Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G29474 Trifolium pratense HOM05D008031 ORTHO05D010063 1.2e-89 333.2 167 100.0
Medtr8g023390 Medicago truncatula HOM05D008031 ORTHO05D010063 6.9e-58 227.6 168 73.8
Lj3g0013752 Lotus japonicus HOM05D008031 ORTHO05D010063 5.9e-41 171.4 171 60.2
Lalb_Chr10g0101091 Lupinus albus HOM05D008031 ORTHO05D010063 2.5e-39 166.0 174 60.3
Glyma.07G046300 Glycine max HOM05D008031 ORTHO05D010063 4.2e-39 165.2 167 60.5
Phvul.010G122700 Phaseolus vulgaris HOM05D008031 ORTHO05D010063 2.7e-38 162.5 168 59.5
VMungo0331G1222 Vigna mungo HOM05D008031 ORTHO05D010063 2.2e-35 152.9 168 58.9
Glyma.16G014500 Glycine max HOM05D008031 ORTHO05D010063 3.3e-28 129.0 167 49.7
arahy.Tifrunner.gnm1.ann1.PVL51W Arachis hypogaea HOM05D008031 ORTHO05D010063 1.4e-26 123.6 178 50.0
arahy.Tifrunner.gnm1.ann1.8JA41T Arachis hypogaea HOM05D008031 ORTHO05D010063 3.1e-26 122.5 178 48.9
arahy.Tifrunner.gnm1.ann1.CKB8X1 Arachis hypogaea HOM05D008031 ORTHO05D010063 2.0e-25 119.8 178 48.3
GSVIVG01016662001 Vitis vinifera HOM05D008031 ORTHO05D010063 1.0e-24 117.5 171 44.4
Manes.04G151400 Manihot esculenta HOM05D008031 ORTHO05D010063 9.4e-23 110.9 171 42.1
Ciclev10027015m.g Citrus clementina HOM05D008031 ORTHO05D010063 1.6e-22 110.2 148 45.9
Atru.chr1.4165 Acer truncatum HOM05D008031 ORTHO05D010063 2.1e-22 109.8 168 45.8
Actinidia21841 Actinidia chinensis HOM05D008031 ORTHO05D010063 2.7e-22 109.4 170 45.3
CiPaw.02G130600 Carya illinoinensis HOM05D008031 ORTHO05D010063 3.6e-22 109.0 174 45.4
Hma1.2p1_0090F.1_g045750 Hydrangea macrophylla HOM05D008031 ORTHO05D010063 3.6e-22 109.0 171 46.8
Hma1.2p1_2628F.1_g325675 Hydrangea macrophylla HOM05D008031 ORTHO05D010063 3.6e-22 109.0 171 46.8
QL05p000882 Quercus lobata HOM05D008031 ORTHO05D010063 3.6e-22 109.0 174 43.7
QL05p001111 Quercus lobata HOM05D008031 ORTHO05D010063 3.6e-22 109.0 174 43.7
Haze_16140 Corylus avellana HOM05D001728 ORTHO05D004321 8.0e-22 107.8 171 45.0
Atru.chr1.4161 Acer truncatum HOM05D008031 ORTHO05D010063 1.8e-21 106.7 167 44.3
Potri.001G162100 Populus trichocarpa HOM05D008031 ORTHO05D010063 6.7e-21 104.8 161 42.9
MELO3C022708.2 Cucumis melo HOM05D008031 ORTHO05D010063 5.7e-20 101.7 157 45.2
FAN02G3240 Fragaria x ananassa HOM05D008031 ORTHO05D010063 9.7e-20 100.9 152 44.7
RcHm_v2.0_Chr2g0148091 Rosa chinensis HOM05D008031 ORTHO05D010063 2.8e-19 99.4 171 43.3
FvH4_6g35970 Fragaria vesca HOM05D008031 ORTHO05D010063 3.7e-19 99.0 154 44.8
FAN09G4453 Fragaria x ananassa HOM05D008031 ORTHO05D010063 3.7e-19 99.0 154 44.8
FAN14G4753 Fragaria x ananassa HOM05D008031 ORTHO05D010063 3.7e-19 99.0 154 44.8
COL.COLO4_30875 Corchorus olitorius HOM05D008031 ORTHO05D010063 4.8e-19 98.6 172 39.5
Prupe.3G030600 Prunus persica HOM05D008031 ORTHO05D010063 4.8e-19 98.6 170 41.2
CiPaw.01G211000 Carya illinoinensis HOM05D008031 ORTHO05D010063 6.3e-19 98.2 164 42.1
CsaV3_3G031060 Cucumis sativus L. HOM05D008031 ORTHO05D010063 6.3e-19 98.2 157 43.3
FAN05G2192 Fragaria x ananassa HOM05D008031 ORTHO05D010063 1.4e-18 97.1 152 44.7
TAR626G1534 Trochodendron aralioides HOM05D008031 ORTHO05D010063 1.4e-18 97.1 173 42.8
Thecc.06G130800 Theobroma cacao HOM05D008031 ORTHO05D010063 2.4e-18 96.3 174 40.8
CSS0025062 Camellia sinensis var. sinensis HOM05D001728 ORTHO05D004321 5.3e-18 95.1 158 41.1
TWI14G1127 Tripterygium wilfordii HOM05D008031 ORTHO05D010063 7.0e-18 94.7 164 40.9
Gohir.D10G051032 Gossypium hirsutum HOM05D001728 ORTHO05D004321 2.0e-17 93.2 171 40.9
Gorai.011G054900 Gossypium raimondii HOM05D001728 ORTHO05D004321 2.0e-17 93.2 171 40.9
Gohir.A10G048037 Gossypium hirsutum HOM05D001728 ORTHO05D004321 2.6e-17 92.8 170 40.6
Potri.003G073200 Populus trichocarpa HOM05D008031 ORTHO05D010063 3.5e-17 92.4 163 39.3
Cpa.g.sc25.199 Carica papaya HOM05D008031 ORTHO05D010063 4.5e-17 92.0 171 39.8
ClCG07G014260 Citrullus lanatus HOM05D008031 ORTHO05D010063 7.7e-17 91.3 170 40.6
Peaxi162Scf00038g02327 Petunia axillaris HOM05D008031 ORTHO05D010063 1.0e-16 90.9 173 38.7
MD09G1172200 Malus domestica HOM05D008031 ORTHO05D010063 2.9e-16 89.4 158 43.0
Cfa003457 Carpinus fangiana HOM05D008031 ORTHO05D010063 6.5e-16 88.2 171 38.6
Duzib235G0155 Durio zibethinus HOM05D008031 ORTHO05D010063 8.5e-16 87.8 144 41.7
MD17G1154700 Malus domestica HOM05D008031 ORTHO05D010063 8.5e-16 87.8 158 43.0
MBI19_g32875_MAGBIO Magnolia biondii HOM05D008031 ORTHO05D010063 1.9e-15 86.7 171 42.1
Oeu019510.1 Olea europaea HOM05D008031 ORTHO05D010063 2.5e-15 86.3 157 40.8
Actinidia24421 Actinidia chinensis HOM05D001728 ORTHO05D004321 4.2e-15 85.5 170 40.6
Sed0024761 Sechium edule HOM05D008031 ORTHO05D010063 4.2e-15 85.5 159 42.8
Eucgr.J02592 Eucalyptus grandis HOM05D008031 ORTHO05D010063 1.6e-14 83.6 173 39.9
Solyc03g123670.3 Solanum lycopersicum HOM05D008031 ORTHO05D010063 2.1e-14 83.2 176 40.3
SGA_v2.0_scaffold71G23934 Striga asiatica HOM05D008031 ORTHO05D010063 2.7e-14 82.8 173 38.2
PGR102G3014 Punica granatum HOM05D008031 ORTHO05D010063 8.0e-14 81.3 164 39.0
PGSC0003DMG400009151 Solanum tuberosum HOM05D008031 ORTHO05D010063 1.4e-13 80.5 176 39.8
Rhsim08G0245200 Rhododendron simsii HOM05D008031 ORTHO05D010063 4.0e-13 79.0 156 38.5
Sopen03g041440 Solanum pennellii HOM05D008031 ORTHO05D010063 8.8e-13 77.8 175 37.1
Aqoxy7G04192 Aquilegia oxysepala HOM05D008031 ORTHO05D010063 9.7e-12 74.3 166 37.3
Lsat_1_v5_gn_4_90600 Lactuca sativa HOM05D008031 ORTHO05D010063 1.7e-11 73.6 153 37.3
Cc04_g00650 Coffea canephora HOM05D008031 ORTHO05D010063 2.2e-11 73.2 166 38.6
Migut.I01137 Erythranthe guttata HOM05D008031 ORTHO05D010063 2.2e-11 73.2 173 35.8
Nitab4.5_0006338g0010 Nicotiana tabacum HOM05D008031 ORTHO05D010063 6.3e-11 71.6 176 36.9
CANSAT56G3277 Cannabis sativa HOM05D008031 ORTHO05D010063 8.2e-11 71.2 161 34.8
Nitab4.5_0006966g0010 Nicotiana tabacum HOM05D008031 ORTHO05D010063 8.2e-11 71.2 176 36.9
Oeu053417.1 Olea europaea HOM05D008031 ORTHO05D010063 8.2e-11 71.2 156 38.5
Ah.08g217400 Amaranthus hybridus HOM05D008031 ORTHO05D010063 9.1e-10 67.8 176 34.1
Eucgr.I02164 Eucalyptus grandis HOM05D008031 ORTHO05D010063 1.1e-07 60.8 173 35.3
Dinv20378 Davidia involucrata HOM05D001728 ORTHO05D004321 3.2e-07 59.3 111 42.3
Rhsim08G0245400 Rhododendron simsii HOM05D002316 ORTHO05D002280 2.1e-06 56.6 73 47.9
Peaxi162Scf00065g00138 Petunia axillaris HOM05D005099 ORTHO05D006087 2.7e-06 56.2 191 31.9
CDE05G1539 Ceratophyllum demersum HOM05D008031 ORTHO05D010063 4.7e-06 55.5 177 31.6
MBI18_g04556_MAGBIO Magnolia biondii HOM05D005099 ORTHO05D006087 4.7e-06 55.5 167 30.5
Oeu015468.1 Olea europaea HOM05D008031 ORTHO05D010063 4.7e-06 55.5 154 31.8
TAR362G0212 Trochodendron aralioides HOM05D005099 ORTHO05D006087 6.1e-06 55.1 174 30.5
Oeu033813.1 Olea europaea HOM05D005099 ORTHO05D006087 8.0e-06 54.7 174 35.6


User provided reference genes

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