Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G30118 Trifolium pratense HOM05D000096 ORTHO05D000045 4.9e-34 147.1 69 100.0
TPR.G24766 Trifolium pratense HOM05D000096 ORTHO05D000045 4.7e-21 104.0 63 79.4
TPR.G3969 Trifolium pratense HOM05D000096 ORTHO05D000045 1.2e-19 99.4 63 74.6
TPR.G1726 Trifolium pratense HOM05D000096 ORTHO05D000045 2.7e-16 88.2 56 76.8
TPR.G33771 Trifolium pratense HOM05D000096 ORTHO05D000045 2.3e-15 85.1 63 71.4
Medtr2g016390 Medicago truncatula HOM05D000096 ORTHO05D000045 1.1e-14 82.8 63 57.1
Medtr7g060105 Medicago truncatula HOM05D000096 ORTHO05D000045 1.1e-14 82.8 61 60.7
TPR.G9630 Trifolium pratense HOM05D000096 ORTHO05D000045 9.6e-14 79.7 63 58.7
Medtr0296s0010 Medicago truncatula HOM05D000096 ORTHO05D000045 8.1e-13 76.6 64 59.4
Medtr8g022960 Medicago truncatula HOM05D000096 ORTHO05D000045 4.0e-12 74.3 63 54.0
Medtr6g071545 Medicago truncatula HOM05D000096 ORTHO05D000045 5.3e-12 73.9 66 53.0
Medtr4g062370 Medicago truncatula HOM05D000096 ORTHO05D000045 9.0e-12 73.2 61 55.7
Medtr7g050355 Medicago truncatula HOM05D000096 ORTHO05D000045 9.0e-12 73.2 63 54.0
Medtr1g054110 Medicago truncatula HOM05D000096 ORTHO05D000045 2.0e-11 72.0 63 47.6
Medtr4g076760 Medicago truncatula HOM05D000096 ORTHO05D000045 2.6e-11 71.6 68 51.5
TPR.G325 Trifolium pratense HOM05D000096 ORTHO05D000045 3.4e-11 71.2 61 55.7
TPR.G24036 Trifolium pratense HOM05D000096 ORTHO05D009933 1.7e-10 68.9 61 57.4
TPR.G5052 Trifolium pratense HOM05D000096 ORTHO05D000045 2.9e-10 68.2 61 55.7
Medtr7g031700 Medicago truncatula HOM05D000096 ORTHO05D000045 4.9e-10 67.4 53 58.5
TPR.G20668 Trifolium pratense HOM05D000096 ORTHO05D000045 4.9e-10 67.4 55 58.2
TPR.G9555 Trifolium pratense HOM05D000096 ORTHO05D000045 8.4e-10 66.6 61 55.7
Medtr5g087830 Medicago truncatula HOM05D000096 ORTHO05D000045 1.9e-09 65.5 50 56.0
Medtr5g032840 Medicago truncatula HOM05D000096 ORTHO05D000045 2.4e-09 65.1 63 46.0
Medtr7g027013 Medicago truncatula HOM05D000096 ORTHO05D000045 4.2e-09 64.3 57 57.9
TPR.G29994 Trifolium pratense HOM05D000096 ORTHO05D000045 4.2e-09 64.3 40 72.5
ECA233G1394 Erigeron canadensis HOM05D000096 ORTHO05D000045 5.4e-09 63.9 61 49.2
ECA240G2989 Erigeron canadensis HOM05D000096 ORTHO05D000045 5.4e-09 63.9 61 49.2
Medtr3g055445 Medicago truncatula HOM05D000096 ORTHO05D000045 5.4e-09 63.9 61 47.5
ECA236G0125 Erigeron canadensis HOM05D000096 ORTHO05D000045 7.1e-09 63.5 66 43.9
Medtr5g071700 Medicago truncatula HOM05D000096 ORTHO05D000045 9.3e-09 63.2 63 49.2
ECA236G4996 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.2e-08 62.8 61 47.5
ECA233G3752 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.6e-08 62.4 61 45.9
ECA232G3959 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.1e-08 62.0 61 47.5
ECA238G3552 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.7e-08 61.6 61 47.5
Medtr1g057360 Medicago truncatula HOM05D000096 ORTHO05D000045 4.6e-08 60.8 48 56.2
ECA234G0183 Erigeron canadensis HOM05D000096 ORTHO05D000045 6.0e-08 60.5 61 45.9
ECA247G1956 Erigeron canadensis HOM05D000096 ORTHO05D000045 6.0e-08 60.5 63 42.9
ECA232G0939 Erigeron canadensis HOM05D000096 ORTHO05D000045 7.9e-08 60.1 61 44.3
ECA234G1666 Erigeron canadensis HOM05D000096 ORTHO05D000045 7.9e-08 60.1 62 45.2
ECA238G2772 Erigeron canadensis HOM05D000096 ORTHO05D000045 7.9e-08 60.1 62 45.2
PGSC0003DMG400033371 Solanum tuberosum HOM05D000096 ORTHO05D000045 1.0e-07 59.7 61 49.2
PGSC0003DMG400005510 Solanum tuberosum HOM05D000096 ORTHO05D000045 1.3e-07 59.3 61 49.2
ECA238G1832 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.3e-07 58.5 64 46.9
ECA248G3105 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.3e-07 58.5 61 42.6
C09p46800 Brassica napus HOM05D000096 ORTHO05D000045 3.0e-07 58.2 62 45.2
ECA248G1927 Erigeron canadensis HOM05D000096 ORTHO05D000045 3.0e-07 58.2 62 45.2
LjContig00141g0020716 Lotus japonicus HOM05D000096 ORTHO05D000045 3.0e-07 58.2 61 44.3
ECA236G4162 Erigeron canadensis HOM05D000096 ORTHO05D000045 3.9e-07 57.8 61 44.3
A01p15630 Brassica napus HOM05D000096 ORTHO05D000045 5.1e-07 57.4 62 43.5
ECA233G3690 Erigeron canadensis HOM05D000096 ORTHO05D000045 5.1e-07 57.4 68 39.7
ECA247G2253 Erigeron canadensis HOM05D000096 ORTHO05D000045 5.1e-07 57.4 61 42.6
ECA238G1785 Erigeron canadensis HOM05D000096 ORTHO05D000045 6.7e-07 57.0 61 44.3
ECA232G2412 Erigeron canadensis HOM05D000096 ORTHO05D000045 8.7e-07 56.6 61 42.6
ECA233G1381 Erigeron canadensis HOM05D000096 ORTHO05D000045 8.7e-07 56.6 61 42.6
ECA240G2292 Erigeron canadensis HOM05D000096 ORTHO05D000045 8.7e-07 56.6 61 44.3
C05p57230 Brassica napus HOM05D000096 ORTHO05D000045 1.1e-06 56.2 62 43.5
ECA248G1544 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.5e-06 55.8 64 46.9
Lj1g0025291 Lotus japonicus HOM05D000096 ORTHO05D000045 1.5e-06 55.8 62 45.2
Medtr4g026335 Medicago truncatula HOM05D000096 ORTHO05D000045 1.5e-06 55.8 39 61.5
PGSC0003DMG400017067 Solanum tuberosum HOM05D000096 ORTHO05D000045 1.5e-06 55.8 51 54.9
Medtr2g013330 Medicago truncatula HOM05D000096 ORTHO05D000045 1.9e-06 55.5 61 45.9
TPR.G7462 Trifolium pratense HOM05D000096 ORTHO05D000045 1.9e-06 55.5 61 44.3
ECA232G2437 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.5e-06 55.1 63 41.3
ECA233G5779 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.5e-06 55.1 68 36.8
Lj6g0026524 Lotus japonicus HOM05D000096 ORTHO05D000045 2.5e-06 55.1 61 42.6
ECA238G0298 Erigeron canadensis HOM05D000096 ORTHO05D000045 3.3e-06 54.7 63 39.7
BolC3t17976H Brassica oleracea HOM05D000096 ORTHO05D000045 5.6e-06 53.9 62 41.9
CARHR114970 Cardamine hirsuta HOM05D000096 ORTHO05D000045 5.6e-06 53.9 56 42.9
CARHR115010 Cardamine hirsuta HOM05D000096 ORTHO05D000045 5.6e-06 53.9 61 41.0
Medtr2g055890 Medicago truncatula HOM05D000096 ORTHO05D000045 5.6e-06 53.9 61 45.9
TPR.G27026 Trifolium pratense HOM05D000096 ORTHO05D000045 5.6e-06 53.9 61 44.3
CARHR118900 Cardamine hirsuta HOM05D000096 ORTHO05D000045 7.4e-06 53.5 62 41.9
C07p01270 Brassica napus HOM05D000096 ORTHO05D000045 9.6e-06 53.1 62 41.9
BolC2t08343H Brassica oleracea HOM05D000096 ORTHO05D000045 9.6e-06 53.1 61 42.6
BolC7t45260H Brassica oleracea HOM05D000096 ORTHO05D000045 9.6e-06 53.1 61 42.6
TPR.G14299 Trifolium pratense HOM05D000096 ORTHO05D000045 9.6e-06 53.1 61 42.6


User provided reference genes

Program Settings