Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G30085 Trifolium pratense HOM05D000044 ORTHO05D013830 2.6e-49 198.4 98 100.0
Psat1g168960 Pisum sativum HOM05D000044 ORTHO05D000051 1.1e-23 113.2 112 56.2
Psat1g169000 Pisum sativum HOM05D000044 ORTHO05D000051 5.2e-21 104.4 112 53.6
Psat1g168920 Pisum sativum HOM05D000044 ORTHO05D000051 1.5e-20 102.8 112 52.7
Psat1g168680 Pisum sativum HOM05D000044 ORTHO05D000051 7.4e-20 100.5 117 47.9
Psat1g168800 Pisum sativum HOM05D000044 ORTHO05D000051 1.1e-18 96.7 111 54.1
TPR.G30086 Trifolium pratense HOM05D000044 ORTHO05D000051 1.1e-18 96.7 174 37.9
Psat1g168200 Pisum sativum HOM05D000044 ORTHO05D000051 2.0e-17 92.4 125 41.6
Psat1g168160 Pisum sativum HOM05D000044 ORTHO05D000051 2.6e-17 92.0 113 47.8
Ca_00802_v3 Cicer arietinum L. HOM05D000044 ORTHO05D000051 5.9e-17 90.9 176 36.9
TPR.G30092 Trifolium pratense HOM05D000044 ORTHO05D000051 1.0e-16 90.1 176 38.1
Medtr2g028980 Medicago truncatula HOM05D000044 ORTHO05D000051 2.2e-16 89.0 176 36.9
TPR.G26347 Trifolium pratense HOM05D000044 ORTHO05D000051 5.0e-16 87.8 177 35.6
Medtr2g029740 Medicago truncatula HOM05D000044 ORTHO05D000051 6.5e-16 87.4 176 34.7
Glyma.09G022500 Glycine max HOM05D000044 ORTHO05D000051 3.2e-15 85.1 171 33.9
Medtr2g029750 Medicago truncatula HOM05D000044 ORTHO05D000051 4.2e-15 84.7 176 35.8
Medtr2g029850 Medicago truncatula HOM05D000044 ORTHO05D000051 5.5e-15 84.3 176 35.2
Phvul.006G129600 Phaseolus vulgaris HOM05D000044 ORTHO05D000051 9.4e-15 83.6 171 33.9
Medtr2g029800 Medicago truncatula HOM05D000044 ORTHO05D000051 2.1e-14 82.4 176 34.1
Glyma.15G128700 Glycine max HOM05D000044 ORTHO05D000051 6.1e-14 80.9 171 33.3
Glyma.09G022400 Glycine max HOM05D000044 ORTHO05D000051 1.0e-13 80.1 171 33.9
Glyma.15G128800 Glycine max HOM05D000044 ORTHO05D000051 1.4e-13 79.7 172 33.7
VMungo0540G1091 Vigna mungo HOM05D000044 ORTHO05D000051 3.0e-13 78.6 175 32.0
Ca_00805_v3 Cicer arietinum L. HOM05D000044 ORTHO05D000051 6.8e-13 77.4 176 33.0
Ca_00804_v3 Cicer arietinum L. HOM05D000044 ORTHO05D000051 8.8e-13 77.0 176 33.0
Ca_00806_v3 Cicer arietinum L. HOM05D000044 ORTHO05D000051 8.8e-13 77.0 177 32.2
TPR.G30094 Trifolium pratense HOM05D000044 ORTHO05D000051 1.5e-12 76.3 176 34.1
TPR.G30093 Trifolium pratense HOM05D000044 ORTHO05D000051 2.6e-12 75.5 176 32.4
Medtr2g029820 Medicago truncatula HOM05D000044 ORTHO05D000051 4.4e-12 74.7 176 31.2
TPR.G26321 Trifolium pratense HOM05D000044 ORTHO05D000051 4.4e-12 74.7 190 32.1
Ca_00803_v3 Cicer arietinum L. HOM05D000044 ORTHO05D000051 1.3e-11 73.2 171 31.6
Lj6g0023707 Lotus japonicus HOM05D000044 ORTHO05D000051 1.7e-11 72.8 175 32.6
Medtr2g029830 Medicago truncatula HOM05D000044 ORTHO05D000051 2.8e-11 72.0 175 33.1
Glyma.09G022300 Glycine max HOM05D000044 ORTHO05D000051 3.7e-11 71.6 54 63.0
Medtr2g029815 Medicago truncatula HOM05D000044 ORTHO05D000051 4.8e-11 71.2 176 31.8
Lalb_Chr18g0057891 Lupinus albus HOM05D000044 ORTHO05D000051 1.1e-10 70.1 165 33.9
VMungo0540G0004 Vigna mungo HOM05D000044 ORTHO05D000051 1.4e-10 69.7 54 61.1
TPR.G558 Trifolium pratense HOM05D000044 ORTHO05D013830 2.4e-10 68.9 65 61.5
Glyma.15G129100 Glycine max HOM05D005639 ORTHO05D007234 3.1e-10 68.6 163 31.3
Medtr2g029910 Medicago truncatula HOM05D000044 ORTHO05D000051 3.1e-10 68.6 50 70.0
Glyma.09G023000 Glycine max HOM05D000044 ORTHO05D000051 4.1e-10 68.2 163 31.3
Glyma.09G022900 Glycine max HOM05D000044 ORTHO05D000051 5.4e-10 67.8 173 32.9
Lalb_Chr18g0057881 Lupinus albus HOM05D000044 ORTHO05D000051 5.4e-10 67.8 178 29.8
Phvul.006G129700 Phaseolus vulgaris HOM05D000044 ORTHO05D000051 5.4e-10 67.8 175 29.7
arahy.Tifrunner.gnm1.ann1.P4M8HI Arachis hypogaea HOM05D000044 ORTHO05D000051 7.0e-10 67.4 53 58.5
Lalb_Chr20g0119991 Lupinus albus HOM05D000044 ORTHO05D000051 7.0e-10 67.4 174 29.9
Lalb_Chr20g0120011 Lupinus albus HOM05D000044 ORTHO05D000051 7.0e-10 67.4 174 29.3
Lj6g0002639 Lotus japonicus HOM05D000044 ORTHO05D000051 9.1e-10 67.0 162 28.4
Lalb_Chr20g0120001 Lupinus albus HOM05D000044 ORTHO05D000051 1.2e-09 66.6 170 28.2
Phvul.006G129900 Phaseolus vulgaris HOM05D000044 ORTHO05D000051 1.2e-09 66.6 54 59.3
Glyma.15G129000 Glycine max HOM05D000044 ORTHO05D000051 2.0e-09 65.9 173 31.8
TPR.G31120 Trifolium pratense HOM05D000044 ORTHO05D412586 2.7e-09 65.5 44 65.9
Glyma.15G128901 Glycine max HOM05D000044 ORTHO05D009462 3.5e-09 65.1 63 58.7
TPR.G26341 Trifolium pratense HOM05D000044 ORTHO05D000051 4.5e-09 64.7 54 55.6
Medtr2g029860 Medicago truncatula HOM05D000044 ORTHO05D000051 5.9e-09 64.3 172 31.4
arahy.Tifrunner.gnm1.ann1.HKKE6B Arachis hypogaea HOM05D000044 ORTHO05D000051 7.7e-09 63.9 174 32.2
Medtr2g029560 Medicago truncatula HOM05D000044 ORTHO05D000051 7.7e-09 63.9 58 50.0
Phvul.006G129500 Phaseolus vulgaris HOM05D000044 ORTHO05D000051 7.7e-09 63.9 173 31.8
Sabra03G0160300 Salix brachista HOM05D000044 ORTHO05D000051 1.0e-08 63.5 105 36.2
VMungo0540G2398 Vigna mungo HOM05D000044 ORTHO05D000051 1.0e-08 63.5 173 31.8
Lj6g0012659 Lotus japonicus HOM05D000044 ORTHO05D000051 1.3e-08 63.2 54 51.9
arahy.Tifrunner.gnm1.ann1.SFR5Z3 Arachis hypogaea HOM05D000044 ORTHO05D000051 1.7e-08 62.8 174 31.6
arahy.Tifrunner.gnm1.ann1.Q4Q4LI Arachis hypogaea HOM05D000044 ORTHO05D000051 2.9e-08 62.0 176 30.1
TPR.G31123 Trifolium pratense HOM05D000044 ORTHO05D013830 2.9e-08 62.0 60 51.7
arahy.Tifrunner.gnm1.ann1.E75BK7 Arachis hypogaea HOM05D000044 ORTHO05D000051 3.8e-08 61.6 54 51.9
arahy.Tifrunner.gnm1.ann1.GB961F Arachis hypogaea HOM05D000044 ORTHO05D000051 3.8e-08 61.6 176 29.5
Glyma.09G022800 Glycine max HOM05D000044 ORTHO05D000051 3.8e-08 61.6 173 30.1
arahy.Tifrunner.gnm1.ann1.UPA5CM Arachis hypogaea HOM05D000044 ORTHO05D031621 5.0e-08 61.2 36 77.8
ClCG07G002700 Citrullus lanatus HOM05D000044 ORTHO05D000051 5.0e-08 61.2 106 37.7
TPR.G31124 Trifolium pratense HOM05D000044 ORTHO05D000051 5.0e-08 61.2 181 30.4
Phvul.006G130000 Phaseolus vulgaris HOM05D000044 ORTHO05D000051 6.5e-08 60.8 54 51.9
VMungo0540G1356 Vigna mungo HOM05D000044 ORTHO05D000051 6.5e-08 60.8 54 55.6
Phvul.006G129400 Phaseolus vulgaris HOM05D000044 ORTHO05D000051 8.5e-08 60.5 169 29.0
VMungo0540G2469 Vigna mungo HOM05D000044 ORTHO05D000051 8.5e-08 60.5 53 52.8
vmacro20353 Vaccinium macrocarpon HOM05D000044 ORTHO05D000051 1.1e-07 60.1 53 52.8
Medtr2g029730 Medicago truncatula HOM05D000044 ORTHO05D000051 1.9e-07 59.3 54 51.9
TPR.G30095 Trifolium pratense HOM05D000044 ORTHO05D000051 1.9e-07 59.3 54 50.0
TPR.G30096 Trifolium pratense HOM05D000044 ORTHO05D013830 1.9e-07 59.3 57 57.9
CDE05G3660 Ceratophyllum demersum HOM05D000044 ORTHO05D031621 2.5e-07 58.9 87 37.9
Lalb_Chr18g0057901 Lupinus albus HOM05D000044 ORTHO05D000051 3.2e-07 58.5 53 50.9
Phvul.006G129800 Phaseolus vulgaris HOM05D000044 ORTHO05D000051 3.2e-07 58.5 53 50.9
Sabra13G0079400 Salix brachista HOM05D000044 ORTHO05D000051 3.2e-07 58.5 107 34.6
arahy.Tifrunner.gnm1.ann1.SKGW0C Arachis hypogaea HOM05D000044 ORTHO05D000051 4.2e-07 58.2 54 50.0
MD03G1013700 Malus domestica HOM05D000044 ORTHO05D000051 4.2e-07 58.2 53 54.7
Phvul.006G130100 Phaseolus vulgaris HOM05D000044 ORTHO05D000051 5.5e-07 57.8 54 53.7
Haze_22998 Corylus avellana HOM05D000044 ORTHO05D000051 7.2e-07 57.4 99 36.4
CsaV3_5G012670 Cucumis sativus L. HOM05D000044 ORTHO05D174399 7.2e-07 57.4 57 45.6
Phvul.006G129200 Phaseolus vulgaris HOM05D000044 ORTHO05D000051 7.2e-07 57.4 168 28.0
Ciclev10015793m.g Citrus clementina HOM05D000044 ORTHO05D000051 9.4e-07 57.0 54 51.9
arahy.Tifrunner.gnm1.ann1.49I11A Arachis hypogaea HOM05D000044 ORTHO05D000051 1.2e-06 56.6 48 54.2
arahy.Tifrunner.gnm1.ann1.9QT5JT Arachis hypogaea HOM05D000044 ORTHO05D000051 1.2e-06 56.6 48 54.2
BcaB01g02846 Brassica carinata HOM05D000044 ORTHO05D000051 1.6e-06 56.2 54 51.9
THA.LOC104811054 Tarenaya hassleriana HOM05D000044 ORTHO05D000051 1.6e-06 56.2 54 50.0
BcaC01g04755 Brassica carinata HOM05D000044 ORTHO05D000051 2.1e-06 55.8 54 51.9
C03p34140 Brassica napus HOM05D000044 ORTHO05D000051 2.1e-06 55.8 54 51.9
BolC3t15723H Brassica oleracea HOM05D000044 ORTHO05D000051 2.1e-06 55.8 54 51.9
Ciclev10015783m.g Citrus clementina HOM05D000044 ORTHO05D000051 2.1e-06 55.8 54 51.9
MD03G1012800 Malus domestica HOM05D000044 ORTHO05D000051 2.1e-06 55.8 53 52.8
MD03G1012900 Malus domestica HOM05D000044 ORTHO05D000051 2.1e-06 55.8 53 52.8
MD03G1013300 Malus domestica HOM05D000044 ORTHO05D000051 2.1e-06 55.8 53 52.8
ClCG02G023750 Citrullus lanatus HOM05D000044 ORTHO05D028964 2.7e-06 55.5 88 38.6
SEGI_07387 Sequoiadendron giganteum HOM05D000044 ORTHO05D000051 2.7e-06 55.5 108 35.2
VMungo0540G2395 Vigna mungo HOM05D000044 ORTHO05D000051 2.7e-06 55.5 169 29.0
AL5G28640 Arabidopsis lyrata HOM05D000044 ORTHO05D000051 3.6e-06 55.1 54 50.0
DCAR_019782 Daucus carota HOM05D000044 ORTHO05D000051 3.6e-06 55.1 80 35.0
ClCG02G023730 Citrullus lanatus HOM05D000044 ORTHO05D000051 4.7e-06 54.7 96 33.3
MBI15_g32554_MAGBIO Magnolia biondii HOM05D000044 ORTHO05D029853 4.7e-06 54.7 109 31.2
Peaxi162Scf00329g00911 Petunia axillaris HOM05D000044 ORTHO05D000051 4.7e-06 54.7 53 47.2
Ciclev10015790m.g Citrus clementina HOM05D000044 ORTHO05D000051 6.1e-06 54.3 54 50.0
AT3G49110 Arabidopsis thaliana HOM05D000044 ORTHO05D000051 8.0e-06 53.9 54 50.0
A01p24970 Brassica napus HOM05D000044 ORTHO05D000051 8.0e-06 53.9 54 50.0
BraA01t02409Z Brassica rapa HOM05D000044 ORTHO05D000051 8.0e-06 53.9 54 50.0
CARHR157940 Cardamine hirsuta HOM05D000044 ORTHO05D000051 8.0e-06 53.9 37 70.3
Psat5g131320 Pisum sativum HOM05D000044 ORTHO05D000051 8.0e-06 53.9 107 35.5
Thecc.09G216000 Theobroma cacao HOM05D000044 ORTHO05D000051 8.0e-06 53.9 47 55.3
VMungo0540G2045 Vigna mungo HOM05D000044 ORTHO05D000051 8.0e-06 53.9 168 28.6


User provided reference genes

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