Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G30050 Trifolium pratense HOM05D007514 ORTHO05D009469 1.1e-66 256.5 135 100.0
Medtr8g075960 Medicago truncatula HOM05D007514 ORTHO05D009469 1.2e-47 193.4 184 62.0
Ca_22373_v3 Cicer arietinum L. HOM05D007514 ORTHO05D009469 2.1e-41 172.6 184 58.7
Psat4g099040 Pisum sativum HOM05D007514 ORTHO05D009469 4.0e-40 168.3 183 56.8
Lj4g0013490 Lotus japonicus HOM05D007514 ORTHO05D009469 2.4e-32 142.5 185 51.9
Lalb_Chr05g0229901 Lupinus albus HOM05D007514 ORTHO05D009469 1.3e-30 136.7 95 73.7
MD02G1133200 Malus domestica HOM05D007514 ORTHO05D009469 1.1e-29 133.7 105 65.7
Glyma.02G048800 Glycine max HOM05D007514 ORTHO05D009469 1.4e-29 133.3 99 73.7
Glyma.16G128900 Glycine max HOM05D007514 ORTHO05D009469 1.9e-29 132.9 102 69.6
Lsat_1_v5_gn_3_74241 Lactuca sativa HOM05D007514 ORTHO05D009469 5.4e-29 131.3 104 67.3
Sabra05G0094100 Salix brachista HOM05D007514 ORTHO05D009469 9.3e-29 130.6 109 64.2
VMungo0251G0111 Vigna mungo HOM05D007514 ORTHO05D009469 1.2e-28 130.2 102 68.6
DCAR_016611 Daucus carota HOM05D007514 ORTHO05D009469 1.6e-28 129.8 103 66.0
Gohir.A02G170200 Gossypium hirsutum HOM05D007514 ORTHO05D009469 1.0e-27 127.1 112 63.4
Atru.chr3.793 Acer truncatum HOM05D007514 ORTHO05D009469 1.3e-27 126.7 73 82.2
Potri.005G115000 Populus trichocarpa HOM05D007514 ORTHO05D009469 1.3e-27 126.7 110 62.7
Prupe.7G167500 Prunus persica HOM05D007514 ORTHO05D009469 1.3e-27 126.7 123 56.9
Hma1.2p1_0743F.1_g211610 Hydrangea macrophylla HOM05D007514 ORTHO05D009469 3.0e-27 125.6 100 66.0
QL06p032616 Quercus lobata HOM05D007514 ORTHO05D009469 3.0e-27 125.6 103 64.1
Gorai.003G010100 Gossypium raimondii HOM05D007514 ORTHO05D009469 5.1e-27 124.8 112 62.5
Phvul.003G262200 Phaseolus vulgaris HOM05D007514 ORTHO05D009469 5.1e-27 124.8 102 66.7
arahy.Tifrunner.gnm1.ann1.EYR4CZ Arachis hypogaea HOM05D007514 ORTHO05D009469 1.1e-26 123.6 77 79.2
arahy.Tifrunner.gnm1.ann1.JXSY0Y Arachis hypogaea HOM05D007514 ORTHO05D009469 1.1e-26 123.6 77 79.2
COL.COLO4_21918 Corchorus olitorius HOM05D007514 ORTHO05D009469 2.5e-26 122.5 105 63.8
Gohir.D03G009800 Gossypium hirsutum HOM05D007514 ORTHO05D009469 2.5e-26 122.5 112 62.5
Duzib264G0291 Durio zibethinus HOM05D007514 ORTHO05D009469 3.3e-26 122.1 103 62.1
Lj2P467T19 Lonicera japonica HOM05D007514 ORTHO05D009469 5.6e-26 121.3 95 62.1
Manes.02G103801 Manihot esculenta HOM05D007514 ORTHO05D009469 7.3e-26 120.9 100 61.0
Sc16g0002120 Simmondsia chinensis HOM05D007514 ORTHO05D009469 7.3e-26 120.9 103 58.3
MELO3C007896.2 Cucumis melo HOM05D007514 ORTHO05D009469 1.3e-25 120.2 87 69.0
FvH4_1g11940 Fragaria vesca HOM05D007514 ORTHO05D009469 1.3e-25 120.2 71 78.9
FAN19G0235 Fragaria x ananassa HOM05D007514 ORTHO05D009469 1.3e-25 120.2 71 78.9
FAN23G2896 Fragaria x ananassa HOM05D007514 ORTHO05D009469 1.3e-25 120.2 71 78.9
FAN26G2491 Fragaria x ananassa HOM05D007514 ORTHO05D009469 1.3e-25 120.2 71 78.9
ClCG01G020240 Citrullus lanatus HOM05D007514 ORTHO05D009469 1.6e-25 119.8 96 64.6
Dinv33625 Davidia involucrata HOM05D007514 ORTHO05D009469 1.6e-25 119.8 75 74.7
Thecc.01G019700 Theobroma cacao HOM05D007514 ORTHO05D009469 1.6e-25 119.8 106 60.4
Cpa.g.sc6.242 Carica papaya HOM05D007514 ORTHO05D009469 2.1e-25 119.4 103 60.2
Ciclev10026620m.g Citrus clementina HOM05D007514 ORTHO05D009469 2.8e-25 119.0 103 61.2
SGA_v2.0_scaffold234G43648 Striga asiatica HOM05D007514 ORTHO05D009469 2.8e-25 119.0 72 77.8
TWI09G1362 Tripterygium wilfordii HOM05D007514 ORTHO05D009469 2.8e-25 119.0 102 60.8
Oeu059507.1 Olea europaea HOM05D007514 ORTHO05D009469 3.6e-25 118.6 107 58.9
CiPaw.07G058000 Carya illinoinensis HOM05D007514 ORTHO05D009469 4.8e-25 118.2 87 65.5
CsaV3_6G047030 Cucumis sativus L. HOM05D007514 ORTHO05D009469 4.8e-25 118.2 98 62.2
CARHR108460 Cardamine hirsuta HOM05D007514 ORTHO05D009469 6.2e-25 117.9 98 62.2
AUR62011597 Chenopodium quinoa HOM05D007514 ORTHO05D009469 1.1e-24 117.1 102 59.8
THA.LOC104819752 Tarenaya hassleriana HOM05D007514 ORTHO05D009469 1.1e-24 117.1 98 58.2
PGR119G2084 Punica granatum HOM05D007514 ORTHO05D009469 1.4e-24 116.7 89 65.2
CANSAT01G2848 Cannabis sativa HOM05D007514 ORTHO05D009469 2.4e-24 115.9 70 78.6
Cc07_g10640 Coffea canephora HOM05D007514 ORTHO05D009469 2.4e-24 115.9 70 74.3
Sed0026037 Sechium edule HOM05D007514 ORTHO05D009469 2.4e-24 115.9 72 73.6
MSTRG.883 Avicennia marina HOM05D007514 ORTHO05D009469 3.1e-24 115.5 103 60.2
Cfa006967 Carpinus fangiana HOM05D007514 ORTHO05D009469 3.1e-24 115.5 87 65.5
BcaB03g16581 Brassica carinata HOM05D007514 ORTHO05D009469 4.0e-24 115.2 98 59.2
A07p02710 Brassica napus HOM05D007514 ORTHO05D009469 4.0e-24 115.2 98 60.2
BraA07t28071Z Brassica rapa HOM05D007514 ORTHO05D009469 4.0e-24 115.2 98 60.2
Nitab4.5_0001959g0010 Nicotiana tabacum HOM05D007514 ORTHO05D009469 4.0e-24 115.2 84 70.2
Nitab4.5_0006286g0070 Nicotiana tabacum HOM05D007514 ORTHO05D009469 4.0e-24 115.2 84 70.2
Haze_03771 Corylus avellana HOM05D007514 ORTHO05D009469 6.9e-24 114.4 87 65.5
Os06g0715200 Oryza sativa ssp. japonica HOM05D007514 ORTHO05D009469 6.9e-24 114.4 70 74.3
Ah.01g021120 Amaranthus hybridus HOM05D007514 ORTHO05D009469 9.0e-24 114.0 108 57.4
Sp3g31390 Schrenkiella parvula HOM05D007514 ORTHO05D009469 1.2e-23 113.6 112 57.1
BcaC06g36349 Brassica carinata HOM05D007514 ORTHO05D009469 1.5e-23 113.2 111 55.9
C07p05010 Brassica napus HOM05D007514 ORTHO05D009469 1.5e-23 113.2 111 55.9
BolC7t40902H Brassica oleracea HOM05D007514 ORTHO05D009469 1.5e-23 113.2 111 55.9
Peaxi162Scf00083g00065 Petunia axillaris HOM05D007514 ORTHO05D009469 1.5e-23 113.2 83 67.5
Zm00001eb228020 Zea mays HOM05D007514 ORTHO05D009469 2.0e-23 112.8 78 67.9
AT2G17972 Arabidopsis thaliana HOM05D007514 ORTHO05D009469 2.6e-23 112.5 99 59.6
MBI05_g15346_MAGBIO Magnolia biondii HOM05D007514 ORTHO05D009469 2.6e-23 112.5 99 56.6
PGSC0003DMG401003636 Solanum tuberosum HOM05D007514 ORTHO05D009469 3.4e-23 112.1 102 59.8
AL3G51000 Arabidopsis lyrata HOM05D007514 ORTHO05D009469 4.5e-23 111.7 111 55.9
Rhsim08G0034000 Rhododendron simsii HOM05D007514 ORTHO05D009469 4.5e-23 111.7 102 57.8
EL10Ac9g21968 Beta vulgaris HOM05D007514 ORTHO05D009469 5.8e-23 111.3 70 72.9
Carub.0003s3210 Capsella rubella HOM05D007514 ORTHO05D009469 5.8e-23 111.3 99 56.6
unitig_26.g10012 Utricularia gibba HOM05D007514 ORTHO05D009469 5.8e-23 111.3 102 59.8
Thhalv10022884m.g Eutrema salsugineum HOM05D007514 ORTHO05D009469 7.6e-23 110.9 111 54.1
Migut.L00252 Erythranthe guttata HOM05D007514 ORTHO05D009469 9.9e-23 110.5 105 58.1
Migut.L00394 Erythranthe guttata HOM05D007514 ORTHO05D009469 9.9e-23 110.5 105 58.1
Sopen02g028770 Solanum pennellii HOM05D007514 ORTHO05D009469 1.3e-22 110.2 72 72.2
Aqoxy5G01772 Aquilegia oxysepala HOM05D007514 ORTHO05D009469 2.9e-22 109.0 116 50.9
CSS0010041 Camellia sinensis var. sinensis HOM05D007514 ORTHO05D009469 2.9e-22 109.0 97 58.8
CSS0030936 Camellia sinensis var. sinensis HOM05D007514 ORTHO05D009469 2.9e-22 109.0 97 58.8
Nn6g32368 Nelumbo nucifera HOM05D007514 ORTHO05D009469 3.8e-22 108.6 100 59.0
PSO541G1849 Papaver somniferum HOM05D007514 ORTHO05D009469 4.9e-22 108.2 105 56.2
Aa31LG8G15140 Aethionema arabicum HOM05D007514 ORTHO05D009469 6.4e-22 107.8 131 51.1
PSO675G8043 Papaver somniferum HOM05D007514 ORTHO05D009469 6.4e-22 107.8 105 56.2
HPP92_025365 Vanilla planifolia HOM05D007514 ORTHO05D009469 6.4e-22 107.8 111 51.4
Pp3c15_14110 Physcomitrium patens HOM05D007514 ORTHO05D009469 1.1e-21 107.1 93 55.9
arahy.Tifrunner.gnm1.ann1.KXHU4R Arachis hypogaea HOM05D007514 ORTHO05D009469 1.9e-21 106.3 72 76.4
SMO353G0320 Selaginella moellendorffii HOM05D007514 ORTHO05D009469 1.2e-20 103.6 96 53.1
Duzib147G0981 Durio zibethinus HOM05D007514 ORTHO05D009469 4.6e-20 101.7 97 60.8
Mapoly0011s0103 Marchantia polymorpha HOM05D007514 ORTHO05D009469 3.9e-19 98.6 67 68.7
TAR365G0263 Trochodendron aralioides HOM05D007514 ORTHO05D009469 1.5e-18 96.7 97 53.6
TAR365G1204 Trochodendron aralioides HOM05D007514 ORTHO05D009469 7.4e-18 94.4 97 52.6
AagrBONN_evm.TU.Sc2ySwM_344.4071 Anthoceros agrestis HOM05D007514 ORTHO05D009469 1.6e-17 93.2 99 48.5
FAN28G1094 Fragaria x ananassa HOM05D007514 ORTHO05D009469 2.8e-17 92.4 128 49.2
CAN.G66.6 Capsicum annuum HOM05D007514 ORTHO05D009469 6.2e-17 91.3 70 65.7
SEGI_16775 Sequoiadendron giganteum HOM05D007514 ORTHO05D009469 9.0e-16 87.4 96 50.0
Cre05.g245102 Chlamydomonas reinhardtii HOM05D007514 ORTHO05D009469 1.1e-13 80.5 57 61.4


User provided reference genes

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