e-92 343.2 207 81.2
Ca_02616_v3 Cicer arietinum L. HOM05D008081 ORTHO05D010223 2.8e-90 335.5 204 80.9
Lj1g0011101 Lotus japonicus HOM05D008081 ORTHO05D010223 2.3e-84 315.8 213 73.2
Glyma.04G150400 Glycine max HOM05D008081 ORTHO05D010223 2.8e-82 308.9 207 72.0
Phvul.009G199400 Phaseolus vulgaris HOM05D008081 ORTHO05D010223 2.8e-82 308.9 207 72.9
Glyma.06G213000 Glycine max HOM05D008081 ORTHO05D010223 2.4e-81 305.8 209 70.3
VMungo1309G1591 Vigna mungo HOM05D008081 ORTHO05D010223 1.9e-78 296.2 211 70.6
Lalb_Chr01g0020971 Lupinus albus HOM05D008081 ORTHO05D010223 2.5e-78 295.8 206 69.4
CANSAT56G1336 Cannabis sativa HOM05D008081 ORTHO05D010223 1.4e-65 253.4 208 57.7
Hma1.2p1_0018F.1_g012950 Hydrangea macrophylla HOM05D008081 ORTHO05D010223 2.6e-59 232.6 208 53.4
ECA234G2703 Erigeron canadensis HOM05D008081 ORTHO05D010223 4.4e-59 231.9 212 51.9
CSS0001106 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 3.7e-58 228.8 208 53.4
CSS0031360 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 8.2e-58 227.6 208 53.4
DCAR_009223 Daucus carota HOM05D008081 ORTHO05D010223 1.4e-57 226.9 210 53.8
Manes.14G127800 Manihot esculenta HOM05D008081 ORTHO05D010223 2.4e-57 226.1 208 53.4
CSS0008637 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 7.0e-57 224.6 208 52.4
HanXRQChr10g0316871 Helianthus annuus HOM05D008081 ORTHO05D010223 5.0e-55 218.4 213 50.2
Aqoxy7G01970 Aquilegia oxysepala HOM05D008081 ORTHO05D010223 1.5e-54 216.9 206 52.9
COL.COLO4_34977 Corchorus olitorius HOM05D008081 ORTHO05D010223 4.2e-54 215.3 205 50.7
Peaxi162Scf00292g00051 Petunia axillaris HOM05D008081 ORTHO05D010223 7.2e-54 214.5 203 50.7
Cc06_g09100 Coffea canephora HOM05D008081 ORTHO05D010223 9.4e-54 214.2 213 49.3
QL02p086958 Quercus lobata HOM05D008081 ORTHO05D010223 1.0e-52 210.7 203 50.2
Cpa.g.sc75.87 Carica papaya HOM05D008081 ORTHO05D010223 1.4e-52 210.3 208 52.9
Lsat_1_v5_gn_5_98420 Lactuca sativa HOM05D008081 ORTHO05D010223 1.5e-51 206.8 209 47.8
Eucgr.L02382 Eucalyptus grandis HOM05D008081 ORTHO05D010223 4.4e-51 205.3 208 50.5
Nitab4.5_0000282g0020 Nicotiana tabacum HOM05D008081 ORTHO05D010223 4.4e-51 205.3 203 48.8
PGR142G1327 Punica granatum HOM05D008081 ORTHO05D010223 4.4e-51 205.3 205 48.8
MBI04_g33811_MAGBIO Magnolia biondii HOM05D008081 ORTHO05D010223 7.5e-51 204.5 205 51.7
Nn2g11886 Nelumbo nucifera HOM05D008081 ORTHO05D010223 4.8e-50 201.8 206 50.0
Eucgr.C01103 Eucalyptus grandis HOM05D008081 ORTHO05D010223 8.3e-50 201.1 208 50.0
Sabra18G0062600 Salix brachista HOM05D008081 ORTHO05D010223 9.1e-49 197.6 212 49.5
Thecc.09G118700 Theobroma cacao HOM05D008081 ORTHO05D010223 1.2e-48 197.2 202 47.0
Solyc08g041700.1 Solanum lycopersicum HOM05D008081 ORTHO05D010223 2.0e-48 196.4 193 49.7
Sopen08g011800 Solanum pennellii HOM05D008081 ORTHO05D010223 2.7e-48 196.1 193 49.7
Potri.018G071900 Populus trichocarpa HOM05D008081 ORTHO05D010223 4.5e-48 195.3 217 49.3
Duzib168G0460 Durio zibethinus HOM05D008081 ORTHO05D010223 1.0e-47 194.1 200 45.0
Gohir.D06G057200 Gossypium hirsutum HOM05D008081 ORTHO05D010223 2.3e-47 193.0 199 47.2
Ciclev10008639m.g Citrus clementina HOM05D008081 ORTHO05D010223 5.0e-47 191.8 210 46.2
Gorai.010G066900 Gossypium raimondii HOM05D008081 ORTHO05D010223 3.3e-46 189.1 199 46.7
TWI34G1060 Tripterygium wilfordii HOM05D008081 ORTHO05D010223 7.2e-46 188.0 204 43.6
TAR383G0366 Trochodendron aralioides HOM05D008081 ORTHO05D010223 7.2e-46 188.0 197 49.7
Atru.chr7.1264 Acer truncatum HOM05D008081 ORTHO05D010223 9.5e-46 187.6 217 43.3
Gohir.A06G059000 Gossypium hirsutum HOM05D008081 ORTHO05D010223 2.8e-45 186.0 199 46.7
PSO765G0202 Papaver somniferum HOM05D008081 ORTHO05D010223 3.0e-44 182.6 203 45.3
PGSC0003DMG400015624 Solanum tuberosum HOM05D008081 ORTHO05D010223 3.0e-44 182.6 188 48.9
PSO349G0241 Papaver somniferum HOM05D008081 ORTHO05D010223 1.5e-43 180.3 205 45.9
Aa31LG4G11630 Aethionema arabicum HOM05D008081 ORTHO05D010223 7.0e-41 171.4 207 40.6
AT5G19970 Arabidopsis thaliana HOM05D008081 ORTHO05D010223 6.6e-39 164.9 205 39.0
AL6G31500 Arabidopsis lyrata HOM05D008081 ORTHO05D010223 1.5e-38 163.7 206 39.8
BcaB05g22890 Brassica carinata HOM05D008081 ORTHO05D010223 1.5e-38 163.7 203 39.4
Sp6g24410 Schrenkiella parvula HOM05D008081 ORTHO05D010223 4.3e-38 162.2 205 39.5
CARHR192880 Cardamine hirsuta HOM05D008081 ORTHO05D010223 5.6e-38 161.8 208 38.0
BNapus_Darmor_BZH_scaffold_38p01920 Brassica napus HOM05D008081 ORTHO05D010223 7.3e-38 161.4 205 39.5
BolC2t06998H Brassica oleracea HOM05D008081 ORTHO05D010223 7.3e-38 161.4 205 39.5
GSVIVG01015465001 Vitis vinifera HOM05D008081 ORTHO05D010223 9.5e-38 161.0 203 43.3
A02p05940 Brassica napus HOM05D008081 ORTHO05D010223 1.2e-37 160.6 203 38.4
BraA02t05546Z Brassica rapa HOM05D008081 ORTHO05D010223 1.2e-37 160.6 203 38.4
Thhalv10013658m.g Eutrema salsugineum HOM05D008081 ORTHO05D010223 1.2e-37 160.6 205 38.0
Thhalv10013905m.g Eutrema salsugineum HOM05D008081 ORTHO05D010223 2.1e-37 159.8 205 37.6
Nitab4.5_0003085g0020 Nicotiana tabacum HOM05D008081 ORTHO05D010223 2.8e-37 159.5 166 45.8
CSS0020794 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 2.3e-36 156.4 160 47.5
Carub.0006s1834 Capsella rubella HOM05D008081 ORTHO05D010223 1.5e-35 153.7 206 38.3
Oeu032197.1 Olea europaea HOM05D008081 ORTHO05D010223 1.8e-33 146.7 204 38.7
Os01g0647000 Oryza sativa ssp. japonica HOM05D008081 ORTHO05D010223 4.6e-32 142.1 201 41.3
ATR0083G076 Amborella trichopoda HOM05D008081 ORTHO05D010223 3.9e-31 139.0 176 42.6
Zm00001eb158500 Zea mays HOM05D008081 ORTHO05D010223 8.6e-31 137.9 211 37.9
THA.LOC104815107 Tarenaya hassleriana HOM05D008081 ORTHO05D010223 1.1e-30 137.5 209 34.9
BcaC03g13723 Brassica carinata HOM05D008081 ORTHO05D010223 1.6e-29 133.7 145 42.1
Actinidia09389 Actinidia chinensis HOM05D008081 ORTHO05D010223 2.0e-27 126.7 208 37.0
Dinv36582 Davidia involucrata HOM05D008081 ORTHO05D010223 1.9e-17 93.6 123 46.3


User provided reference genes

Program Settings