Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G29735 Trifolium pratense HOM05D000448 ORTHO05D000291 1.5e-104 383.3 250 100.0
TPR.G7558 Trifolium pratense HOM05D000448 ORTHO05D000291 9.2e-91 337.4 278 84.2
TPR.G473 Trifolium pratense HOM05D000448 ORTHO05D000291 2.8e-39 166.4 126 74.6
Lj1g0011572 Lotus japonicus HOM05D000448 ORTHO05D000291 4.8e-31 139.0 254 54.3
Phvul.007G156400 Phaseolus vulgaris HOM05D000448 ORTHO05D000291 2.4e-30 136.7 280 49.6
VMungo1383G3639 Vigna mungo HOM05D000448 ORTHO05D000291 3.5e-29 132.9 281 47.7
TPR.G7565 Trifolium pratense HOM05D000448 ORTHO05D000291 8.0e-26 121.7 273 50.5
Psat3g049960 Pisum sativum HOM05D000448 ORTHO05D012127 6.7e-25 118.6 129 55.0
arahy.Tifrunner.gnm1.ann1.FECP0X Arachis hypogaea HOM05D000448 ORTHO05D000291 1.2e-24 117.9 287 36.9
Lalb_Chr25g0289651 Lupinus albus HOM05D000448 ORTHO05D000291 1.3e-23 114.4 276 46.4
Cfa007125 Carpinus fangiana HOM05D000448 ORTHO05D000291 3.1e-22 109.8 271 47.6
Glyma.03G170400 Glycine max HOM05D000448 ORTHO05D000291 3.5e-21 106.3 269 48.7
Cfa018491 Carpinus fangiana HOM05D000448 ORTHO05D000291 5.0e-20 102.4 246 50.4
Medtr7g099580 Medicago truncatula HOM05D000448 ORTHO05D000313 2.5e-19 100.1 166 36.1
CiPaw.04G072700 Carya illinoinensis HOM05D000448 ORTHO05D000291 4.2e-19 99.4 291 45.4
Cfa019709 Carpinus fangiana HOM05D000448 ORTHO05D000291 9.4e-19 98.2 268 47.8
TPR.G7562 Trifolium pratense HOM05D000448 ORTHO05D000291 9.4e-19 98.2 280 45.7
Glyma.13G130300 Glycine max HOM05D000448 ORTHO05D000291 2.1e-18 97.1 284 41.5
Medtr1g069110 Medicago truncatula HOM05D000448 ORTHO05D000291 8.0e-18 95.1 254 46.1
arahy.Tifrunner.gnm1.ann1.27XKAM Arachis hypogaea HOM05D000448 ORTHO05D000291 1.4e-17 94.4 165 61.8
arahy.Tifrunner.gnm1.ann1.9J7SPP Arachis hypogaea HOM05D000448 ORTHO05D000291 2.3e-17 93.6 165 61.8
Glyma.19G171500 Glycine max HOM05D000448 ORTHO05D000291 2.3e-17 93.6 161 65.2
arahy.Tifrunner.gnm1.ann1.9NB33V Arachis hypogaea HOM05D000448 ORTHO05D000291 5.2e-17 92.4 246 31.3
Glyma.03G170501 Glycine max HOM05D000448 ORTHO05D000291 8.8e-17 91.7 163 63.2
Medtr7g099570 Medicago truncatula HOM05D000448 ORTHO05D000291 8.8e-17 91.7 290 44.1
Cfa019724 Carpinus fangiana HOM05D000448 ORTHO05D000291 5.7e-16 89.0 270 45.9
Medtr7g099560 Medicago truncatula HOM05D000448 ORTHO05D000291 2.2e-15 87.0 74 64.9
RcHm_v2.0_Chr1g0341001 Rosa chinensis HOM05D000448 ORTHO05D000291 3.7e-15 86.3 255 45.5
VMungo1383G2601 Vigna mungo HOM05D000448 ORTHO05D000291 6.3e-15 85.5 273 44.7
CiPaw.03G111600 Carya illinoinensis HOM05D000448 ORTHO05D000291 1.1e-14 84.7 293 43.7
CiPaw.03G112000 Carya illinoinensis HOM05D000448 ORTHO05D000291 1.8e-14 84.0 275 45.1
CiPaw.03G110600 Carya illinoinensis HOM05D000448 ORTHO05D000291 3.1e-14 83.2 293 43.7
FAN06G0545 Fragaria x ananassa HOM05D000448 ORTHO05D000291 5.4e-14 82.4 222 52.7
CiPaw.03G112300 Carya illinoinensis HOM05D000448 ORTHO05D000291 2.7e-13 80.1 275 44.4
Haze_18731 Corylus avellana HOM05D000448 ORTHO05D000291 1.3e-12 77.8 161 60.2
RcHm_v2.0_Chr3g0490431 Rosa chinensis HOM05D000448 ORTHO05D000291 3.8e-12 76.3 256 45.7
PGR142G0312 Punica granatum HOM05D000448 ORTHO05D000291 5.0e-12 75.9 253 36.8
Haze_18758 Corylus avellana HOM05D000448 ORTHO05D000291 8.6e-12 75.1 164 57.9
Lsat_1_v5_gn_5_30860 Lactuca sativa HOM05D000448 ORTHO05D000291 8.6e-12 75.1 237 35.9
vmacro20892 Vaccinium macrocarpon HOM05D000448 ORTHO05D000291 1.9e-11 73.9 271 42.4
HanXRQChr16g0523061 Helianthus annuus HOM05D000448 ORTHO05D000291 2.5e-11 73.6 237 32.1
Medtr7g099550 Medicago truncatula HOM05D000448 ORTHO05D000291 3.2e-11 73.2 97 57.7
Haze_18770 Corylus avellana HOM05D000448 ORTHO05D000291 7.2e-11 72.0 211 52.1
AUR62001506 Chenopodium quinoa HOM05D000448 ORTHO05D000291 2.1e-10 70.5 276 38.8
Haze_18756 Corylus avellana HOM05D000448 ORTHO05D000291 4.7e-10 69.3 152 61.8
HanXRQChr16g0523041 Helianthus annuus HOM05D000448 ORTHO05D000291 4.7e-10 69.3 248 30.2
vmacro17436 Vaccinium macrocarpon HOM05D000448 ORTHO05D000291 8.0e-10 68.6 285 24.6
ECA248G1701 Erigeron canadensis HOM05D000448 ORTHO05D000291 1.8e-09 67.4 241 30.3
Lsat_1_v5_gn_5_31161 Lactuca sativa HOM05D000448 ORTHO05D000291 1.8e-09 67.4 242 34.7
CSS0043523 Camellia sinensis var. sinensis HOM05D000448 ORTHO05D000291 2.3e-09 67.0 244 45.5
Ah.08g216580 Amaranthus hybridus HOM05D000448 ORTHO05D000291 3.0e-09 66.6 278 38.1
Haze_18775 Corylus avellana HOM05D000448 ORTHO05D000291 3.0e-09 66.6 157 60.5
AUR62001505 Chenopodium quinoa HOM05D000448 ORTHO05D000291 6.8e-09 65.5 273 38.8
Haze_01926 Corylus avellana HOM05D000448 ORTHO05D000291 1.2e-08 64.7 75 40.0
CSS0023638 Camellia sinensis var. sinensis HOM05D000448 ORTHO05D000291 2.0e-08 63.9 265 26.0
Haze_09282 Corylus avellana HOM05D000448 ORTHO05D000291 2.0e-08 63.9 156 39.7
Cfa019118 Carpinus fangiana HOM05D000448 ORTHO05D000291 2.6e-08 63.5 248 45.6
PSO384G2515 Papaver somniferum HOM05D000448 ORTHO05D000291 2.6e-08 63.5 288 38.9
Duzib235G1327 Durio zibethinus HOM05D000448 ORTHO05D000291 3.4e-08 63.2 249 32.9
PGR142G2131 Punica granatum HOM05D000448 ORTHO05D000291 3.4e-08 63.2 254 43.7
Duzib192G1008 Durio zibethinus HOM05D000448 ORTHO05D000291 4.4e-08 62.8 244 44.7
FvH4_7g06240 Fragaria vesca HOM05D000448 ORTHO05D000291 4.4e-08 62.8 71 46.5
QL05p009005 Quercus lobata HOM05D000448 ORTHO05D000291 4.4e-08 62.8 281 39.5
Ciclev10027103m.g Citrus clementina HOM05D000448 ORTHO05D000291 5.7e-08 62.4 226 31.4
HanXRQChr02g0058091 Helianthus annuus HOM05D000448 ORTHO05D000291 5.7e-08 62.4 273 28.2
GSVIVG01015127001 Vitis vinifera HOM05D006721 ORTHO05D000476 1.3e-07 61.2 72 40.3
Psat6g065480 Pisum sativum HOM05D000448 ORTHO05D000291 2.2e-07 60.5 122 34.4
PSO781G0012 Papaver somniferum HOM05D000448 ORTHO05D000291 2.8e-07 60.1 289 38.8
PGR142G2248 Punica granatum HOM05D000448 ORTHO05D000291 2.8e-07 60.1 252 44.0
PGR142G4393 Punica granatum HOM05D000448 ORTHO05D000291 2.8e-07 60.1 174 53.4
Haze_18772 Corylus avellana HOM05D000448 ORTHO05D000291 3.7e-07 59.7 72 43.1
Cfa013308 Carpinus fangiana HOM05D000448 ORTHO05D000291 4.9e-07 59.3 77 37.7
Rhsim07G0188200 Rhododendron simsii HOM05D000448 ORTHO05D000291 4.9e-07 59.3 241 46.5
EL10Ac7g16388 Beta vulgaris HOM05D000448 ORTHO05D000291 6.3e-07 58.9 275 39.3
CiPaw.03G111300 Carya illinoinensis HOM05D000448 ORTHO05D000291 6.3e-07 58.9 255 44.3
PGR083G2444 Punica granatum HOM05D000448 ORTHO05D000291 6.3e-07 58.9 167 53.9
VMungo1127G0734 Vigna mungo HOM05D000448 ORTHO05D000291 6.3e-07 58.9 71 40.8
Actinidia38446 Actinidia chinensis HOM05D000448 ORTHO05D000291 1.1e-06 58.2 70 40.0
CiPaw.03G111800 Carya illinoinensis HOM05D000448 ORTHO05D000291 1.1e-06 58.2 123 35.0
Lsat_1_v5_gn_5_29501 Lactuca sativa HOM05D000448 ORTHO05D000291 1.1e-06 58.2 279 31.5
Duzib192G0934 Durio zibethinus HOM05D000448 ORTHO05D000291 1.4e-06 57.8 250 43.2
Glyma.10G042950 Glycine max HOM05D000448 ORTHO05D000291 1.4e-06 57.8 111 37.8
PGR142G2718 Punica granatum HOM05D000448 ORTHO05D000291 1.4e-06 57.8 162 56.2
QL05p009022 Quercus lobata HOM05D000448 ORTHO05D000291 1.4e-06 57.8 129 31.0
Cfa019708 Carpinus fangiana HOM05D000448 ORTHO05D000291 1.8e-06 57.4 74 41.9
COL.COLO4_30802 Corchorus olitorius HOM05D000448 ORTHO05D000291 1.8e-06 57.4 76 39.5
CAN.G68.15 Capsicum annuum HOM05D000448 ORTHO05D000291 2.4e-06 57.0 71 40.8
Dinv37881 Davidia involucrata HOM05D000448 ORTHO05D000291 2.4e-06 57.0 70 42.9
Hund18696 Selenicereus undatus HOM05D000448 ORTHO05D000291 3.1e-06 56.6 263 34.6
Sc10g0008820 Simmondsia chinensis HOM05D000448 ORTHO05D000291 3.1e-06 56.6 159 52.2
COL.COLO4_30724 Corchorus olitorius HOM05D000448 ORTHO05D000291 4.1e-06 56.2 262 42.4
Haze_18776 Corylus avellana HOM05D000448 ORTHO05D000291 5.4e-06 55.8 74 39.2
CSS0038637 Camellia sinensis var. sinensis HOM05D000448 ORTHO05D000291 7.0e-06 55.5 251 42.2
MELO3C013066.2 Cucumis melo HOM05D000448 ORTHO05D000291 7.0e-06 55.5 201 25.4
CAN.G712.1 Capsicum annuum HOM05D000448 ORTHO05D000291 9.2e-06 55.1 71 39.4


User provided reference genes

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