Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G29773 Trifolium pratense HOM05D006847 ORTHO05D008685 4.3e-181 637.9 322 100.0
Psat4g123400 Pisum sativum HOM05D006847 ORTHO05D008685 1.7e-150 536.2 309 87.4
Ca_22680_v3 Cicer arietinum L. HOM05D006847 ORTHO05D008685 2.0e-146 522.7 309 84.8
Medtr8g065720 Medicago truncatula HOM05D006847 ORTHO05D008685 1.0e-142 510.4 309 83.2
LjContig00408g0014580 Lotus japonicus HOM05D006847 ORTHO05D008685 1.4e-123 446.8 312 73.1
Glyma.02G124600 Glycine max HOM05D006847 ORTHO05D008685 1.1e-120 437.2 310 70.6
arahy.Tifrunner.gnm1.ann1.B51XMH Arachis hypogaea HOM05D006847 ORTHO05D008685 7.9e-119 431.0 309 70.9
arahy.Tifrunner.gnm1.ann1.9XA9EY Arachis hypogaea HOM05D006847 ORTHO05D008685 5.7e-117 424.9 309 70.2
Lj2g0006896 Lotus japonicus HOM05D006847 ORTHO05D008685 1.1e-115 420.6 311 67.8
Ca_05192_v3 Cicer arietinum L. HOM05D006847 ORTHO05D008685 2.5e-112 409.5 310 66.5
Medtr0328s0040 Medicago truncatula HOM05D006847 ORTHO05D008685 3.6e-111 405.6 312 66.0
TPR.G20006 Trifolium pratense HOM05D006847 ORTHO05D008685 4.1e-107 392.1 315 64.1
Gohir.A03G107200 Gossypium hirsutum HOM05D006847 ORTHO05D008685 8.5e-105 384.4 317 62.1
COL.COLO4_27774 Corchorus olitorius HOM05D006847 ORTHO05D008685 1.1e-104 384.0 313 62.6
Potri.008G113000 Populus trichocarpa HOM05D006847 ORTHO05D008685 1.1e-104 384.0 312 62.2
Lj6C772T8 Lonicera japonica HOM05D006847 ORTHO05D008685 7.2e-104 381.3 312 62.2
Gorai.005G148200 Gossypium raimondii HOM05D006847 ORTHO05D008685 9.4e-104 380.9 317 61.2
Duzib268G0361 Durio zibethinus HOM05D006847 ORTHO05D008685 4.7e-103 378.6 314 62.4
SalBow2G2641 Salvia bowleyana HOM05D006847 ORTHO05D008685 6.1e-103 378.3 315 61.9
FAN17G2474 Fragaria x ananassa HOM05D006847 ORTHO05D008685 7.9e-103 377.9 318 60.4
Thecc.02G320200 Theobroma cacao HOM05D006847 ORTHO05D008685 7.9e-103 377.9 314 61.8
TAR622G1172 Trochodendron aralioides HOM05D006847 ORTHO05D008685 1.0e-102 377.5 313 62.3
Dinv33999 Davidia involucrata HOM05D006847 ORTHO05D008685 1.4e-102 377.1 314 62.7
FAN12G2539 Fragaria x ananassa HOM05D006847 ORTHO05D008685 1.8e-102 376.7 318 60.1
RcHm_v2.0_Chr4g0437071 Rosa chinensis HOM05D006847 ORTHO05D008685 3.9e-102 375.6 316 60.1
ClCG05G023430 Citrullus lanatus HOM05D006847 ORTHO05D008685 5.1e-102 375.2 310 62.9
Haze_11844 Corylus avellana HOM05D006847 ORTHO05D008685 6.7e-102 374.8 310 60.6
MD13G1054900 Malus domestica HOM05D006847 ORTHO05D008685 6.7e-102 374.8 313 60.4
FvH4_4g28930 Fragaria vesca HOM05D006847 ORTHO05D008685 1.1e-101 374.0 313 60.1
Atru.chr11.1527 Acer truncatum HOM05D006847 ORTHO05D008685 1.5e-101 373.6 312 62.5
Ciclev10031661m.g Citrus clementina HOM05D006847 ORTHO05D008685 2.0e-101 373.2 312 60.9
Lj3C1026T6 Lonicera japonica HOM05D006847 ORTHO05D008685 2.6e-101 372.9 315 59.7
Manes.14G092000 Manihot esculenta HOM05D006847 ORTHO05D008685 3.3e-101 372.5 314 62.1
Cfa008830 Carpinus fangiana HOM05D006847 ORTHO05D008685 7.4e-101 371.3 311 60.8
Lsat_1_v5_gn_8_36700 Lactuca sativa HOM05D006847 ORTHO05D008685 1.3e-100 370.5 312 59.9
Potri.010G136300 Populus trichocarpa HOM05D006847 ORTHO05D008685 1.3e-100 370.5 312 60.9
GSVIVG01010124001 Vitis vinifera HOM05D006847 ORTHO05D008685 1.3e-100 370.5 315 61.0
Eucgr.G02408 Eucalyptus grandis HOM05D006847 ORTHO05D008685 1.7e-100 370.2 315 58.7
Oeu001640.1 Olea europaea HOM05D006847 ORTHO05D008685 3.7e-100 369.0 316 60.4
MD16G1053800 Malus domestica HOM05D006847 ORTHO05D008685 4.8e-100 368.6 313 59.4
ECA233G1196 Erigeron canadensis HOM05D006847 ORTHO05D008685 1.1e-99 367.5 312 59.6
Cc11_g11380 Coffea canephora HOM05D006847 ORTHO05D008685 2.4e-99 366.3 316 59.2
PGR119G0337 Punica granatum HOM05D006847 ORTHO05D008685 1.2e-98 364.0 324 59.0
MELO3C012175.2 Cucumis melo HOM05D006847 ORTHO05D008685 2.0e-98 363.2 310 62.3
Migut.N00803 Erythranthe guttata HOM05D006847 ORTHO05D008685 2.0e-98 363.2 309 60.5
Nitab4.5_0002309g0040 Nicotiana tabacum HOM05D006847 ORTHO05D008685 2.6e-98 362.8 315 60.0
Aqoxy3G03766 Aquilegia oxysepala HOM05D006847 ORTHO05D008685 3.5e-98 362.5 316 60.1
MSTRG.7721 Avicennia marina HOM05D006847 ORTHO05D008685 4.5e-98 362.1 314 61.8
CSS0010285 Camellia sinensis var. sinensis HOM05D006847 ORTHO05D008685 5.9e-98 361.7 313 59.1
HanXRQChr08g0215061 Helianthus annuus HOM05D006847 ORTHO05D008685 5.9e-98 361.7 310 59.4
Nitab4.5_0000259g0050 Nicotiana tabacum HOM05D006847 ORTHO05D008685 7.7e-98 361.3 315 59.4
CANSAT64G2316 Cannabis sativa HOM05D006847 ORTHO05D008685 1.3e-97 360.5 311 59.2
DCAR_023729 Daucus carota HOM05D006847 ORTHO05D008685 2.9e-97 359.4 318 60.1
CsaV3_5G033580 Cucumis sativus L. HOM05D006847 ORTHO05D008685 3.8e-97 359.0 310 61.0
Migut.L01151 Erythranthe guttata HOM05D006847 ORTHO05D008685 3.8e-97 359.0 311 60.1
Actinidia24040 Actinidia chinensis HOM05D006847 ORTHO05D008685 8.5e-97 357.8 311 59.2
Sopen01g032850 Solanum pennellii HOM05D006847 ORTHO05D008685 1.5e-96 357.1 314 58.6
Sed0007808 Sechium edule HOM05D006847 ORTHO05D008685 2.5e-96 356.3 310 59.7
CAN.G869.31 Capsicum annuum HOM05D006847 ORTHO05D008685 3.2e-96 355.9 317 58.0
CiPaw.06G095800 Carya illinoinensis HOM05D006847 ORTHO05D008685 5.5e-96 355.1 312 58.0
TAR374G0132 Trochodendron aralioides HOM05D006847 ORTHO05D008685 2.1e-95 353.2 318 59.4
PGSC0003DMG400001803 Solanum tuberosum HOM05D006847 ORTHO05D008685 3.6e-95 352.4 314 58.6
Gohir.D02G132300 Gossypium hirsutum HOM05D006847 ORTHO05D008685 6.1e-95 351.7 316 57.6
Sed0008138 Sechium edule HOM05D006847 ORTHO05D008685 8.0e-95 351.3 310 57.7
Sopen05g006440 Solanum pennellii HOM05D006847 ORTHO05D008685 1.4e-94 350.5 311 57.9
PGSC0003DMG400019650 Solanum tuberosum HOM05D006847 ORTHO05D008685 3.0e-94 349.4 313 58.1
TWI75G1304 Tripterygium wilfordii HOM05D006847 ORTHO05D008685 5.2e-94 348.6 314 58.3
MBI14_g08222_MAGBIO Magnolia biondii HOM05D006847 ORTHO05D008685 1.5e-93 347.1 313 56.9
Hma1.2p1_1348F.1_g277280 Hydrangea macrophylla HOM05D006847 ORTHO05D008685 3.1e-91 339.3 303 59.1
Oeu021813.1 Olea europaea HOM05D006847 ORTHO05D008685 4.5e-90 335.5 310 56.5
FAN22G0943 Fragaria x ananassa HOM05D006847 ORTHO05D008685 5.5e-88 328.6 318 55.0
ATR0691G250 Amborella trichopoda HOM05D006847 ORTHO05D008685 1.8e-83 313.5 314 52.2
Aqoxy3G00572 Aquilegia oxysepala HOM05D006847 ORTHO05D008685 5.0e-81 305.4 320 53.8
Peaxi162Scf00188g00923 Petunia axillaris HOM05D006847 ORTHO05D008685 4.7e-79 298.9 280 57.1
HPP92_020537 Vanilla planifolia HOM05D006847 ORTHO05D008685 2.0e-77 293.5 318 46.9
Psat2g097480 Pisum sativum HOM05D006847 ORTHO05D008685 1.4e-75 287.3 266 59.4
CSS0031083 Camellia sinensis var. sinensis HOM05D006847 ORTHO05D008685 1.0e-62 244.6 308 44.5
AagrBONN_evm.TU.Sc2ySwM_368.2780 Anthoceros agrestis HOM05D006847 ORTHO05D008685 6.8e-62 241.9 313 41.5
CSS0029748 Camellia sinensis var. sinensis HOM05D006847 ORTHO05D008685 1.3e-60 237.7 256 53.5
HPP92_020469 Vanilla planifolia HOM05D006847 ORTHO05D008685 3.7e-60 236.1 312 40.7
Pp3c5_12950 Physcomitrium patens HOM05D006847 ORTHO05D008685 1.1e-59 234.6 333 39.9
Mapoly0024s0128 Marchantia polymorpha HOM05D006847 ORTHO05D008685 1.4e-59 234.2 332 39.8
Pp3c6_17060 Physcomitrium patens HOM05D006847 ORTHO05D008685 5.4e-59 232.3 334 38.3
Actinidia19898 Actinidia chinensis HOM05D006847 ORTHO05D008685 3.9e-57 226.1 151 68.9
Actinidia31921 Actinidia chinensis HOM05D006847 ORTHO05D008685 3.9e-57 226.1 151 69.5
ATR0691G163 Amborella trichopoda HOM05D006847 ORTHO05D008685 1.1e-56 224.6 234 51.7
SEGI_24845 Sequoiadendron giganteum HOM05D006847 ORTHO05D008685 5.6e-56 222.2 282 44.7
HPP92_026164 Vanilla planifolia HOM05D006847 ORTHO05D008685 1.5e-53 214.2 290 40.0
Pp3c27_4530 Physcomitrium patens HOM05D006847 ORTHO05D008685 6.4e-52 208.8 354 34.7
Pp3c4_7760 Physcomitrium patens HOM05D006847 ORTHO05D008685 7.3e-48 195.3 351 35.0
Pp3c3_23290 Physcomitrium patens HOM05D006847 ORTHO05D008685 1.1e-46 191.4 362 33.7
Solyc05g010640.3 Solanum lycopersicum HOM05D006847 ORTHO05D008685 2.0e-45 187.2 213 48.8
Nn4g23574 Nelumbo nucifera HOM05D006847 ORTHO05D008685 9.9e-37 158.3 126 63.5
CSS0043445 Camellia sinensis var. sinensis HOM05D006847 ORTHO05D000152 1.2e-29 134.8 126 52.4
arahy.Tifrunner.gnm1.ann1.UQ0TL8 Arachis hypogaea HOM05D006847 ORTHO05D008685 3.5e-26 123.2 112 57.1
Sabra10G0104800 Salix brachista HOM05D006847 ORTHO05D008685 6.2e-23 112.5 101 59.4
Nn4g23575 Nelumbo nucifera HOM05D006847 ORTHO05D008685 1.7e-20 104.4 57 75.4
AagrBONN_evm.TU.Sc2ySwM_117.3730 Anthoceros agrestis HOM05D006847 ORTHO05D008685 7.1e-19 99.0 239 28.5
SMO198G0052 Selaginella moellendorffii HOM05D006847 ORTHO05D008685 1.9e-16 90.9 59 62.7
Sabra10G0104900 Salix brachista HOM05D006847 ORTHO05D008685 2.5e-16 90.5 121 43.0
SMO143G0243 Selaginella moellendorffii HOM05D006847 ORTHO05D008685 6.2e-15 85.9 121 38.8
Solyc01g081280.3 Solanum lycopersicum HOM05D006847 ORTHO05D008685 1.1e-14 85.1 52 73.1
Actinidia31922 Actinidia chinensis HOM05D006847 ORTHO05D008685 6.9e-14 82.4 51 70.6
CAN.G992.5 Capsicum annuum HOM05D006847 ORTHO05D008685 9.0e-14 82.0 180 35.0
SMO143G0192 Selaginella moellendorffii HOM05D006847 ORTHO05D008685 1.5e-13 81.3 121 36.4
SMO186G0008 Selaginella moellendorffii HOM05D006847 ORTHO05D008685 3.8e-12 76.6 121 35.5
arahy.Tifrunner.gnm1.ann1.JA47JZ Arachis hypogaea HOM05D006847 ORTHO05D008685 3.2e-11 73.6 36 88.9
SMO265G0021 Selaginella moellendorffii HOM05D006847 ORTHO05D008685 5.5e-11 72.8 121 35.5
Medtr8g069545 Medicago truncatula HOM05D006847 ORTHO05D008685 2.1e-10 70.9 34 94.1
Cre06.g263550 Chlamydomonas reinhardtii HOM05D006847 ORTHO05D008685 1.5e-08 64.7 78 42.3
Cpa.g.c44692 Carica papaya HOM05D006847 ORTHO05D008685 3.3e-08 63.5 34 76.5
Psat2g097440 Pisum sativum HOM05D006847 ORTHO05D008685 3.7e-07 60.1 34 76.5


User provided reference genes

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