Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G29580 Trifolium pratense HOM05D006392 ORTHO05D008010 2.0e-67 258.8 119 100.0
Medtr2g029040 Medicago truncatula HOM05D006392 ORTHO05D008010 1.6e-56 222.6 123 86.2
Psat1g169520 Pisum sativum HOM05D006392 ORTHO05D008010 2.5e-54 215.3 120 82.5
Ca_00791_v3 Cicer arietinum L. HOM05D006392 ORTHO05D008010 4.3e-54 214.5 119 82.4
Ca_07152_v3 Cicer arietinum L. HOM05D006392 ORTHO05D008010 1.9e-49 199.1 119 77.3
Phvul.005G022200 Phaseolus vulgaris HOM05D006392 ORTHO05D008010 2.8e-45 185.3 119 71.4
Glyma.09G103100 Glycine max HOM05D006392 ORTHO05D008010 4.0e-44 181.4 117 72.6
Lalb_Chr20g0119891 Lupinus albus HOM05D006392 ORTHO05D008010 2.6e-43 178.7 119 65.5
Lj6g0002207 Lotus japonicus HOM05D006392 ORTHO05D008010 2.4e-41 172.2 120 68.3
VMungo1080G0965 Vigna mungo HOM05D006392 ORTHO05D008010 5.3e-36 154.5 92 75.0
arahy.Tifrunner.gnm1.ann1.GAE5DS Arachis hypogaea HOM05D006392 ORTHO05D008010 9.3e-33 143.7 91 71.4
CiPaw.07G149200 Carya illinoinensis HOM05D006392 ORTHO05D008010 1.2e-32 143.3 115 55.7
arahy.Tifrunner.gnm1.ann1.8AJY4P Arachis hypogaea HOM05D006392 ORTHO05D008010 4.6e-32 141.4 91 71.4
GSVIVG01009916001 Vitis vinifera HOM05D006392 ORTHO05D008010 4.6e-32 141.4 116 59.5
Lj4C23T1 Lonicera japonica HOM05D006392 ORTHO05D008010 1.0e-31 140.2 112 57.1
DCAR_023015 Daucus carota HOM05D006392 ORTHO05D008010 3.0e-31 138.7 112 57.1
Rhsim06G0021200 Rhododendron simsii HOM05D006392 ORTHO05D008010 3.9e-31 138.3 112 58.9
TWI56G0581 Tripterygium wilfordii HOM05D006392 ORTHO05D008010 3.9e-31 138.3 119 56.3
PGR083G2660 Punica granatum HOM05D006392 ORTHO05D008010 6.7e-31 137.5 114 54.4
CANSAT25G2040 Cannabis sativa HOM05D006392 ORTHO05D008010 8.7e-31 137.1 118 55.9
Haze_22639 Corylus avellana HOM05D006392 ORTHO05D008010 8.7e-31 137.1 111 57.7
Gohir.A01G111000 Gossypium hirsutum HOM05D006392 ORTHO05D008010 8.7e-31 137.1 116 55.2
Oeu014179.1 Olea europaea HOM05D006392 ORTHO05D008010 8.7e-31 137.1 112 55.4
Cfa013957 Carpinus fangiana HOM05D006392 ORTHO05D008010 1.1e-30 136.7 111 57.7
CsaV3_3G045910 Cucumis sativus L. HOM05D006392 ORTHO05D008010 1.1e-30 136.7 118 49.2
QL02p011683 Quercus lobata HOM05D006392 ORTHO05D008010 1.5e-30 136.3 118 55.9
Hma1.2p1_0638F.1_g193900 Hydrangea macrophylla HOM05D006392 ORTHO05D008010 1.9e-30 136.0 112 58.0
Hma1.2p1_0638F.1_g193910 Hydrangea macrophylla HOM05D006392 ORTHO05D008010 1.9e-30 136.0 112 58.0
Manes.05G146900 Manihot esculenta HOM05D006392 ORTHO05D008010 2.5e-30 135.6 116 53.4
Actinidia16990 Actinidia chinensis HOM05D006392 ORTHO05D004187 3.3e-30 135.2 112 55.4
Lsat_1_v5_gn_8_30701 Lactuca sativa HOM05D006392 ORTHO05D008010 4.3e-30 134.8 114 55.3
CSS0006206 Camellia sinensis var. sinensis HOM05D006392 ORTHO05D008010 5.7e-30 134.4 110 57.3
CSS0012189 Camellia sinensis var. sinensis HOM05D006392 ORTHO05D008010 5.7e-30 134.4 110 57.3
Gohir.D01G097700 Gossypium hirsutum HOM05D006392 ORTHO05D008010 7.4e-30 134.0 116 54.3
Gorai.002G123300 Gossypium raimondii HOM05D006392 ORTHO05D008010 7.4e-30 134.0 116 54.3
Aqoxy6G00284_Aqoxy6G00285 Aquilegia oxysepala HOM05D006392 ORTHO05D008010 9.6e-30 133.7 119 52.9
AUR62041903 Chenopodium quinoa HOM05D006392 ORTHO05D008010 1.3e-29 133.3 113 61.1
Eucgr.F01664 Eucalyptus grandis HOM05D006392 ORTHO05D008010 1.3e-29 133.3 116 56.0
Sed0018359 Sechium edule HOM05D006392 ORTHO05D008010 1.3e-29 133.3 117 48.7
Eucgr.F02661 Eucalyptus grandis HOM05D006392 ORTHO05D008010 1.6e-29 132.9 116 56.0
vmacro07583 Vaccinium macrocarpon HOM05D006392 ORTHO05D008010 1.6e-29 132.9 116 57.8
AUR62033899 Chenopodium quinoa HOM05D006392 ORTHO05D008010 2.1e-29 132.5 113 60.2
MD15G1011700 Malus domestica HOM05D006392 ORTHO05D008010 2.1e-29 132.5 118 53.4
HanXRQChr13g0387101 Helianthus annuus HOM05D006392 ORTHO05D008010 3.7e-29 131.7 114 57.0
Actinidia21265 Actinidia chinensis HOM05D006392 ORTHO05D008010 4.8e-29 131.3 110 55.5
Nn1g05904 Nelumbo nucifera HOM05D006392 ORTHO05D008010 4.8e-29 131.3 121 52.9
Ciclev10001496m.g Citrus clementina HOM05D006392 ORTHO05D008010 6.2e-29 131.0 113 55.8
Prupe.1G364700 Prunus persica HOM05D006392 ORTHO05D008010 6.2e-29 131.0 117 54.7
Cpa.g.sc26.51 Carica papaya HOM05D006392 ORTHO05D008010 8.2e-29 130.6 117 53.8
Hund05186 Selenicereus undatus HOM05D006392 ORTHO05D008010 8.2e-29 130.6 118 53.4
Duzib116G0836 Durio zibethinus HOM05D006392 ORTHO05D008010 1.8e-28 129.4 117 54.7
Thecc.08G045200 Theobroma cacao HOM05D006392 ORTHO05D008010 1.8e-28 129.4 118 53.4
Dinv31849 Davidia involucrata HOM05D006392 ORTHO05D008010 3.1e-28 128.6 110 56.4
unitig_32.g11136 Utricularia gibba HOM05D006392 ORTHO05D008010 5.3e-28 127.9 111 57.7
Ah.11g039750 Amaranthus hybridus HOM05D006392 ORTHO05D008010 6.9e-28 127.5 113 57.5
RcHm_v2.0_Chr6g0302911 Rosa chinensis HOM05D006392 ORTHO05D008010 6.9e-28 127.5 115 53.0
ECA233G3412 Erigeron canadensis HOM05D006392 ORTHO05D008010 9.0e-28 127.1 114 53.5
Migut.C00843 Erythranthe guttata HOM05D006392 ORTHO05D008010 9.0e-28 127.1 111 54.1
MBI05_g07507_MAGBIO Magnolia biondii HOM05D006392 ORTHO05D008010 9.0e-28 127.1 120 53.3
Atru.chr13.285 Acer truncatum HOM05D006392 ORTHO05D008010 1.2e-27 126.7 120 51.7
Potri.005G240000 Populus trichocarpa HOM05D006392 ORTHO05D008010 1.5e-27 126.3 113 52.2
TWI36G0533 Tripterygium wilfordii HOM05D006392 ORTHO05D008010 2.0e-27 125.9 114 54.4
EL10Ac1g02188 Beta vulgaris HOM05D006392 ORTHO05D008010 2.6e-27 125.6 113 54.0
MD08G1012700 Malus domestica HOM05D006392 ORTHO05D008010 2.6e-27 125.6 118 50.8
PSO675G2043 Papaver somniferum HOM05D006392 ORTHO05D008010 2.6e-27 125.6 113 55.8
TAR628G0005 Trochodendron aralioides HOM05D006392 ORTHO05D008010 3.4e-27 125.2 116 54.3
Potri.002G021700 Populus trichocarpa HOM05D006392 ORTHO05D008010 4.5e-27 124.8 112 51.8
Sabra02G0018100 Salix brachista HOM05D006392 ORTHO05D008010 4.5e-27 124.8 116 50.0
COL.COLO4_26140 Corchorus olitorius HOM05D006392 ORTHO05D008010 5.8e-27 124.4 119 53.8
SGA_v2.0_scaffold11G05922 Striga asiatica HOM05D006392 ORTHO05D008010 5.8e-27 124.4 111 54.1
MSTRG.1188 Avicennia marina HOM05D006392 ORTHO05D008010 7.6e-27 124.0 109 56.0
FAN20G2474 Fragaria x ananassa HOM05D006392 ORTHO05D008010 1.0e-26 123.6 115 51.3
FAN27G1073 Fragaria x ananassa HOM05D006392 ORTHO05D008010 1.0e-26 123.6 115 51.3
PSO541G2958 Papaver somniferum HOM05D006392 ORTHO05D008010 1.3e-26 123.2 113 54.9
Sc02g0008600 Simmondsia chinensis HOM05D006392 ORTHO05D008010 1.3e-26 123.2 120 50.8
FAN15G0959 Fragaria x ananassa HOM05D006392 ORTHO05D008010 2.2e-26 122.5 115 50.4
FvH4_2g38390 Fragaria vesca HOM05D006392 ORTHO05D008010 3.8e-26 121.7 115 50.4
THA.LOC104809190 Tarenaya hassleriana HOM05D006392 ORTHO05D008010 3.8e-26 121.7 117 50.4
Nitab4.5_0013390g0010 Nicotiana tabacum HOM05D006392 ORTHO05D008010 5.0e-26 121.3 112 47.3
Cc10_g01620 Coffea canephora HOM05D006392 ORTHO05D008010 8.4e-26 120.6 112 48.2
Duzib093G0848 Durio zibethinus HOM05D006392 ORTHO05D008010 1.4e-25 119.8 115 50.4
Sp7g07860 Schrenkiella parvula HOM05D006392 ORTHO05D008010 1.9e-25 119.4 117 51.3
Sabra05G0185500 Salix brachista HOM05D006392 ORTHO05D008010 2.5e-25 119.0 109 52.3
ATR0810G120 Amborella trichopoda HOM05D006392 ORTHO05D008010 4.2e-25 118.2 112 52.7
PGSC0003DMG400009939 Solanum tuberosum HOM05D006392 ORTHO05D008010 4.2e-25 118.2 110 50.0
Solyc04g081500.3 Solanum lycopersicum HOM05D006392 ORTHO05D008010 7.2e-25 117.5 110 49.1
Sopen04g035110 Solanum pennellii HOM05D006392 ORTHO05D008010 7.2e-25 117.5 110 49.1
CAN.G311.35 Capsicum annuum HOM05D006392 ORTHO05D008010 2.7e-24 115.5 110 48.2
CDE04G0374 Ceratophyllum demersum HOM05D006392 ORTHO05D008010 4.6e-24 114.8 114 50.0
A06p48320 Brassica napus HOM05D006392 ORTHO05D008010 6.1e-24 114.4 114 48.2
BraA06t27702Z Brassica rapa HOM05D006392 ORTHO05D008010 6.1e-24 114.4 114 48.2
BcaC02g10765 Brassica carinata HOM05D006392 ORTHO05D008010 7.9e-24 114.0 114 47.4
C04p25370 Brassica napus HOM05D006392 ORTHO05D008010 7.9e-24 114.0 114 47.4
BolC4t24044H Brassica oleracea HOM05D006392 ORTHO05D008010 7.9e-24 114.0 114 47.4
AL8G18870 Arabidopsis lyrata HOM05D006392 ORTHO05D008010 6.7e-23 110.9 116 45.7
SalBow7G2189 Salvia bowleyana HOM05D006392 ORTHO05D008010 6.7e-23 110.9 119 47.9
BcaC06g31757 Brassica carinata HOM05D006392 ORTHO05D008010 1.1e-22 110.2 114 46.5
Thhalv10003229m.g Eutrema salsugineum HOM05D006392 ORTHO05D008010 1.1e-22 110.2 117 47.9
SEGI_16132 Sequoiadendron giganteum HOM05D006392 ORTHO05D008010 1.1e-22 110.2 110 45.5
Carub.0008s0658 Capsella rubella HOM05D006392 ORTHO05D008010 1.5e-22 109.8 117 47.9
AT5G42470 Arabidopsis thaliana HOM05D006392 ORTHO05D008010 2.5e-22 109.0 119 47.1
HPP92_024091 Vanilla planifolia HOM05D006392 ORTHO05D008010 2.5e-22 109.0 115 47.8
Zm00001eb228060 Zea mays HOM05D006392 ORTHO05D008010 4.8e-21 104.8 117 43.6
Os06g0715600 Oryza sativa ssp. japonica HOM05D006392 ORTHO05D008010 2.6e-19 99.0 119 40.3
Pp3c4_9730 Physcomitrium patens HOM05D006392 ORTHO05D008010 2.9e-18 95.5 114 39.5
RcHm_v2.0_Chr4g0398171 Rosa chinensis HOM05D006392 ORTHO05D008010 3.2e-17 92.0 78 53.8
Aa31LG9G12590 Aethionema arabicum HOM05D006392 ORTHO05D008010 4.2e-17 91.7 93 48.4
AagrBONN_evm.TU.Sc2ySwM_117.3435 Anthoceros agrestis HOM05D006392 ORTHO05D008010 4.3e-14 81.6 105 41.0
MELO3C030484.2 Cucumis melo HOM05D006392 ORTHO05D008010 5.7e-14 81.3 132 35.6
Peaxi162Scf00438g00835 Petunia axillaris HOM05D006392 ORTHO05D008010 7.4e-14 80.9 112 37.5
Actinidia35835 Actinidia chinensis HOM05D006392 ORTHO05D008010 2.8e-13 79.0 53 64.2
Mapoly0064s0103 Marchantia polymorpha HOM05D006392 ORTHO05D008010 4.8e-13 78.2 124 33.9
CBR_g23034 Chara braunii HOM05D006392 ORTHO05D008010 3.1e-12 75.5 117 35.0
SMO196G0156 Selaginella moellendorffii HOM05D006392 ORTHO05D008010 5.3e-12 74.7 109 36.7


User provided reference genes

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