Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G30189 Trifolium pratense HOM05D008718 ORTHO05D010957 5.0e-51 204.1 103 100.0
TPR.G5368 Trifolium pratense HOM05D008718 ORTHO05D000022 8.4e-22 107.1 95 54.7
TPR.G4558 Trifolium pratense HOM05D000101 ORTHO05D000089 9.2e-21 103.6 88 56.8
TPR.G34821 Trifolium pratense HOM05D008718 ORTHO05D010957 1.0e-19 100.1 79 64.6
TPR.G21331 Trifolium pratense HOM05D000003 ORTHO05D000022 2.1e-17 92.4 91 49.5
TPR.G544 Trifolium pratense HOM05D008718 ORTHO05D010957 2.8e-17 92.0 65 69.2
TPR.G17895 Trifolium pratense HOM05D000003 ORTHO05D000022 3.6e-17 91.7 95 47.4
TPR.G35524 Trifolium pratense HOM05D008718 ORTHO05D010957 3.6e-17 91.7 100 48.0
TPR.G36503 Trifolium pratense HOM05D008718 ORTHO05D010957 3.1e-16 88.6 95 47.4
TPR.G33754 Trifolium pratense HOM05D005905 ORTHO05D005996 2.2e-14 82.4 67 62.7
Sabra09G0061300 Salix brachista HOM05D000003 ORTHO05D000022 4.6e-12 74.7 93 41.9
Sabra01G0106600 Salix brachista HOM05D000003 ORTHO05D000022 7.8e-12 73.9 93 41.9
Lalb_Chr09g0330401 Lupinus albus HOM05D000155 ORTHO05D000022 6.6e-11 70.9 90 40.0
TPR.G10331 Trifolium pratense HOM05D008718 ORTHO05D000022 6.6e-11 70.9 93 47.3
arahy.Tifrunner.gnm1.ann1.PA7RNP Arachis hypogaea HOM05D000003 ORTHO05D000022 2.5e-10 68.9 90 45.6
arahy.Tifrunner.gnm1.ann1.C14R7W Arachis hypogaea HOM05D000003 ORTHO05D000022 3.3e-10 68.6 90 44.4
Lalb_Chr07g0182561 Lupinus albus HOM05D000155 ORTHO05D000022 1.6e-09 66.2 92 38.0
Lj1g0018212 Lotus japonicus HOM05D000003 ORTHO05D000022 2.8e-09 65.5 92 40.2
TPR.G2407 Trifolium pratense HOM05D008718 ORTHO05D010957 2.8e-09 65.5 84 44.0
arahy.Tifrunner.gnm1.ann1.3ZGA1D Arachis hypogaea HOM05D000155 ORTHO05D000022 6.2e-09 64.3 95 36.8
TPR.G2830 Trifolium pratense HOM05D008718 ORTHO05D010957 6.2e-09 64.3 47 63.8
Ca_11916_v3 Cicer arietinum L. HOM05D000003 ORTHO05D000022 1.4e-08 63.2 94 39.4
Lj1g0013654 Lotus japonicus HOM05D000155 ORTHO05D000022 5.3e-08 61.2 92 34.8
Ca_27941_v3 Cicer arietinum L. HOM05D000085 ORTHO05D013008 9.0e-08 60.5 88 39.8
Lj4g0027011 Lotus japonicus HOM05D000003 ORTHO05D000022 1.2e-07 60.1 91 35.2
arahy.Tifrunner.gnm1.ann1.WYFF13 Arachis hypogaea HOM05D000155 ORTHO05D000022 1.5e-07 59.7 93 34.4
Ca_11781_v3 Cicer arietinum L. HOM05D000155 ORTHO05D000022 2.6e-07 58.9 94 37.2
Lalb_Chr14g0364311 Lupinus albus HOM05D008718 ORTHO05D010957 2.6e-07 58.9 64 42.2
COL.COLO4_01560 Corchorus olitorius HOM05D022577 ORTHO05D010957 4.5e-07 58.2 73 45.2
COL.COLO4_02464 Corchorus olitorius HOM05D022577 ORTHO05D010957 4.5e-07 58.2 73 45.2
COL.COLO4_03155 Corchorus olitorius HOM05D022577 ORTHO05D010957 4.5e-07 58.2 73 45.2
COL.COLO4_03198 Corchorus olitorius HOM05D022577 ORTHO05D010957 4.5e-07 58.2 73 45.2
VMungo1383G2358 Vigna mungo HOM05D000005 ORTHO05D000012 4.5e-07 58.2 98 37.8
COL.COLO4_19293 Corchorus olitorius HOM05D000155 ORTHO05D000022 7.6e-07 57.4 89 39.3
Lalb_Chr05g0214691 Lupinus albus HOM05D008718 ORTHO05D010957 1.7e-06 56.2 64 40.6
Psat1g119200 Pisum sativum HOM05D000003 ORTHO05D000022 2.9e-06 55.5 98 37.8
Lj5g0005529 Lotus japonicus HOM05D000003 ORTHO05D000022 3.8e-06 55.1 92 37.0
Phvul.001G128200 Phaseolus vulgaris HOM05D000005 ORTHO05D000012 4.9e-06 54.7 98 35.7
Atru.chr4.1844 Acer truncatum HOM05D000003 ORTHO05D000022 8.4e-06 53.9 88 33.0


User provided reference genes

Program Settings