Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G30510 Trifolium pratense HOM05D000394 ORTHO05D000299 3.4e-74 281.6 143 100.0
Medtr4g070780 Medicago truncatula HOM05D000394 ORTHO05D000299 1.4e-30 136.7 124 62.1
Medtr4g070730 Medicago truncatula HOM05D000394 ORTHO05D000299 7.5e-21 104.4 126 58.7
Lj3g0010552 Lotus japonicus HOM05D000394 ORTHO05D000299 5.1e-09 65.1 67 58.2
Medtr4g070810 Medicago truncatula HOM05D000394 ORTHO05D000299 5.1e-09 65.1 62 64.5
MD05G1062600 Malus domestica HOM05D000394 ORTHO05D000299 1.1e-08 63.9 67 59.7
MD10G1070300 Malus domestica HOM05D000394 ORTHO05D000299 1.1e-08 63.9 67 59.7
Lalb_Chr01g0002351 Lupinus albus HOM05D000394 ORTHO05D000299 1.5e-08 63.5 67 59.7
ClCG11G004200 Citrullus lanatus HOM05D000394 ORTHO05D000299 1.9e-08 63.2 62 64.5
MELO3C023317.2 Cucumis melo HOM05D000394 ORTHO05D000299 1.9e-08 63.2 62 64.5
CsaV3_2G014970 Cucumis sativus L. HOM05D000394 ORTHO05D000299 1.9e-08 63.2 62 64.5
Atru.chr5.3064 Acer truncatum HOM05D000394 ORTHO05D000299 3.3e-08 62.4 62 59.7
Actinidia00543 Actinidia chinensis HOM05D000394 ORTHO05D000299 3.3e-08 62.4 67 59.7
Cfa005044 Carpinus fangiana HOM05D000394 ORTHO05D000299 3.3e-08 62.4 62 61.3
CiPaw.05G067800 Carya illinoinensis HOM05D000394 ORTHO05D000299 3.3e-08 62.4 62 59.7
COL.COLO4_25978 Corchorus olitorius HOM05D000394 ORTHO05D000299 3.3e-08 62.4 62 59.7
Duzib132G0817 Durio zibethinus HOM05D000394 ORTHO05D000299 3.3e-08 62.4 62 59.7
Glyma.11G115000 Glycine max HOM05D000394 ORTHO05D000299 3.3e-08 62.4 62 62.9
Glyma.12G040800 Glycine max HOM05D000394 ORTHO05D000299 3.3e-08 62.4 62 62.9
VMungo1127G2204 Vigna mungo HOM05D000394 ORTHO05D000299 3.3e-08 62.4 62 62.9
Actinidia02228 Actinidia chinensis HOM05D000394 ORTHO05D000299 4.3e-08 62.0 67 59.7
Dinv23493 Davidia involucrata HOM05D000394 ORTHO05D000299 4.3e-08 62.0 62 62.9
Psat7g181920 Pisum sativum HOM05D000394 ORTHO05D000299 4.3e-08 62.0 62 62.9
QL11p044171 Quercus lobata HOM05D000394 ORTHO05D000299 4.3e-08 62.0 62 59.7
GSVIVG01023815001 Vitis vinifera HOM05D000394 ORTHO05D000299 4.3e-08 62.0 62 59.7
Phvul.011G042800 Phaseolus vulgaris HOM05D000394 ORTHO05D000299 5.6e-08 61.6 62 62.9
Prupe.8G091900 Prunus persica HOM05D000394 ORTHO05D000299 5.6e-08 61.6 67 58.2
Sed0000907 Sechium edule HOM05D000394 ORTHO05D000299 5.6e-08 61.6 62 62.9
Eucgr.G01643 Eucalyptus grandis HOM05D000394 ORTHO05D000299 7.3e-08 61.2 62 61.3
FAN15G1930 Fragaria x ananassa HOM05D000394 ORTHO05D000299 7.3e-08 61.2 67 58.2
FAN20G1766 Fragaria x ananassa HOM05D000394 ORTHO05D000299 7.3e-08 61.2 67 58.2
FAN27G3451 Fragaria x ananassa HOM05D000394 ORTHO05D000299 7.3e-08 61.2 67 58.2
Thecc.02G081100 Theobroma cacao HOM05D000394 ORTHO05D000299 7.3e-08 61.2 62 59.7
Ca_15353_v3 Cicer arietinum L. HOM05D000394 ORTHO05D000299 9.5e-08 60.8 67 55.2
FvH4_2g09500 Fragaria vesca HOM05D000394 ORTHO05D000299 9.5e-08 60.8 67 58.2
Lj5A194G76 Lonicera japonica HOM05D000394 ORTHO05D000299 9.5e-08 60.8 62 59.7
Manes.11G084600 Manihot esculenta HOM05D000394 ORTHO05D000299 9.5e-08 60.8 62 59.7
Medtr3g117100 Medicago truncatula HOM05D000394 ORTHO05D000299 9.5e-08 60.8 62 59.7
RcHm_v2.0_Chr6g0265801 Rosa chinensis HOM05D000394 ORTHO05D000299 9.5e-08 60.8 62 61.3
Sabra04G0105500 Salix brachista HOM05D000394 ORTHO05D000299 9.5e-08 60.8 62 59.7
Cpa.g.sc106.9 Carica papaya HOM05D000394 ORTHO05D000299 1.2e-07 60.5 62 59.7
PGR142G2659 Punica granatum HOM05D000394 ORTHO05D000299 1.2e-07 60.5 67 55.2
DCAR_023035 Daucus carota HOM05D000394 ORTHO05D000299 1.6e-07 60.1 62 59.7
Sed0025967 Sechium edule HOM05D000394 ORTHO05D000299 1.6e-07 60.1 62 62.9
CSS0006938 Camellia sinensis var. sinensis HOM05D000394 ORTHO05D000299 2.1e-07 59.7 62 61.3
Duzib248G0318 Durio zibethinus HOM05D000394 ORTHO05D000299 2.1e-07 59.7 62 58.1
FAN24G3504 Fragaria x ananassa HOM05D000394 ORTHO05D000299 2.1e-07 59.7 67 56.7
Manes.04G074000 Manihot esculenta HOM05D000394 ORTHO05D000299 2.1e-07 59.7 67 55.2
Psat0s2495g0080 Pisum sativum HOM05D000394 ORTHO05D000299 2.1e-07 59.7 62 58.1
Sabra09G0092000 Salix brachista HOM05D000394 ORTHO05D000299 2.1e-07 59.7 62 58.1
TWI31G0814 Tripterygium wilfordii HOM05D000394 ORTHO05D000299 2.1e-07 59.7 62 59.7
Lj1g0021148 Lotus japonicus HOM05D000394 ORTHO05D000299 2.8e-07 59.3 67 55.2
Rhsim11G0179600 Rhododendron simsii HOM05D000394 ORTHO05D000299 2.8e-07 59.3 62 61.3
Sc05g0005400 Simmondsia chinensis HOM05D000394 ORTHO05D000299 2.8e-07 59.3 62 56.5
vmacro02082 Vaccinium macrocarpon HOM05D000394 ORTHO05D000299 2.8e-07 59.3 62 61.3
CSS0000502 Camellia sinensis var. sinensis HOM05D000394 ORTHO05D000299 3.6e-07 58.9 62 59.7
Ah.01g019160 Amaranthus hybridus HOM05D000394 ORTHO05D000299 4.7e-07 58.5 67 53.7
Gohir.A03G196400 Gossypium hirsutum HOM05D000394 ORTHO05D000299 4.7e-07 58.5 62 58.1
Hma1.2p1_1910F.1_g307250 Hydrangea macrophylla HOM05D000394 ORTHO05D000299 4.7e-07 58.5 62 59.7
Potri.004G157700 Populus trichocarpa HOM05D000394 ORTHO05D000299 4.7e-07 58.5 62 58.1
PGR042G2761 Punica granatum HOM05D000394 ORTHO05D000299 4.7e-07 58.5 62 58.1
Hund06255 Selenicereus undatus HOM05D000394 ORTHO05D000299 4.7e-07 58.5 62 56.5
TWI79G0371 Tripterygium wilfordii HOM05D000394 ORTHO05D000299 4.7e-07 58.5 62 59.7
Ah.01g006340 Amaranthus hybridus HOM05D000394 ORTHO05D000299 6.2e-07 58.2 67 52.2
EL10Ac9g21695 Beta vulgaris HOM05D000394 ORTHO05D000299 6.2e-07 58.2 67 53.7
AUR62016769 Chenopodium quinoa HOM05D000394 ORTHO05D000299 6.2e-07 58.2 67 53.7
Gohir.D02G217600 Gossypium hirsutum HOM05D000394 ORTHO05D000299 6.2e-07 58.2 62 58.1
Gorai.005G245600 Gossypium raimondii HOM05D000394 ORTHO05D000299 6.2e-07 58.2 62 58.1
Lj9C375G11 Lonicera japonica HOM05D000394 ORTHO05D000299 6.2e-07 58.2 61 57.4
DCAR_001563 Daucus carota HOM05D000394 ORTHO05D000299 8.1e-07 57.8 62 59.7
Gohir.A12G042801 Gossypium hirsutum HOM05D000394 ORTHO05D000299 8.1e-07 57.8 62 56.5
Gohir.D12G029600 Gossypium hirsutum HOM05D000394 ORTHO05D000299 8.1e-07 57.8 62 56.5
Gorai.008G030400 Gossypium raimondii HOM05D000394 ORTHO05D000299 8.1e-07 57.8 62 56.5
Potri.009G119500 Populus trichocarpa HOM05D000394 ORTHO05D000299 8.1e-07 57.8 62 56.5
HanXRQChr03g0073381 Helianthus annuus HOM05D000394 ORTHO05D000299 1.4e-06 57.0 59 59.3
PSO731G0112 Papaver somniferum HOM05D000394 ORTHO05D000299 1.4e-06 57.0 70 47.1
Hund00242 Selenicereus undatus HOM05D000394 ORTHO05D000299 1.4e-06 57.0 62 56.5
DCAR_028970 Daucus carota HOM05D002530 ORTHO05D002802 1.8e-06 56.6 67 53.7
Dinv42042 Davidia involucrata HOM05D000394 ORTHO05D000299 1.8e-06 56.6 62 58.1
ECA240G1392 Erigeron canadensis HOM05D000394 ORTHO05D000299 1.8e-06 56.6 64 56.2
ECA240G2485 Erigeron canadensis HOM05D000394 ORTHO05D000299 1.8e-06 56.6 64 56.2
Medtr4g070790 Medicago truncatula HOM05D000394 ORTHO05D000299 1.8e-06 56.6 87 52.9
Cc00_g15070 Coffea canephora HOM05D000394 ORTHO05D000299 2.4e-06 56.2 62 59.7
Lalb_Chr11g0061341 Lupinus albus HOM05D000394 ORTHO05D000299 3.1e-06 55.8 62 56.5
COL.COLO4_18483 Corchorus olitorius HOM05D000394 ORTHO05D000299 4.0e-06 55.5 62 54.8
Lsat_1_v5_gn_9_108160 Lactuca sativa HOM05D000394 ORTHO05D000299 4.0e-06 55.5 64 54.7
PSO764G0352 Papaver somniferum HOM05D000394 ORTHO05D000299 4.0e-06 55.5 70 47.1
arahy.Tifrunner.gnm1.ann1.CN4LCL Arachis hypogaea HOM05D000394 ORTHO05D000299 5.2e-06 55.1 62 56.5
arahy.Tifrunner.gnm1.ann1.LU4RHL Arachis hypogaea HOM05D000394 ORTHO05D000299 5.2e-06 55.1 62 56.5
Lsat_1_v5_gn_5_119461 Lactuca sativa HOM05D000394 ORTHO05D000299 5.2e-06 55.1 59 57.6
Aa31LG7G15000 Aethionema arabicum HOM05D000394 ORTHO05D000299 6.8e-06 54.7 62 54.8
Ciclev10028023m.g Citrus clementina HOM05D000394 ORTHO05D000299 6.8e-06 54.7 62 54.8
THA.LOC104824810 Tarenaya hassleriana HOM05D000394 ORTHO05D000299 6.8e-06 54.7 67 52.2
CiPaw.06G133500 Carya illinoinensis HOM05D000394 ORTHO05D000299 8.9e-06 54.3 62 56.5
CiPaw.10G121700 Carya illinoinensis HOM05D000394 ORTHO05D000299 8.9e-06 54.3 62 56.5


User provided reference genes

Program Settings