Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G30758 Trifolium pratense HOM05D000694 ORTHO05D410614 5.2e-32 141.0 103 100.0
Medtr6g070920 Medicago truncatula HOM05D000694 ORTHO05D000530 9.5e-26 120.2 64 92.2
Psat1g029680 Pisum sativum HOM05D000694 ORTHO05D000530 3.4e-23 111.7 64 85.9
Lalb_Chr24g0398131 Lupinus albus HOM05D000694 ORTHO05D000530 1.9e-18 95.9 64 71.9
Glyma.09G173400 Glycine max HOM05D000694 ORTHO05D000530 2.1e-17 92.4 59 78.0
Glyma.07G104200 Glycine max HOM05D000694 ORTHO05D000530 2.8e-17 92.0 59 76.3
Phvul.004G148500 Phaseolus vulgaris HOM05D000694 ORTHO05D000530 3.6e-17 91.7 59 76.3
VMungo0464G0887 Vigna mungo HOM05D000694 ORTHO05D000530 3.6e-17 91.7 59 76.3
Lj2g0001913 Lotus japonicus HOM05D000694 ORTHO05D000530 5.3e-16 87.8 60 73.3
arahy.Tifrunner.gnm1.ann1.85GS0V Arachis hypogaea HOM05D000694 ORTHO05D000530 2.0e-15 85.9 61 73.8
arahy.Tifrunner.gnm1.ann1.8HR44I Arachis hypogaea HOM05D000694 ORTHO05D000530 2.0e-15 85.9 61 73.8
Lalb_Chr14g0370681 Lupinus albus HOM05D000694 ORTHO05D000530 7.6e-15 84.0 64 68.8
Lalb_Chr22g0353461 Lupinus albus HOM05D000694 ORTHO05D000530 4.9e-14 81.3 58 70.7
Lalb_Chr16g0386921 Lupinus albus HOM05D000694 ORTHO05D000530 1.0e-11 73.6 59 62.7
Glyma.08G055800 Glycine max HOM05D000694 ORTHO05D000530 1.1e-10 70.1 60 65.0
FAN08G2190 Fragaria x ananassa HOM05D000694 ORTHO05D000530 1.5e-10 69.7 59 69.5
FAN13G2281 Fragaria x ananassa HOM05D000694 ORTHO05D000530 1.5e-10 69.7 59 69.5
RcHm_v2.0_Chr7g0178041 Rosa chinensis HOM05D000694 ORTHO05D000530 3.3e-10 68.6 59 66.1
FvH4_5g17620 Fragaria vesca HOM05D000694 ORTHO05D000530 4.3e-10 68.2 59 67.8
FAN18G2973 Fragaria x ananassa HOM05D000694 ORTHO05D000530 4.3e-10 68.2 59 67.8
Lalb_Chr05g0221541 Lupinus albus HOM05D000694 ORTHO05D000530 5.6e-10 67.8 59 61.0
Psat7g000880 Pisum sativum HOM05D000694 ORTHO05D000530 9.6e-10 67.0 60 56.7
Medtr8g107500 Medicago truncatula HOM05D000694 ORTHO05D267572 8.1e-09 63.9 62 59.7
Prupe.5G235900 Prunus persica HOM05D000694 ORTHO05D000530 1.2e-07 60.1 59 57.6
PGR044G1917 Punica granatum HOM05D000694 ORTHO05D000530 3.4e-07 58.5 59 57.6
Ca_25354_v3 Cicer arietinum L. HOM05D000694 ORTHO05D000530 1.3e-06 56.6 25 96.0
MD14G1238600 Malus domestica HOM05D000694 ORTHO05D000530 1.7e-06 56.2 62 54.8
MD06G1232000 Malus domestica HOM05D000694 ORTHO05D000530 2.2e-06 55.8 62 54.8


User provided reference genes

Program Settings