Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G29469 Trifolium pratense HOM05D004563 ORTHO05D002944 2.4e-179 632.1 326 100.0
Medtr2g091180 Medicago truncatula HOM05D004563 ORTHO05D002944 7.5e-101 371.3 326 63.8
Glyma.13G291600 Glycine max HOM05D004563 ORTHO05D002944 5.6e-72 275.4 361 50.1
Ca_01462_v3 Cicer arietinum L. HOM05D004563 ORTHO05D002944 2.0e-69 266.9 323 51.7
Glyma.12G209700 Glycine max HOM05D004563 ORTHO05D002944 1.1e-64 251.1 358 46.4
Lj3g0023253 Lotus japonicus HOM05D004563 ORTHO05D002944 1.1e-56 224.6 356 44.4
Lj3g0000357 Lotus japonicus HOM05D004563 ORTHO05D002944 2.4e-46 190.3 352 38.6
Medtr4g079720 Medicago truncatula HOM05D004563 ORTHO05D002944 1.4e-43 181.0 346 38.7
Lalb_Chr03g0029881 Lupinus albus HOM05D004563 ORTHO05D002944 1.9e-43 180.6 358 39.1
arahy.Tifrunner.gnm1.ann1.P6YWRU Arachis hypogaea HOM05D004563 ORTHO05D002944 3.0e-41 173.3 358 36.6
arahy.Tifrunner.gnm1.ann1.65XND6 Arachis hypogaea HOM05D004563 ORTHO05D002944 1.1e-40 171.4 357 36.4
Phvul.005G096100 Phaseolus vulgaris HOM05D004563 ORTHO05D002944 2.5e-40 170.2 343 40.5
Ca_18892_v3 Cicer arietinum L. HOM05D004563 ORTHO05D002944 5.9e-37 159.1 362 38.1
Glyma.18G179200 Glycine max HOM05D004563 ORTHO05D002944 1.3e-36 157.9 367 37.6
Lalb_Chr14g0367401 Lupinus albus HOM05D004563 ORTHO05D002944 3.8e-36 156.4 346 37.6
arahy.Tifrunner.gnm1.ann1.B2LHN7 Arachis hypogaea HOM05D004563 ORTHO05D002944 1.1e-35 154.8 347 36.0
VMungo1080G1187 Vigna mungo HOM05D002364 ORTHO05D002540 3.2e-35 153.3 336 39.3
arahy.Tifrunner.gnm1.ann1.47XKI7 Arachis hypogaea HOM05D004563 ORTHO05D002944 2.1e-34 150.6 284 37.0
Glyma.12G122400 Glycine max HOM05D004563 ORTHO05D002944 2.3e-33 147.1 353 36.5
Phvul.011G134500 Phaseolus vulgaris HOM05D004563 ORTHO05D002944 2.6e-29 133.7 352 35.2
Ca_14758_v3 Cicer arietinum L. HOM05D002653 ORTHO05D002623 1.4e-25 121.3 222 40.5
VMungo1127G1865 Vigna mungo HOM05D004563 ORTHO05D002944 1.1e-22 111.7 348 33.0
Psat5g276160 Pisum sativum HOM05D004563 ORTHO05D002944 5.2e-17 92.8 190 39.5
Medtr5g052190 Medicago truncatula HOM05D023930 ORTHO05D018030 1.5e-16 91.3 87 64.4
TPR.G30391 Trifolium pratense HOM05D004563 ORTHO05D002944 5.0e-12 76.3 343 28.6
Lalb_Chr19g0134941 Lupinus albus HOM05D004563 ORTHO05D002944 8.5e-12 75.5 147 38.8
QL08p041398 Quercus lobata HOM05D004563 ORTHO05D002944 8.0e-10 68.9 334 26.9
Eucgr.A01904 Eucalyptus grandis HOM05D004563 ORTHO05D002944 2.0e-08 64.3 273 28.2
CANSAT64G2099 Cannabis sativa HOM05D004563 ORTHO05D002944 2.6e-08 63.9 354 27.7
Haze_13348 Corylus avellana HOM05D004563 ORTHO05D002944 9.8e-08 62.0 378 26.5
MD17G1232800 Malus domestica HOM05D004563 ORTHO05D002944 4.8e-07 59.7 285 26.0
Ciclev10015391m.g Citrus clementina HOM05D004563 ORTHO05D002944 6.3e-07 59.3 256 27.3
Prupe.3G122900 Prunus persica HOM05D004563 ORTHO05D002944 1.1e-06 58.5 146 31.5
Psat7g166160 Pisum sativum HOM05D004563 ORTHO05D002944 1.8e-06 57.8 170 33.5
vmacro09223 Vaccinium macrocarpon HOM05D004563 ORTHO05D002944 2.4e-06 57.4 96 40.6
MELO3C019761.2 Cucumis melo HOM05D004563 ORTHO05D002944 7.0e-06 55.8 103 38.8
FAN09G1171 Fragaria x ananassa HOM05D004563 ORTHO05D002944 7.0e-06 55.8 90 35.6
FAN09G4605 Fragaria x ananassa HOM05D004563 ORTHO05D002944 7.0e-06 55.8 90 35.6


User provided reference genes

Program Settings