Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G30346 Trifolium pratense HOM05D002551 ORTHO05D002832 1.3e-51 206.1 105 100.0
TPR.G21122 Trifolium pratense HOM05D002551 ORTHO05D002832 8.5e-46 186.8 105 90.5
Medtr7g079780 Medicago truncatula HOM05D002551 ORTHO05D002832 1.0e-38 163.3 103 82.5
Medtr7g079770 Medicago truncatula HOM05D002551 ORTHO05D002832 3.8e-38 161.4 103 82.5
Medtr7g079740 Medicago truncatula HOM05D002551 ORTHO05D002832 8.5e-38 160.2 103 83.5
Medtr7g079820 Medicago truncatula HOM05D002551 ORTHO05D002832 1.9e-37 159.1 103 83.5
Medtr7g079730 Medicago truncatula HOM05D002551 ORTHO05D002832 4.2e-37 157.9 103 82.5
TPR.G28217 Trifolium pratense HOM05D002551 ORTHO05D002832 1.8e-35 152.5 103 82.5
TPR.G7474 Trifolium pratense HOM05D002551 ORTHO05D002832 1.8e-35 152.5 99 80.8
Psat0s4851g0160 Pisum sativum HOM05D002551 ORTHO05D002832 3.5e-31 138.3 101 72.3
Psat0s7016g0040 Pisum sativum HOM05D002551 ORTHO05D002832 3.5e-31 138.3 101 72.3
TPR.G13819 Trifolium pratense HOM05D002551 ORTHO05D002832 1.3e-30 136.3 81 86.4
TPR.G39874 Trifolium pratense HOM05D002551 ORTHO05D002832 1.5e-29 132.9 77 84.4
Psat0s4055g0080 Pisum sativum HOM05D002551 ORTHO05D002832 4.1e-24 114.8 98 66.3
Ca_10865_v3 Cicer arietinum L. HOM05D002551 ORTHO05D002832 2.0e-23 112.5 73 74.0
Medtr1g103400 Medicago truncatula HOM05D002551 ORTHO05D002832 5.9e-23 110.9 73 71.2
Ca_10867_v3 Cicer arietinum L. HOM05D002551 ORTHO05D002832 6.5e-22 107.5 80 62.5
Psat6g206160 Pisum sativum HOM05D002551 ORTHO05D002832 1.2e-20 103.2 73 71.2
Psat6g206200 Pisum sativum HOM05D002551 ORTHO05D002832 8.0e-20 100.5 73 69.9
Glyma.20G146200 Glycine max HOM05D002551 ORTHO05D002832 5.2e-19 97.8 102 54.9
Glyma.20G148200 Glycine max HOM05D002551 ORTHO05D002832 5.2e-19 97.8 102 54.9
Lj5g0023538 Lotus japonicus HOM05D002551 ORTHO05D002832 5.7e-18 94.4 71 62.0
Phvul.007G059700 Phaseolus vulgaris HOM05D002551 ORTHO05D002832 1.3e-17 93.2 98 52.0
Phvul.007G059725 Phaseolus vulgaris HOM05D002551 ORTHO05D002832 1.3e-17 93.2 98 52.0
Phvul.007G059750 Phaseolus vulgaris HOM05D002551 ORTHO05D002832 1.3e-17 93.2 98 52.0
Phvul.007G059775 Phaseolus vulgaris HOM05D002551 ORTHO05D002832 1.3e-17 93.2 98 52.0
Phvul.007G060000 Phaseolus vulgaris HOM05D002551 ORTHO05D002832 1.3e-17 93.2 98 52.0
Glyma.10G246500 Glycine max HOM05D002551 ORTHO05D002832 1.8e-16 89.4 79 55.7
VMungo0331G0684 Vigna mungo HOM05D002551 ORTHO05D002832 2.4e-16 89.0 105 47.6
Lj5g0023246 Lotus japonicus HOM05D002551 ORTHO05D002832 2.7e-15 85.5 70 58.6
Phvul.007G059800 Phaseolus vulgaris HOM05D002551 ORTHO05D002832 1.0e-14 83.6 74 56.8
Glyma.10G246300 Glycine max HOM05D002551 ORTHO05D002832 5.0e-14 81.3 70 51.4
Lalb_Chr22g0356821 Lupinus albus HOM05D002551 ORTHO05D002832 8.5e-14 80.5 71 52.1
Lalb_Chr06g0170401 Lupinus albus HOM05D002551 ORTHO05D002832 1.1e-13 80.1 69 52.2
Lalb_Chr06g0170421 Lupinus albus HOM05D002551 ORTHO05D002832 1.1e-13 80.1 69 52.2
Glyma.20G148300 Glycine max HOM05D002551 ORTHO05D002832 1.9e-13 79.3 69 52.2
Glyma.20G148400 Glycine max HOM05D002551 ORTHO05D002832 1.9e-13 79.3 69 52.2
VMungo0720G0948 Vigna mungo HOM05D002551 ORTHO05D002832 3.2e-13 78.6 73 52.1
VMungo0720G2384 Vigna mungo HOM05D002551 ORTHO05D002832 9.5e-13 77.0 74 51.4
arahy.Tifrunner.gnm1.ann1.E5WGR0 Arachis hypogaea HOM05D002551 ORTHO05D002832 4.0e-11 71.6 79 44.3
arahy.Tifrunner.gnm1.ann1.6TFR0H Arachis hypogaea HOM05D002551 ORTHO05D002832 5.2e-11 71.2 76 44.7
Glyma.10G246401 Glycine max HOM05D002551 ORTHO05D002832 6.8e-11 70.9 72 45.8
Psat5g199920 Pisum sativum HOM05D002551 ORTHO05D002832 1.2e-07 60.1 38 73.7
Psat0s5g0160 Pisum sativum HOM05D002551 ORTHO05D002832 2.0e-07 59.3 65 50.8
SHI00485 Sapria himalayana HOM05D002551 ORTHO05D002832 2.7e-07 58.9 71 35.2
Lalb_Chr06g0170441 Lupinus albus HOM05D002551 ORTHO05D002832 1.0e-06 57.0 55 47.3
QL06p001653 Quercus lobata HOM05D002551 ORTHO05D002832 1.3e-06 56.6 79 34.2
TAR362G0951 Trochodendron aralioides HOM05D002551 ORTHO05D002832 1.3e-06 56.6 79 31.6
arahy.Tifrunner.gnm1.ann1.R5FKIY Arachis hypogaea HOM05D002551 ORTHO05D002832 2.3e-06 55.8 72 33.3
Manes.05G079000 Manihot esculenta HOM05D002551 ORTHO05D002832 2.3e-06 55.8 77 33.8
arahy.Tifrunner.gnm1.ann1.WD5WT3 Arachis hypogaea HOM05D002551 ORTHO05D002832 2.9e-06 55.5 72 34.7
Ah.02g111200 Amaranthus hybridus HOM05D002551 ORTHO05D002832 3.8e-06 55.1 68 35.3
EL10Ac5g10531 Beta vulgaris HOM05D002551 ORTHO05D002832 3.8e-06 55.1 68 33.8
Sc24g0003280 Simmondsia chinensis HOM05D002551 ORTHO05D002832 3.8e-06 55.1 72 33.3
ECA247G2018 Erigeron canadensis HOM05D002551 ORTHO05D002832 5.0e-06 54.7 77 32.5
Nitab4.5_0002307g0040 Nicotiana tabacum HOM05D002551 ORTHO05D002832 5.0e-06 54.7 92 32.6
Nitab4.5_0004062g0030 Nicotiana tabacum HOM05D002551 ORTHO05D002832 6.6e-06 54.3 93 33.3
CANSAT78G1619 Cannabis sativa HOM05D002551 ORTHO05D002832 8.6e-06 53.9 77 31.2
CANSAT78G2456 Cannabis sativa HOM05D002551 ORTHO05D002832 8.6e-06 53.9 77 31.2


User provided reference genes

Program Settings