Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G30764 Trifolium pratense HOM05D002237 ORTHO05D002213 2.2e-91 339.0 174 100.0
TPR.G28379 Trifolium pratense HOM05D002237 ORTHO05D002213 2.5e-87 325.5 174 96.6
Medtr2g039320 Medicago truncatula HOM05D002237 ORTHO05D002213 1.7e-51 206.5 179 67.0
Psat1g140840 Pisum sativum HOM05D002237 ORTHO05D002213 6.3e-38 161.4 172 55.8
Ca_02160_v3 Cicer arietinum L. HOM05D002237 ORTHO05D002213 4.1e-29 132.1 176 51.7
Lj6g0012536 Lotus japonicus HOM05D002237 ORTHO05D002213 1.0e-24 117.5 178 44.4
Glyma.15G170100 Glycine max HOM05D002237 ORTHO05D002213 2.0e-15 86.7 175 41.7
VMungo1309G0962 Vigna mungo HOM05D002237 ORTHO05D002213 4.4e-15 85.5 225 34.2
Glyma.09G063300 Glycine max HOM05D002237 ORTHO05D002213 1.8e-13 80.1 232 31.9
CiPaw.04G149200 Carya illinoinensis HOM05D002237 ORTHO05D002213 1.9e-10 70.1 193 32.6
Lalb_Chr08g0232161 Lupinus albus HOM05D002237 ORTHO05D002213 7.3e-10 68.2 97 47.4
CiPaw.03G215600 Carya illinoinensis HOM05D002237 ORTHO05D002213 2.8e-09 66.2 180 35.6
PSO210G0663 Papaver somniferum HOM05D002237 ORTHO05D002213 6.2e-09 65.1 189 32.8
PSO210G3168 Papaver somniferum HOM05D002237 ORTHO05D002213 1.4e-08 63.9 192 31.8
PSO210G1183 Papaver somniferum HOM05D002237 ORTHO05D002213 3.1e-08 62.8 189 32.8
Hma1.2p1_0163F.1_g073030 Hydrangea macrophylla HOM05D002237 ORTHO05D002213 5.2e-08 62.0 37 81.1
Hma1.2p1_2410F.1_g321555 Hydrangea macrophylla HOM05D002237 ORTHO05D002213 5.2e-08 62.0 37 81.1
Phvul.009G232000 Phaseolus vulgaris HOM05D002237 ORTHO05D002213 5.2e-08 62.0 151 37.1
TAR626G0565 Trochodendron aralioides HOM05D001162 ORTHO05D001218 5.2e-08 62.0 150 32.0
CiPaw.03G215500 Carya illinoinensis HOM05D002237 ORTHO05D002213 6.8e-08 61.6 131 38.9
CSS0010318 Camellia sinensis var. sinensis HOM05D002237 ORTHO05D002213 8.9e-08 61.2 34 85.3
CiPaw.03G215700 Carya illinoinensis HOM05D002237 ORTHO05D002213 1.2e-07 60.8 182 34.6
HanXRQChr06g0178571 Helianthus annuus HOM05D002237 ORTHO05D002213 1.5e-07 60.5 144 40.3
CSS0026514 Camellia sinensis var. sinensis HOM05D002237 ORTHO05D002213 2.6e-07 59.7 64 53.1
MD15G1207800 Malus domestica HOM05D002237 ORTHO05D002213 2.6e-07 59.7 199 30.2
Hma1.2p1_1051F.1_g252130 Hydrangea macrophylla HOM05D002237 ORTHO05D002213 3.4e-07 59.3 37 75.7
Oeu041234.1 Olea europaea HOM05D002237 ORTHO05D002213 4.4e-07 58.9 161 34.2
Prupe.7G209100 Prunus persica HOM05D002237 ORTHO05D002213 5.8e-07 58.5 102 40.2
TAR636G2243 Trochodendron aralioides HOM05D002237 ORTHO05D002213 5.8e-07 58.5 69 47.8
Manes.16G101500 Manihot esculenta HOM05D002237 ORTHO05D002213 7.5e-07 58.2 185 34.6
Migut.A00134 Erythranthe guttata HOM05D002237 ORTHO05D002213 9.8e-07 57.8 36 72.2
Rhsim05G0020400 Rhododendron simsii HOM05D002237 ORTHO05D002213 9.8e-07 57.8 35 77.1
Cfa003084 Carpinus fangiana HOM05D002237 ORTHO05D002213 1.3e-06 57.4 69 55.1
Migut.J00621 Erythranthe guttata HOM05D002237 ORTHO05D002213 1.3e-06 57.4 33 78.8
FvH4_1g07560 Fragaria vesca HOM05D002237 ORTHO05D002213 1.7e-06 57.0 37 70.3
FAN19G3195 Fragaria x ananassa HOM05D002237 ORTHO05D002213 1.7e-06 57.0 37 70.3
FAN26G0211 Fragaria x ananassa HOM05D002237 ORTHO05D002213 1.7e-06 57.0 37 70.3
FAN26G2487 Fragaria x ananassa HOM05D002237 ORTHO05D002213 1.7e-06 57.0 37 70.3
Prupe.1G411600 Prunus persica HOM05D002237 ORTHO05D002213 1.7e-06 57.0 87 42.5
Actinidia25249 Actinidia chinensis HOM05D002237 ORTHO05D002213 2.2e-06 56.6 37 73.0
FAN20G2042 Fragaria x ananassa HOM05D002237 ORTHO05D002213 2.2e-06 56.6 67 46.3
FAN27G2230 Fragaria x ananassa HOM05D002237 ORTHO05D002213 2.2e-06 56.6 67 46.3
MBI04_g31169_MAGBIO Magnolia biondii HOM05D002237 ORTHO05D002213 2.9e-06 56.2 59 54.2
PGR031G2556 Punica granatum HOM05D002237 ORTHO05D002213 2.9e-06 56.2 34 73.5
TAR624G1451 Trochodendron aralioides HOM05D002237 ORTHO05D002213 2.9e-06 56.2 84 42.9
CANSAT25G0876 Cannabis sativa HOM05D002237 ORTHO05D002213 3.7e-06 55.8 64 50.0
AUR62033958 Chenopodium quinoa HOM05D029282 ORTHO05D002213 3.7e-06 55.8 54 55.6
Dinv36772 Davidia involucrata HOM05D002237 ORTHO05D002213 3.7e-06 55.8 97 39.2
FvH4_2g31830 Fragaria vesca HOM05D002237 ORTHO05D002213 3.7e-06 55.8 67 44.8
FAN24G2308 Fragaria x ananassa HOM05D002237 ORTHO05D002213 3.7e-06 55.8 67 44.8
MBI04_g31172_MAGBIO Magnolia biondii HOM05D002237 ORTHO05D002213 3.7e-06 55.8 81 42.0
PSO063G0636 Papaver somniferum HOM05D002237 ORTHO05D002213 3.7e-06 55.8 37 70.3
Rhsim11G0044000 Rhododendron simsii HOM05D002237 ORTHO05D002213 3.7e-06 55.8 37 64.9
SEGI_05314 Sequoiadendron giganteum HOM05D002237 ORTHO05D002213 3.7e-06 55.8 110 39.1
Thecc.09G054200 Theobroma cacao HOM05D002237 ORTHO05D002213 3.7e-06 55.8 75 45.3
Haze_25915 Corylus avellana HOM05D002237 ORTHO05D002213 4.9e-06 55.5 80 47.5
DCAR_030907 Daucus carota HOM05D002237 ORTHO05D002213 4.9e-06 55.5 128 37.5
Migut.E01567 Erythranthe guttata HOM05D002237 ORTHO05D002213 4.9e-06 55.5 36 66.7
Eucgr.C00886 Eucalyptus grandis HOM05D002237 ORTHO05D002213 4.9e-06 55.5 176 34.1
Hma1.2p1_0482F.1_g162400 Hydrangea macrophylla HOM05D002237 ORTHO05D002213 4.9e-06 55.5 37 64.9
Lj7A676T37 Lonicera japonica HOM05D002237 ORTHO05D002213 4.9e-06 55.5 87 41.4
PGR142G4283 Punica granatum HOM05D002237 ORTHO05D002213 4.9e-06 55.5 50 56.0
Cfa009978 Carpinus fangiana HOM05D002237 ORTHO05D002213 6.4e-06 55.1 36 69.4
Cfa018473 Carpinus fangiana HOM05D002237 ORTHO05D002213 6.4e-06 55.1 36 69.4
Ciclev10008860m.g Citrus clementina HOM05D002237 ORTHO05D002213 6.4e-06 55.1 106 34.0
FAN15G1416 Fragaria x ananassa HOM05D002237 ORTHO05D002213 6.4e-06 55.1 64 46.9
FAN28G1161 Fragaria x ananassa HOM05D002237 ORTHO05D002213 6.4e-06 55.1 39 66.7
Lj7P270T5 Lonicera japonica HOM05D002237 ORTHO05D002213 6.4e-06 55.1 36 63.9
SalBow6G1974 Salvia bowleyana HOM05D002237 ORTHO05D002213 6.4e-06 55.1 88 37.5
Sed0011201 Sechium edule HOM05D002237 ORTHO05D002213 6.4e-06 55.1 35 71.4
Sed0018033 Sechium edule HOM05D002237 ORTHO05D002213 6.4e-06 55.1 67 44.8
SGA_v2.0_scaffold62G21613 Striga asiatica HOM05D002237 ORTHO05D002213 6.4e-06 55.1 74 40.5
COL.COLO4_21062 Corchorus olitorius HOM05D002237 ORTHO05D002213 8.3e-06 54.7 83 41.0
MD08G1062500 Malus domestica HOM05D002237 ORTHO05D002213 8.3e-06 54.7 64 48.4
Oeu016763.1 Olea europaea HOM05D002237 ORTHO05D002213 8.3e-06 54.7 60 51.7
SEGI_14039 Sequoiadendron giganteum HOM05D002237 ORTHO05D002213 8.3e-06 54.7 110 39.1
Sopen05g016140 Solanum pennellii HOM05D002237 ORTHO05D002213 8.3e-06 54.7 121 33.9


User provided reference genes

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