Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G30010 Trifolium pratense HOM05D005057 ORTHO05D006570 9.7e-127 456.8 231 100.0
Medtr2g015860 Medicago truncatula HOM05D005057 ORTHO05D006570 4.0e-96 355.1 240 78.8
Psat1g199000 Pisum sativum HOM05D005057 ORTHO05D006570 3.5e-92 342.0 236 76.7
Ca_00428_v3 Cicer arietinum L. HOM05D005057 ORTHO05D006570 3.8e-83 312.0 202 78.2
Ca_30957_v3 Cicer arietinum L. HOM05D005057 ORTHO05D006570 4.7e-81 305.1 187 84.5
Lj6g0017686 Lotus japonicus HOM05D005057 ORTHO05D006570 1.3e-78 297.0 205 78.0
Lalb_Chr15g0089481 Lupinus albus HOM05D005057 ORTHO05D006570 4.1e-77 292.0 202 76.7
Phvul.006G176700 Phaseolus vulgaris HOM05D005057 ORTHO05D006570 5.4e-77 291.6 247 65.2
Glyma.13G230500 Glycine max HOM05D005057 ORTHO05D006570 7.0e-77 291.2 242 69.0
VMungo0540G0206 Vigna mungo HOM05D005057 ORTHO05D006570 1.6e-73 280.0 187 75.4
Lalb_Chr18g0059151 Lupinus albus HOM05D005057 ORTHO05D006570 5.8e-71 271.6 235 67.2
arahy.Tifrunner.gnm1.ann1.9TM733 Arachis hypogaea HOM05D005057 ORTHO05D006570 3.2e-69 265.8 173 78.0
arahy.Tifrunner.gnm1.ann1.E17GNY Arachis hypogaea HOM05D005057 ORTHO05D006570 3.2e-69 265.8 173 78.0
CANSAT35G0522 Cannabis sativa HOM05D005057 ORTHO05D006570 2.7e-68 262.7 232 63.4
Prupe.4G059900 Prunus persica HOM05D005057 ORTHO05D006570 4.6e-68 261.9 196 70.9
FvH4_3g07940 Fragaria vesca HOM05D005057 ORTHO05D006570 6.6e-67 258.1 230 63.0
Sed0014368 Sechium edule HOM05D005057 ORTHO05D006570 6.6e-67 258.1 206 66.5
QL05p046461 Quercus lobata HOM05D005057 ORTHO05D006570 1.1e-66 257.3 162 79.6
CiPaw.09G069000 Carya illinoinensis HOM05D005057 ORTHO05D006570 1.5e-66 256.9 230 61.7
Ciclev10014965m.g Citrus clementina HOM05D005057 ORTHO05D006570 1.9e-66 256.5 204 69.1
Haze_06250 Corylus avellana HOM05D005057 ORTHO05D006570 4.3e-66 255.4 212 64.6
ClCG03G007800 Citrullus lanatus HOM05D005057 ORTHO05D006570 5.6e-66 255.0 206 67.5
MELO3C002642.2 Cucumis melo HOM05D005057 ORTHO05D006570 8.0e-65 251.1 206 67.0
CsaV3_1G033430 Cucumis sativus L. HOM05D005057 ORTHO05D006570 8.0e-65 251.1 206 66.0
Dinv04618 Davidia involucrata HOM05D005057 ORTHO05D006570 1.4e-64 250.4 154 79.9
PSO063G4235 Papaver somniferum HOM05D005057 ORTHO05D006570 3.1e-64 249.2 236 58.1
PSO782G3653 Papaver somniferum HOM05D005057 ORTHO05D006570 3.1e-64 249.2 240 57.5
Thecc.06G172400 Theobroma cacao HOM05D005057 ORTHO05D006570 3.1e-64 249.2 235 59.6
Gohir.D06G136700 Gossypium hirsutum HOM05D005057 ORTHO05D006570 4.0e-64 248.8 239 59.4
FAN07G2484 Fragaria x ananassa HOM05D005057 ORTHO05D006570 5.2e-64 248.4 206 65.0
Gorai.010G158900 Gossypium raimondii HOM05D005057 ORTHO05D006570 5.2e-64 248.4 239 59.4
MD10G1281300 Malus domestica HOM05D005057 ORTHO05D006570 5.2e-64 248.4 194 68.6
Manes.16G037800 Manihot esculenta HOM05D005057 ORTHO05D006570 8.9e-64 247.7 175 72.0
Sc12g0008060 Simmondsia chinensis HOM05D005057 ORTHO05D006570 8.9e-64 247.7 159 77.4
Nn1g09100 Nelumbo nucifera HOM05D005057 ORTHO05D006570 1.2e-63 247.3 138 87.0
RcHm_v2.0_Chr5g0010551 Rosa chinensis HOM05D005057 ORTHO05D006570 1.2e-63 247.3 194 70.1
Aqoxy4G00443 Aquilegia oxysepala HOM05D005057 ORTHO05D006570 3.4e-63 245.7 175 70.3
ATR0602G189 Amborella trichopoda HOM05D005057 ORTHO05D006570 4.4e-63 245.4 175 70.9
Migut.H01447 Erythranthe guttata HOM05D005057 ORTHO05D006570 4.4e-63 245.4 230 60.9
Gohir.A06G130800 Gossypium hirsutum HOM05D005057 ORTHO05D006570 4.4e-63 245.4 238 58.4
Sopen02g021880 Solanum pennellii HOM05D005057 ORTHO05D006570 4.4e-63 245.4 217 61.3
vmacro03932 Vaccinium macrocarpon HOM05D005057 ORTHO05D006570 5.8e-63 245.0 175 71.4
Actinidia16804 Actinidia chinensis HOM05D005057 ORTHO05D006570 7.5e-63 244.6 174 71.3
CDE10G0488 Ceratophyllum demersum HOM05D005057 ORTHO05D006570 7.5e-63 244.6 216 61.6
MBI06_g25988_MAGBIO Magnolia biondii HOM05D005057 ORTHO05D006570 7.5e-63 244.6 182 72.0
Ah.09g233650 Amaranthus hybridus HOM05D005057 ORTHO05D006570 1.3e-62 243.8 174 71.3
EL10Ac8g20510 Beta vulgaris HOM05D005057 ORTHO05D006570 1.3e-62 243.8 174 71.3
Potri.011G065000 Populus trichocarpa HOM05D005057 ORTHO05D006570 1.3e-62 243.8 240 57.5
Sabra11G0046800 Salix brachista HOM05D005057 ORTHO05D006570 1.3e-62 243.8 228 59.2
Atru.chr10.1683 Acer truncatum HOM05D005057 ORTHO05D006570 2.2e-62 243.0 175 69.7
PGR004G2757 Punica granatum HOM05D005057 ORTHO05D006570 2.9e-62 242.7 175 70.3
Cc02_g14710 Coffea canephora HOM05D005057 ORTHO05D006570 3.7e-62 242.3 202 66.3
Eucgr.D00512 Eucalyptus grandis HOM05D005057 ORTHO05D006570 4.9e-62 241.9 241 58.1
GSVIVG01021196001 Vitis vinifera HOM05D005057 ORTHO05D006570 1.9e-61 240.0 230 58.7
MSTRG.13217 Avicennia marina HOM05D005057 ORTHO05D006570 2.4e-61 239.6 230 59.1
Solyc02g076950.2 Solanum lycopersicum HOM05D005057 ORTHO05D006570 2.4e-61 239.6 217 60.4
Zm00001eb162010 Zea mays HOM05D005057 ORTHO05D006570 3.2e-61 239.2 174 68.4
SalBow7G0088 Salvia bowleyana HOM05D005057 ORTHO05D006570 4.1e-61 238.8 244 56.6
Os01g0613900 Oryza sativa ssp. japonica HOM05D005057 ORTHO05D006570 7.0e-61 238.0 138 81.9
SGA_v2.0_scaffold307G48045 Striga asiatica HOM05D005057 ORTHO05D006570 1.2e-60 237.3 258 53.9
Hma1.2p1_0155F.1_g068170 Hydrangea macrophylla HOM05D005057 ORTHO05D006570 1.6e-60 236.9 181 66.9
ECA236G3111 Erigeron canadensis HOM05D005057 ORTHO05D006570 2.7e-60 236.1 240 57.5
Rhsim13G0191300 Rhododendron simsii HOM05D005057 ORTHO05D006570 2.7e-60 236.1 167 71.9
THA.LOC104814250 Tarenaya hassleriana HOM05D005057 ORTHO05D006570 2.7e-60 236.1 206 60.7
TWI38G0714 Tripterygium wilfordii HOM05D005057 ORTHO05D006570 3.5e-60 235.7 243 58.0
DCAR_004016 Daucus carota HOM05D005057 ORTHO05D006570 7.8e-60 234.6 179 70.4
HanXRQChr13g0397391 Helianthus annuus HOM05D005057 ORTHO05D006570 7.8e-60 234.6 226 60.2
Cpa.g.sc7.56 Carica papaya HOM05D005057 ORTHO05D006570 1.0e-59 234.2 174 67.2
Carub.0004s1572 Capsella rubella HOM05D005057 ORTHO05D006570 1.7e-59 233.4 174 67.2
BcaB02g10615 Brassica carinata HOM05D005057 ORTHO05D006570 2.3e-59 233.0 174 67.2
A05p11560 Brassica napus HOM05D005057 ORTHO05D006570 3.0e-59 232.6 174 66.7
C04p15030 Brassica napus HOM05D005057 ORTHO05D006570 3.0e-59 232.6 174 66.7
BraA05t20104Z Brassica rapa HOM05D005057 ORTHO05D006570 3.0e-59 232.6 174 66.7
Thhalv10016658m.g Eutrema salsugineum HOM05D005057 ORTHO05D006570 5.1e-59 231.9 174 67.2
AL4G30000 Arabidopsis lyrata HOM05D005057 ORTHO05D006570 8.6e-59 231.1 174 66.7
AagrBONN_evm.TU.Sc2ySwM_344.2851 Anthoceros agrestis HOM05D005057 ORTHO05D006570 1.1e-58 230.7 160 71.2
Duzib160G0357 Durio zibethinus HOM05D005057 ORTHO05D006570 1.1e-58 230.7 182 67.0
Sp4g16440 Schrenkiella parvula HOM05D005057 ORTHO05D006570 1.1e-58 230.7 237 53.6
Oeu041787.3 Olea europaea HOM05D005057 ORTHO05D006570 1.5e-58 230.3 129 86.8
Aa31LG9G13900 Aethionema arabicum HOM05D005057 ORTHO05D006570 1.9e-58 229.9 174 65.5
Lj2A297G103 Lonicera japonica HOM05D005057 ORTHO05D006570 2.5e-58 229.6 129 86.8
AT2G34090 Arabidopsis thaliana HOM05D005057 ORTHO05D006570 5.6e-58 228.4 174 66.1
CAN.G370.63 Capsicum annuum HOM05D005057 ORTHO05D006570 1.2e-57 227.3 167 70.1
Aqoxy12s001 Aquilegia oxysepala HOM05D005057 ORTHO05D006570 2.8e-57 226.1 187 63.6
AUR62031175 Chenopodium quinoa HOM05D005057 ORTHO05D006570 6.2e-57 224.9 167 69.5
BolC4t23078H Brassica oleracea HOM05D005057 ORTHO05D006570 4.0e-56 222.2 179 64.8
CARHR128190 Cardamine hirsuta HOM05D005057 ORTHO05D006570 4.4e-55 218.8 168 67.3
Mapoly0152s0011 Marchantia polymorpha HOM05D005057 ORTHO05D006570 5.8e-55 218.4 137 76.6
Nitab4.5_0000681g0230 Nicotiana tabacum HOM05D005057 ORTHO05D006570 1.1e-53 214.2 218 56.9
Nitab4.5_0003322g0070 Nicotiana tabacum HOM05D005057 ORTHO05D006570 1.1e-53 214.2 175 64.6
Pp3c16_13000 Physcomitrium patens HOM05D005057 ORTHO05D006570 3.2e-53 212.6 137 75.2
FvH4_4g20380 Fragaria vesca HOM05D005057 ORTHO05D006570 3.0e-51 206.1 117 83.8
SMO142G0032 Selaginella moellendorffii HOM05D005057 ORTHO05D006570 5.6e-50 201.8 167 61.1
PRCOL_00006187 Prasinoderma coloniale HOM05D005057 ORTHO05D006570 2.6e-47 193.0 139 68.3
Cre01.g033700 Chlamydomonas reinhardtii HOM05D005057 ORTHO05D006570 4.4e-47 192.2 139 69.8
MCO11G641 Micromonas commoda HOM05D005057 ORTHO05D006570 1.4e-45 187.2 153 60.8
FAN11G1223 Fragaria x ananassa HOM05D005057 ORTHO05D006570 1.7e-43 180.3 164 64.0
FAN25G1331 Fragaria x ananassa HOM05D005057 ORTHO05D006570 6.6e-43 178.3 164 63.4
Lsat_1_v5_gn_7_23040 Lactuca sativa HOM05D005057 ORTHO05D006570 2.5e-42 176.4 230 48.7
TAR626G0988 Trochodendron aralioides HOM05D005057 ORTHO05D006570 2.5e-42 176.4 150 64.7
MD05G1302500 Malus domestica HOM05D005057 ORTHO05D006570 4.3e-42 175.6 147 64.6
HPP92_020166 Vanilla planifolia HOM05D005057 ORTHO05D006570 2.8e-41 172.9 106 78.3
FAN16G2413 Fragaria x ananassa HOM05D005057 ORTHO05D006570 3.8e-38 162.5 222 49.1
Hund21184 Selenicereus undatus HOM05D005057 ORTHO05D006570 7.1e-37 158.3 94 84.0
BcaC04g22954 Brassica carinata HOM05D005057 ORTHO05D006570 1.9e-34 150.2 125 63.2
C09p55570 Brassica napus HOM05D005057 ORTHO05D006570 1.9e-34 150.2 125 63.2
BolC9t54241H Brassica oleracea HOM05D005057 ORTHO05D006570 1.9e-34 150.2 125 63.2
unitig_22.g6756 Utricularia gibba HOM05D005057 ORTHO05D006570 2.8e-33 146.4 182 50.5
AUR62036592 Chenopodium quinoa HOM05D005057 ORTHO05D006570 2.4e-32 143.3 88 83.0
Glyma.14G170500 Glycine max HOM05D005057 ORTHO05D006570 2.6e-31 139.8 124 62.1
BcaC01g06160 Brassica carinata HOM05D005057 ORTHO05D006570 7.6e-31 138.3 171 50.3
COL.COLO4_25087 Corchorus olitorius HOM05D005057 ORTHO05D006570 1.2e-28 131.0 80 75.0
BolC4t26729H Brassica oleracea HOM05D005057 ORTHO05D006570 5.1e-27 125.6 82 76.8
BolC7t41970H Brassica oleracea HOM05D005057 ORTHO05D006570 1.9e-26 123.6 82 75.6
Hma1.2p1_0155F.1_g068180 Hydrangea macrophylla HOM05D005057 ORTHO05D006570 1.1e-24 117.9 166 44.0
COL.COLO4_31315 Corchorus olitorius HOM05D005057 ORTHO05D006570 1.8e-24 117.1 166 43.4
MD16G1033100 Malus domestica HOM05D005057 ORTHO05D006570 3.9e-19 99.4 62 75.8
BcaC01g03610 Brassica carinata HOM05D005057 ORTHO05D019871 5.7e-10 68.9 73 47.9
HPP92_020183 Vanilla planifolia HOM05D005057 ORTHO05D006570 3.4e-07 59.7 59 47.5


User provided reference genes

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