Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G30538 Trifolium pratense HOM05D006148 ORTHO05D007955 1.0e-83 313.5 175 100.0
Medtr3g086600 Medicago truncatula HOM05D006148 ORTHO05D007955 5.5e-66 254.6 163 85.3
Psat5g091640 Pisum sativum HOM05D006148 ORTHO05D007955 3.3e-63 245.4 163 82.2
Ca_20510_v3 Cicer arietinum L. HOM05D006148 ORTHO05D007955 8.8e-56 220.7 167 77.8
Glyma.16G092500 Glycine max HOM05D006148 ORTHO05D007955 7.2e-50 201.1 146 75.3
Phvul.010G018500 Phaseolus vulgaris HOM05D006148 ORTHO05D007955 2.7e-49 199.1 194 61.9
Lalb_Chr15g0078661 Lupinus albus HOM05D006148 ORTHO05D007955 2.0e-47 193.0 160 68.1
VMungo0331G0425 Vigna mungo HOM05D006148 ORTHO05D007955 2.0e-47 193.0 146 74.7
Lalb_Chr18g0047251 Lupinus albus HOM05D006148 ORTHO05D007955 5.7e-47 191.4 179 63.1
Lj3g0001636 Lotus japonicus HOM05D006148 ORTHO05D007955 4.1e-45 185.3 139 75.5
Glyma.09G078400 Glycine max HOM05D006148 ORTHO05D007955 2.0e-44 183.0 146 71.9
Manes.02G044300 Manihot esculenta HOM05D006148 ORTHO05D007955 6.6e-43 177.9 145 66.2
CANSAT21G1845 Cannabis sativa HOM05D006148 ORTHO05D007955 1.1e-42 177.2 145 65.5
Hma1.2p1_0840F.1_g226570 Hydrangea macrophylla HOM05D006148 ORTHO05D007955 5.6e-42 174.9 160 60.0
arahy.Tifrunner.gnm1.ann1.L2DS42 Arachis hypogaea HOM05D006148 ORTHO05D007955 7.2e-42 174.5 168 58.9
arahy.Tifrunner.gnm1.ann1.0GR2GF Arachis hypogaea HOM05D006148 ORTHO05D007955 1.2e-41 173.7 168 58.9
Oeu017209.1 Olea europaea HOM05D006148 ORTHO05D007955 1.2e-41 173.7 149 65.1
CSS0033428 Camellia sinensis var. sinensis HOM05D006148 ORTHO05D007955 2.8e-41 172.6 146 65.8
Dinv21692 Davidia involucrata HOM05D006148 ORTHO05D007955 6.1e-41 171.4 144 65.3
Migut.I00620 Erythranthe guttata HOM05D006148 ORTHO05D007955 8.0e-41 171.0 146 65.8
Gohir.D12G216200 Gossypium hirsutum HOM05D006148 ORTHO05D007955 8.0e-41 171.0 143 64.3
Gorai.008G231600 Gossypium raimondii HOM05D006148 ORTHO05D007955 8.0e-41 171.0 143 64.3
Oeu040676.1 Olea europaea HOM05D006148 ORTHO05D007955 1.0e-40 170.6 158 65.2
Cc02_g08620 Coffea canephora HOM05D006148 ORTHO05D007955 1.4e-40 170.2 144 64.6
Gohir.A12G213600 Gossypium hirsutum HOM05D006148 ORTHO05D007955 1.8e-40 169.9 143 63.6
ClCG09G012770 Citrullus lanatus HOM05D006148 ORTHO05D007955 4.0e-40 168.7 141 67.4
CiPaw.12G047200 Carya illinoinensis HOM05D006148 ORTHO05D007955 5.2e-40 168.3 134 66.4
PGR031G0321 Punica granatum HOM05D006148 ORTHO05D007955 8.9e-40 167.5 140 67.1
Sed0014825 Sechium edule HOM05D006148 ORTHO05D007955 8.9e-40 167.5 146 65.8
Duzib068G0643 Durio zibethinus HOM05D006148 ORTHO05D007955 1.5e-39 166.8 145 61.4
MD04G1051900 Malus domestica HOM05D006148 ORTHO05D007955 2.6e-39 166.0 149 61.1
Prupe.5G058400 Prunus persica HOM05D006148 ORTHO05D007955 3.4e-39 165.6 149 61.7
Nitab4.5_0007628g0010 Nicotiana tabacum HOM05D006148 ORTHO05D007955 4.4e-39 165.2 165 57.6
MSTRG.9371 Avicennia marina HOM05D006148 ORTHO05D007955 7.5e-39 164.5 144 63.9
PGSC0003DMG400026577 Solanum tuberosum HOM05D006148 ORTHO05D007955 7.5e-39 164.5 141 61.0
TAR375G0576 Trochodendron aralioides HOM05D006148 ORTHO05D007955 7.5e-39 164.5 145 61.4
Nitab4.5_0003456g0030 Nicotiana tabacum HOM05D006148 ORTHO05D007955 9.8e-39 164.1 144 61.8
Aqoxy7G03487 Aquilegia oxysepala HOM05D006148 ORTHO05D007955 1.3e-38 163.7 146 61.0
Solyc08g077970.2 Solanum lycopersicum HOM05D006148 ORTHO05D007955 1.3e-38 163.7 145 60.0
SGA_v2.0_scaffold377G50308 Striga asiatica HOM05D006148 ORTHO05D007955 1.3e-38 163.7 157 58.6
Thecc.03G242700 Theobroma cacao HOM05D006148 ORTHO05D007955 1.3e-38 163.7 123 70.7
Rhsim07G0118900 Rhododendron simsii HOM05D006148 ORTHO05D007955 1.7e-38 163.3 124 68.5
PGSC0003DMG400026249 Solanum tuberosum HOM05D006148 ORTHO05D007955 1.7e-38 163.3 144 59.7
SGA_v2.0_scaffold40G15681 Striga asiatica HOM05D006148 ORTHO05D007955 1.7e-38 163.3 137 65.0
unitig_46.g17987 Utricularia gibba HOM05D006148 ORTHO05D007955 2.2e-38 162.9 131 64.9
vmacro14126 Vaccinium macrocarpon HOM05D006148 ORTHO05D007955 2.2e-38 162.9 124 68.5
Sopen08g026480 Solanum pennellii HOM05D006148 ORTHO05D007955 3.7e-38 162.2 145 60.0
Solyc06g060920.3 Solanum lycopersicum HOM05D006148 ORTHO05D007955 6.4e-38 161.4 145 59.3
Sopen06g021070 Solanum pennellii HOM05D006148 ORTHO05D007955 6.4e-38 161.4 145 59.3
Atru.chr9.1220 Acer truncatum HOM05D006148 ORTHO05D007955 8.3e-38 161.0 149 59.1
Eucgr.D02128 Eucalyptus grandis HOM05D006148 ORTHO05D007955 8.3e-38 161.0 126 68.3
CsaV3_3G049830 Cucumis sativus L. HOM05D006148 ORTHO05D007955 1.1e-37 160.6 147 63.3
MD06G1048200 Malus domestica HOM05D006148 ORTHO05D007955 1.1e-37 160.6 149 59.7
Nitab4.5_0000506g0080 Nicotiana tabacum HOM05D006148 ORTHO05D007955 1.8e-37 159.8 144 60.4
RcHm_v2.0_Chr7g0205301 Rosa chinensis HOM05D006148 ORTHO05D007955 2.4e-37 159.5 141 63.1
Sed0021147 Sechium edule HOM05D006148 ORTHO05D007955 2.4e-37 159.5 146 61.6
Peaxi162Scf00190g00088 Petunia axillaris HOM05D006148 ORTHO05D007955 3.2e-37 159.1 144 60.4
TWI15G0129 Tripterygium wilfordii HOM05D006148 ORTHO05D007955 3.2e-37 159.1 146 59.6
CAN.G761.17 Capsicum annuum HOM05D006148 ORTHO05D007955 4.1e-37 158.7 144 58.3
Ciclev10022620m.g Citrus clementina HOM05D006148 ORTHO05D007955 1.2e-36 157.1 144 61.1
MELO3C003333.2 Cucumis melo HOM05D006148 ORTHO05D007955 1.6e-36 156.8 124 68.5
unitig_747.g21320 Utricularia gibba HOM05D006148 ORTHO05D007955 1.6e-36 156.8 131 61.8
Actinidia10861 Actinidia chinensis HOM05D006148 ORTHO05D007955 2.0e-36 156.4 144 60.4
DCAR_005581 Daucus carota HOM05D006148 ORTHO05D007955 5.9e-36 154.8 140 59.3
MBI15_g47175_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 5.9e-36 154.8 141 61.0
THA.LOC104814463 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 5.9e-36 154.8 126 65.1
FvH4_5g20230 Fragaria vesca HOM05D006148 ORTHO05D007955 1.0e-35 154.1 141 61.7
Aa31LG2G13090 Aethionema arabicum HOM05D006148 ORTHO05D007955 1.7e-35 153.3 148 56.1
COL.COLO4_07508 Corchorus olitorius HOM05D006148 ORTHO05D007955 1.7e-35 153.3 143 58.0
PSO541G2943 Papaver somniferum HOM05D006148 ORTHO05D007955 1.7e-35 153.3 120 63.3
Carub.0007s2441 Capsella rubella HOM05D006148 ORTHO05D007955 2.3e-35 152.9 146 56.2
FAN13G2154 Fragaria x ananassa HOM05D006148 ORTHO05D007955 2.9e-35 152.5 141 61.0
FAN13G3051 Fragaria x ananassa HOM05D006148 ORTHO05D007955 2.9e-35 152.5 141 61.0
Potri.012G038600 Populus trichocarpa HOM05D006148 ORTHO05D007955 2.9e-35 152.5 131 60.3
Lj2A228G47 Lonicera japonica HOM05D006148 ORTHO05D007955 3.9e-35 152.1 112 68.8
Rhsim07G0118700 Rhododendron simsii HOM05D006148 ORTHO05D007955 3.9e-35 152.1 143 59.4
CSS0030063 Camellia sinensis var. sinensis HOM05D006148 ORTHO05D007955 6.6e-35 151.4 144 57.6
SalBow1G4160 Salvia bowleyana HOM05D006148 ORTHO05D007955 8.6e-35 151.0 123 63.4
THA.LOC104807925 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 8.6e-35 151.0 126 64.3
THA.LOC104812735 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 8.6e-35 151.0 144 60.4
Lsat_1_v5_gn_3_16181 Lactuca sativa HOM05D006148 ORTHO05D007955 4.3e-34 148.7 153 52.9
Sc22g0005540 Simmondsia chinensis HOM05D006148 ORTHO05D007955 1.2e-33 147.1 144 59.0
CDE04G1348 Ceratophyllum demersum HOM05D006148 ORTHO05D007955 2.1e-33 146.4 149 53.7
ECA248G1075 Erigeron canadensis HOM05D006148 ORTHO05D007955 3.6e-33 145.6 155 52.3
BcaNung00135 Brassica carinata HOM05D006148 ORTHO05D007955 8.0e-33 144.4 164 52.4
PSO675G9254 Papaver somniferum HOM05D006148 ORTHO05D007955 8.0e-33 144.4 120 61.7
BcaC09g50434 Brassica carinata HOM05D006148 ORTHO05D007955 1.0e-32 144.1 164 51.8
C01p25460 Brassica napus HOM05D006148 ORTHO05D007955 1.0e-32 144.1 164 51.2
BraA01t01958Z Brassica rapa HOM05D006148 ORTHO05D007955 1.0e-32 144.1 164 51.8
BolC1t02497H Brassica oleracea HOM05D006148 ORTHO05D007955 1.8e-32 143.3 164 51.8
DCAR_008334 Daucus carota HOM05D006148 ORTHO05D007955 1.8e-32 143.3 139 57.6
A01p20300 Brassica napus HOM05D006148 ORTHO05D007955 2.3e-32 142.9 164 51.2
Lj3A721T48 Lonicera japonica HOM05D006148 ORTHO05D007955 3.1e-32 142.5 134 58.2
Sabra12G0027000 Salix brachista HOM05D006148 ORTHO05D007955 5.2e-32 141.7 142 53.5
HPP92_005702 Vanilla planifolia HOM05D006148 ORTHO05D007955 5.2e-32 141.7 124 60.5
EL10Ac5g12797 Beta vulgaris HOM05D006148 ORTHO05D007955 6.8e-32 141.4 125 64.0
FAN04G0567 Fragaria x ananassa HOM05D006148 ORTHO05D007955 1.5e-31 140.2 163 52.8
Sp7g17180 Schrenkiella parvula HOM05D006148 ORTHO05D007955 2.0e-31 139.8 146 52.7
AT4G17010 Arabidopsis thaliana HOM05D006148 ORTHO05D007955 2.6e-31 139.4 157 51.6
FAN08G3523 Fragaria x ananassa HOM05D006148 ORTHO05D007955 5.8e-31 138.3 172 50.6
HanXRQChr17g0550021 Helianthus annuus HOM05D006148 ORTHO05D007955 5.8e-31 138.3 143 52.4
CARHR223570 Cardamine hirsuta HOM05D006148 ORTHO05D007955 7.5e-31 137.9 139 54.7
Os04g0431800 Oryza sativa ssp. japonica HOM05D006148 ORTHO05D007955 6.4e-30 134.8 161 50.9
Haze_05448 Corylus avellana HOM05D006148 ORTHO05D007955 8.3e-30 134.4 201 44.3
Hund11457 Selenicereus undatus HOM05D006148 ORTHO05D007955 1.1e-29 134.0 123 58.5
Thhalv10026445m.g Eutrema salsugineum HOM05D006148 ORTHO05D007955 3.2e-29 132.5 126 57.9
AUR62017180 Chenopodium quinoa HOM05D006148 ORTHO05D007955 4.1e-29 132.1 134 55.2
Os02g0494600 Oryza sativa ssp. japonica HOM05D006148 ORTHO05D007955 5.4e-29 131.7 174 44.8
AL7G37710 Arabidopsis lyrata HOM05D006148 ORTHO05D007955 2.0e-28 129.8 156 48.7
Hma1.2p1_1008F.1_g247180 Hydrangea macrophylla HOM05D006148 ORTHO05D007955 2.0e-28 129.8 113 61.9
QL12p009037 Quercus lobata HOM05D006148 ORTHO05D007955 2.5e-26 122.9 76 85.5
ATR0767G234 Amborella trichopoda HOM05D006148 ORTHO05D007955 5.6e-26 121.7 165 46.1
Nn1g00796 Nelumbo nucifera HOM05D006148 ORTHO05D007955 1.2e-25 120.6 141 53.9
Zm00001eb422600 Zea mays HOM05D006148 ORTHO05D007955 1.6e-25 120.2 107 56.1
vmacro00048 Vaccinium macrocarpon HOM05D006148 ORTHO05D007955 1.2e-23 114.0 76 76.3
MBI06_g25325_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 6.0e-20 101.7 105 54.3
Lj2A721G5 Lonicera japonica HOM05D006148 ORTHO05D007955 1.6e-17 93.6 73 67.1
Ah.07g196390 Amaranthus hybridus HOM05D006148 ORTHO05D007955 2.2e-14 83.2 117 44.4
Cpa.g.sc1152.2 Carica papaya HOM05D006148 ORTHO05D007955 5.4e-13 78.6 73 61.6
SEGI_12345 Sequoiadendron giganteum HOM05D006148 ORTHO05D007955 2.1e-12 76.6 176 34.7
Nitab4.5_0000500g0150 Nicotiana tabacum HOM05D006148 ORTHO05D007955 6.0e-12 75.1 100 45.0
AUR62010708 Chenopodium quinoa HOM05D006148 ORTHO05D007955 3.0e-11 72.8 125 40.0
AUR62027260 Chenopodium quinoa HOM05D006148 ORTHO05D007955 6.6e-11 71.6 134 37.3
Oeu017208.1 Olea europaea HOM05D002196 ORTHO05D002565 6.8e-08 61.6 73 49.3


User provided reference genes

Program Settings