Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G29848 Trifolium pratense HOM05D007578 ORTHO05D009497 6.5e-61 237.7 164 100.0
Psat0s4627g0160 Pisum sativum HOM05D007578 ORTHO05D009497 1.8e-42 176.4 150 84.7
Ca_24809_v3 Cicer arietinum L. HOM05D007578 ORTHO05D009497 8.9e-42 174.1 150 79.3
Medtr5g018590 Medicago truncatula HOM05D007578 ORTHO05D009497 9.8e-41 170.6 145 82.8
Glyma.11G060900 Glycine max HOM05D007578 ORTHO05D009497 1.3e-29 133.7 160 65.0
Glyma.01G182600 Glycine max HOM05D007578 ORTHO05D009497 1.9e-28 129.8 167 65.3
Lalb_Chr16g0378091 Lupinus albus HOM05D007578 ORTHO05D009497 4.3e-28 128.6 171 62.0
Lalb_Chr16g0378311 Lupinus albus HOM05D007578 ORTHO05D009497 4.3e-28 128.6 171 62.0
Phvul.002G023600 Phaseolus vulgaris HOM05D007578 ORTHO05D009497 5.6e-28 128.3 160 66.9
QL06p044247 Quercus lobata HOM05D007578 ORTHO05D009497 3.1e-26 122.5 153 64.1
Manes.13G132100 Manihot esculenta HOM05D007578 ORTHO05D009497 1.5e-25 120.2 141 73.0
Lj4P136T24 Lonicera japonica HOM05D007578 ORTHO05D009497 7.5e-25 117.9 122 77.0
Cc07_g05400 Coffea canephora HOM05D007578 ORTHO05D009497 9.9e-25 117.5 128 77.3
Thecc.01G045800 Theobroma cacao HOM05D007578 ORTHO05D009497 1.3e-24 117.1 137 68.6
Migut.H00501 Erythranthe guttata HOM05D007578 ORTHO05D009497 8.3e-24 114.4 132 66.7
arahy.Tifrunner.gnm1.ann1.25C3YR Arachis hypogaea HOM05D007578 ORTHO05D009497 2.4e-23 112.8 152 67.8
arahy.Tifrunner.gnm1.ann1.UX6CPD Arachis hypogaea HOM05D007578 ORTHO05D009497 4.1e-23 112.1 152 67.8
MSTRG.23805 Avicennia marina HOM05D007578 ORTHO05D009497 4.1e-23 112.1 127 72.4
Gohir.A02G161500 Gossypium hirsutum HOM05D007578 ORTHO05D009497 9.2e-23 110.9 149 57.7
Hma1.2p1_0261F.1_g104930 Hydrangea macrophylla HOM05D007578 ORTHO05D009497 9.2e-23 110.9 121 72.7
CiPaw.01G029100 Carya illinoinensis HOM05D007578 ORTHO05D009497 2.7e-22 109.4 149 66.4
Nitab4.5_0000108g0140 Nicotiana tabacum HOM05D007578 ORTHO05D009497 3.5e-22 109.0 128 69.5
Haze_15166 Corylus avellana HOM05D007578 ORTHO05D009497 4.6e-22 108.6 141 67.4
Peaxi162Scf00535g00071 Petunia axillaris HOM05D007578 ORTHO05D009497 4.6e-22 108.6 139 62.6
TAR628G0552 Trochodendron aralioides HOM05D007578 ORTHO05D009497 4.6e-22 108.6 140 67.9
CARHR114700 Cardamine hirsuta HOM05D007578 ORTHO05D009497 1.0e-21 107.5 122 72.1
Nitab4.5_0007463g0020 Nicotiana tabacum HOM05D007578 ORTHO05D009497 1.0e-21 107.5 128 69.5
Gorai.003G019400 Gossypium raimondii HOM05D007578 ORTHO05D009497 1.7e-21 106.7 149 58.4
AT2G23670 Arabidopsis thaliana HOM05D007578 ORTHO05D009497 3.0e-21 105.9 129 69.0
Ciclev10026636m.g Citrus clementina HOM05D007578 ORTHO05D009497 3.0e-21 105.9 143 54.5
TAR376G0355 Trochodendron aralioides HOM05D007578 ORTHO05D009497 3.0e-21 105.9 141 66.0
Sabra07G0029900 Salix brachista HOM05D007578 ORTHO05D009497 3.9e-21 105.5 143 63.6
Duzib264G1198 Durio zibethinus HOM05D007578 ORTHO05D009497 5.1e-21 105.1 137 65.0
Sc03g0001220 Simmondsia chinensis HOM05D007578 ORTHO05D009497 6.6e-21 104.8 137 58.4
THA.LOC104804219 Tarenaya hassleriana HOM05D007578 ORTHO05D009497 8.6e-21 104.4 165 61.2
Potri.007G034300 Populus trichocarpa HOM05D007578 ORTHO05D009497 1.1e-20 104.0 143 62.2
Carub.0004s0288 Capsella rubella HOM05D007578 ORTHO05D009497 1.9e-20 103.2 153 59.5
BraA04t17423Z Brassica rapa HOM05D007578 ORTHO05D009497 2.5e-20 102.8 122 71.3
AL4G13660 Arabidopsis lyrata HOM05D007578 ORTHO05D009497 3.3e-20 102.4 157 58.0
A04p18050 Brassica napus HOM05D007578 ORTHO05D009497 3.3e-20 102.4 122 71.3
Aa31LG7G13200 Aethionema arabicum HOM05D007578 ORTHO05D009497 4.3e-20 102.1 155 56.8
CANSAT01G2356 Cannabis sativa HOM05D007578 ORTHO05D009497 4.3e-20 102.1 138 66.7
SGA_v2.0_scaffold15G07205 Striga asiatica HOM05D007578 ORTHO05D009497 4.3e-20 102.1 128 71.9
Duzib147G1180 Durio zibethinus HOM05D007578 ORTHO05D009497 5.6e-20 101.7 127 68.5
Sp4g02640 Schrenkiella parvula HOM05D007578 ORTHO05D009497 7.3e-20 101.3 128 67.2
C04p52990 Brassica napus HOM05D007578 ORTHO05D009497 9.5e-20 100.9 155 61.3
BolC4t26860H Brassica oleracea HOM05D007578 ORTHO05D009497 9.5e-20 100.9 155 61.3
Cpa.g.sc15.63 Carica papaya HOM05D007578 ORTHO05D009497 9.5e-20 100.9 141 63.8
BcaB06g27923 Brassica carinata HOM05D007578 ORTHO05D009497 2.1e-19 99.8 152 59.9
CAN.G836.20 Capsicum annuum HOM05D007578 ORTHO05D009497 3.6e-19 99.0 122 68.9
PGSC0003DMG400037576 Solanum tuberosum HOM05D007578 ORTHO05D009497 4.7e-19 98.6 129 68.2
COL.COLO4_22180 Corchorus olitorius HOM05D007578 ORTHO05D009497 6.2e-19 98.2 144 59.7
CSS0031523 Camellia sinensis var. sinensis HOM05D007578 ORTHO05D009497 1.1e-18 97.4 142 65.5
CSS0032257 Camellia sinensis var. sinensis HOM05D007578 ORTHO05D009497 1.1e-18 97.4 142 65.5
Sed0003773 Sechium edule HOM05D007578 ORTHO05D009497 1.1e-18 97.4 142 63.4
TWI53G0440 Tripterygium wilfordii HOM05D007578 ORTHO05D009497 1.4e-18 97.1 138 65.2
Thhalv10000353m.g Eutrema salsugineum HOM05D007578 ORTHO05D009497 2.4e-18 96.3 160 55.6
Sopen02g034790 Solanum pennellii HOM05D007578 ORTHO05D009497 3.1e-18 95.9 136 64.7
SalBow1G1613 Salvia bowleyana HOM05D007578 ORTHO05D009497 4.0e-18 95.5 120 65.8
Solyc02g090100.1 Solanum lycopersicum HOM05D007578 ORTHO05D009497 4.0e-18 95.5 128 66.4
Gohir.D03G019000 Gossypium hirsutum HOM05D007578 ORTHO05D009497 5.2e-18 95.1 140 57.1
DCAR_010946 Daucus carota HOM05D007578 ORTHO05D009497 8.9e-18 94.4 153 58.8
Gohir.A11G045100 Gossypium hirsutum HOM05D007578 ORTHO05D009497 8.9e-18 94.4 144 60.4
MELO3C020917.2 Cucumis melo HOM05D007578 ORTHO05D009497 3.4e-17 92.4 124 66.1
Gohir.D11G048600 Gossypium hirsutum HOM05D007578 ORTHO05D009497 3.4e-17 92.4 144 59.7
CDE11G1131 Ceratophyllum demersum HOM05D007578 ORTHO05D009497 5.8e-17 91.7 118 61.9
MBI07_g23234_MAGBIO Magnolia biondii HOM05D007578 ORTHO05D009497 9.9e-17 90.9 142 62.7
ClCG02G013060 Citrullus lanatus HOM05D007578 ORTHO05D009497 1.7e-16 90.1 125 67.2
Ah.03g142130 Amaranthus hybridus HOM05D007578 ORTHO05D009497 2.9e-16 89.4 132 64.4
FAN23G2171 Fragaria x ananassa HOM05D007578 ORTHO05D009497 2.9e-16 89.4 124 66.1
FAN26G3047 Fragaria x ananassa HOM05D007578 ORTHO05D009497 3.8e-16 89.0 134 61.9
Gorai.007G052200 Gossypium raimondii HOM05D007578 ORTHO05D009497 3.8e-16 89.0 144 58.3
Lsat_1_v5_gn_3_94000 Lactuca sativa HOM05D007578 ORTHO05D009497 4.9e-16 88.6 117 71.8
Oeu032922.1 Olea europaea HOM05D007578 ORTHO05D009497 4.9e-16 88.6 137 60.6
Actinidia36527 Actinidia chinensis HOM05D007578 ORTHO05D009497 6.4e-16 88.2 135 63.0
CsaV3_2G017140 Cucumis sativus L. HOM05D007578 ORTHO05D009497 6.4e-16 88.2 125 65.6
FvH4_1g14510 Fragaria vesca HOM05D007578 ORTHO05D009497 8.4e-16 87.8 124 65.3
Prupe.7G145300 Prunus persica HOM05D007578 ORTHO05D009497 1.1e-15 87.4 124 65.3
EL10Ac6g14844 Beta vulgaris HOM05D007578 ORTHO05D009497 2.4e-15 86.3 138 59.4
AUR62027241 Chenopodium quinoa HOM05D003724 ORTHO05D009497 5.4e-15 85.1 126 66.7
PGR102G1240 Punica granatum HOM05D007578 ORTHO05D009497 1.2e-14 84.0 128 64.1
Rhsim06G0070400 Rhododendron simsii HOM05D002920 ORTHO05D009497 1.2e-14 84.0 150 56.7
RcHm_v2.0_Chr2g0103251 Rosa chinensis HOM05D007578 ORTHO05D009497 1.6e-14 83.6 131 66.4
Peaxi162Scf00150g00132 Petunia axillaris HOM05D007578 ORTHO05D009497 1.7e-13 80.1 100 74.0
Dinv26776 Davidia involucrata HOM05D007578 ORTHO05D009497 3.9e-13 79.0 97 74.2
FAN28G2485 Fragaria x ananassa HOM05D007578 ORTHO05D009497 3.9e-13 79.0 94 75.5
MD15G1273300 Malus domestica HOM05D007578 ORTHO05D009497 3.9e-13 79.0 146 56.8
FAN19G1163 Fragaria x ananassa HOM05D007578 ORTHO05D009497 5.1e-13 78.6 131 61.1
HanXRQChr12g0378461 Helianthus annuus HOM05D007578 ORTHO05D009497 8.7e-13 77.8 133 42.1
MD02G1158500 Malus domestica HOM05D007578 ORTHO05D009497 8.7e-13 77.8 121 63.6
Dinv39922 Davidia involucrata HOM05D007578 ORTHO05D009497 1.1e-12 77.4 193 47.2
HPP92_014833 Vanilla planifolia HOM05D007578 ORTHO05D009497 4.3e-12 75.5 122 53.3
Atru.chr3.471 Acer truncatum HOM05D007578 ORTHO05D009497 9.6e-12 74.3 129 58.1
Aqoxy2G01906 Aquilegia oxysepala HOM05D007578 ORTHO05D009497 2.1e-11 73.2 130 60.0
PSO170G5738 Papaver somniferum HOM05D007578 ORTHO05D009497 3.6e-11 72.4 126 58.7
ECA246G0471 Erigeron canadensis HOM05D007578 ORTHO05D009497 2.4e-10 69.7 109 61.5
PSO017G5052 Papaver somniferum HOM05D007578 ORTHO05D009497 2.0e-09 66.6 122 58.2
unitig_21.g20937 Utricularia gibba HOM05D000261 ORTHO05D001168 3.4e-09 65.9 128 53.9
ATR0787G067 Amborella trichopoda HOM05D007578 ORTHO05D009497 5.8e-09 65.1 133 43.6
CAN.G1525.2 Capsicum annuum HOM05D007578 ORTHO05D009497 1.3e-08 63.9 121 52.1
SEGI_26721 Sequoiadendron giganteum HOM05D020219 ORTHO05D023531 3.5e-06 55.8 96 61.5


User provided reference genes

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