Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G29412 Trifolium pratense HOM05D008013 ORTHO05D010149 7.6e-40 166.8 88 100.0
Lj1g0002079 Lotus japonicus HOM05D008013 ORTHO05D010149 6.7e-36 153.7 88 90.9
Lalb_Chr19g0126801 Lupinus albus HOM05D008013 ORTHO05D010149 1.9e-35 152.1 88 88.6
Glyma.09G252532 Glycine max HOM05D008013 ORTHO05D010149 3.1e-33 144.8 84 86.9
MD04G1240900 Malus domestica HOM05D008013 ORTHO05D010149 5.3e-33 144.1 88 81.8
Glyma.18G240151 Glycine max HOM05D008013 ORTHO05D010149 6.9e-33 143.7 84 88.1
Thecc.05G204600 Theobroma cacao HOM05D008013 ORTHO05D010149 1.5e-32 142.5 88 81.8
Haze_04520 Corylus avellana HOM05D008013 ORTHO05D010149 2.0e-32 142.1 88 80.7
MD12G1257800 Malus domestica HOM05D008013 ORTHO05D010149 2.0e-32 142.1 88 79.5
Phvul.008G056200 Phaseolus vulgaris HOM05D008013 ORTHO05D010149 2.0e-32 142.1 87 85.1
Actinidia34775 Actinidia chinensis HOM05D008013 ORTHO05D010149 4.5e-32 141.0 88 79.5
CiPaw.08G117300 Carya illinoinensis HOM05D008013 ORTHO05D010149 9.9e-32 139.8 88 77.3
TWI59G0485 Tripterygium wilfordii HOM05D008013 ORTHO05D010149 9.9e-32 139.8 87 78.2
RcHm_v2.0_Chr3g0448311 Rosa chinensis HOM05D008013 ORTHO05D010149 1.3e-31 139.4 88 78.4
Manes.09G183801 Manihot esculenta HOM05D008013 ORTHO05D010149 8.4e-31 136.7 88 75.0
CSS0003713 Camellia sinensis var. sinensis HOM05D008013 ORTHO05D010149 1.1e-30 136.3 88 77.3
CSS0043393 Camellia sinensis var. sinensis HOM05D008013 ORTHO05D010149 1.1e-30 136.3 88 77.3
Gohir.A08G224100 Gossypium hirsutum HOM05D008013 ORTHO05D010149 1.1e-30 136.3 88 78.4
Gohir.D08G244400 Gossypium hirsutum HOM05D008013 ORTHO05D010149 1.1e-30 136.3 88 78.4
Rhsim09G0131000 Rhododendron simsii HOM05D008013 ORTHO05D010149 1.9e-30 135.6 89 75.3
THA.LOC104803516 Tarenaya hassleriana HOM05D008013 ORTHO05D010149 1.9e-30 135.6 88 77.3
GSVIVG01019150001 Vitis vinifera HOM05D008013 ORTHO05D010149 4.2e-30 134.4 88 76.1
Dinv02912 Davidia involucrata HOM05D008013 ORTHO05D010149 1.6e-29 132.5 88 72.7
Ciclev10013456m.g Citrus clementina HOM05D008013 ORTHO05D010149 7.9e-29 130.2 87 77.0
FAN05G0262 Fragaria x ananassa HOM05D008013 ORTHO05D010149 2.3e-28 128.6 101 66.3
Nn1g08299 Nelumbo nucifera HOM05D008013 ORTHO05D010149 2.3e-28 128.6 88 71.6
Cc09_g03310 Coffea canephora HOM05D008013 ORTHO05D010149 3.0e-28 128.3 88 71.6
Atru.chr12.2150 Acer truncatum HOM05D008013 ORTHO05D010149 3.9e-28 127.9 81 79.0
CAN.G4.29 Capsicum annuum HOM05D008013 ORTHO05D010149 8.7e-28 126.7 85 72.9
CsaV3_5G032690 Cucumis sativus L. HOM05D008013 ORTHO05D010149 8.7e-28 126.7 88 73.9
arahy.Tifrunner.gnm1.ann1.L7M8PN Arachis hypogaea HOM05D008013 ORTHO05D010149 1.5e-27 125.9 77 83.1
Oeu001239.1 Olea europaea HOM05D008013 ORTHO05D010149 1.9e-27 125.6 88 71.6
Sed0019978 Sechium edule HOM05D008013 ORTHO05D010149 2.5e-27 125.2 88 70.5
HanXRQChr11g0333671 Helianthus annuus HOM05D008013 ORTHO05D010149 5.6e-27 124.0 88 69.3
Solyc04g150139.1 Solanum lycopersicum HOM05D008013 ORTHO05D010149 5.6e-27 124.0 85 72.9
Potri.019G051850 Populus trichocarpa HOM05D008013 ORTHO05D010149 1.3e-26 122.9 79 75.9
Gorai.004G260700 Gossypium raimondii HOM05D008013 ORTHO05D010149 2.8e-26 121.7 81 76.5
CANSAT54G1767 Cannabis sativa HOM05D000837 ORTHO05D008386 6.2e-26 120.6 81 71.6
Gohir.D13G159800 Gossypium hirsutum HOM05D008013 ORTHO05D010149 8.2e-26 120.2 81 75.3
Thhalv10026665m.g Eutrema salsugineum HOM05D008013 ORTHO05D010149 2.4e-25 118.6 84 69.0
Sp7g28270 Schrenkiella parvula HOM05D008013 ORTHO05D010149 2.4e-25 118.6 84 67.9
Gohir.A13G155000 Gossypium hirsutum HOM05D008013 ORTHO05D010149 4.0e-25 117.9 81 74.1
AL7G21760 Arabidopsis lyrata HOM05D008013 ORTHO05D010149 5.3e-25 117.5 84 69.0
Carub.0007s1021 Capsella rubella HOM05D008013 ORTHO05D010149 5.3e-25 117.5 84 66.7
Migut.F02069 Erythranthe guttata HOM05D008013 ORTHO05D010149 6.9e-25 117.1 88 63.6
PGR119G0441 Punica granatum HOM05D000837 ORTHO05D008386 6.9e-25 117.1 81 67.9
AT4G30390 Arabidopsis thaliana HOM05D008013 ORTHO05D010149 2.6e-24 115.2 84 65.5
Hund07321 Selenicereus undatus HOM05D008013 ORTHO05D010149 5.8e-24 114.0 80 68.8
Aa31LG2G20150 Aethionema arabicum HOM05D008013 ORTHO05D010149 1.3e-23 112.8 84 64.3
EL10Ac4g09411 Beta vulgaris HOM05D008013 ORTHO05D010149 1.7e-23 112.5 83 66.3
vmacro10397 Vaccinium macrocarpon HOM05D000837 ORTHO05D008386 1.7e-23 112.5 103 61.2
A08p19260 Brassica napus HOM05D008013 ORTHO05D010149 4.9e-23 110.9 84 63.1
BraA08t33887Z Brassica rapa HOM05D008013 ORTHO05D010149 4.9e-23 110.9 84 63.1
unitig_736.g22502 Utricularia gibba HOM05D008013 ORTHO05D010149 3.2e-22 108.2 81 64.2
BcaNung00543 Brassica carinata HOM05D008013 ORTHO05D010149 4.2e-22 107.8 84 59.5
C07p57840 Brassica napus HOM05D008013 ORTHO05D010149 4.2e-22 107.8 84 59.5
BolC7t46244H Brassica oleracea HOM05D008013 ORTHO05D010149 4.2e-22 107.8 84 59.5
A03p59800 Brassica napus HOM05D008013 ORTHO05D010149 5.5e-22 107.5 85 57.6
Ah.06g195780 Amaranthus hybridus HOM05D008013 ORTHO05D010149 7.1e-22 107.1 87 62.1
BraA03t15033Z Brassica rapa HOM05D008013 ORTHO05D010149 6.1e-21 104.0 84 58.3
PSO357G0534 Papaver somniferum HOM05D008013 ORTHO05D010149 6.1e-21 104.0 84 57.1
Hund21874 Selenicereus undatus HOM05D008013 ORTHO05D010149 1.3e-20 102.8 69 72.5
PSO170G5632 Papaver somniferum HOM05D000837 ORTHO05D008386 6.7e-20 100.5 84 56.0
SHI02464 Sapria himalayana HOM05D008013 ORTHO05D010149 6.7e-20 100.5 79 63.3
HanXRQChr05g0156911 Helianthus annuus HOM05D000837 ORTHO05D008386 8.7e-20 100.1 79 63.3
ClCG10G008070 Citrullus lanatus HOM05D000837 ORTHO05D008386 5.7e-19 97.4 117 49.6
Pp3c1_15100 Physcomitrium patens HOM05D008013 ORTHO05D010149 2.2e-18 95.5 86 50.0
Sabra19G0056800 Salix brachista HOM05D008013 ORTHO05D010149 1.4e-17 92.8 129 44.2
BcaB03g12645 Brassica carinata HOM05D008013 ORTHO05D010149 2.9e-15 85.1 85 54.1
PGSC0003DMG402023117 Solanum tuberosum HOM05D008013 ORTHO05D010149 1.9e-14 82.4 85 52.9
Sed0019520 Sechium edule HOM05D008013 ORTHO05D010149 2.7e-13 78.6 52 73.1
AagrBONN_evm.TU.Sc2ySwM_228.1824 Anthoceros agrestis HOM05D008013 ORTHO05D010149 6.1e-13 77.4 80 50.0
FAN09G3946 Fragaria x ananassa HOM05D000837 ORTHO05D008386 3.3e-11 71.6 50 70.0
CARHR238290 Cardamine hirsuta HOM05D008013 ORTHO05D010149 7.4e-11 70.5 49 65.3
TAR109G0001 Trochodendron aralioides HOM05D008013 ORTHO05D010149 4.8e-10 67.8 41 73.2
Sc16g0010260 Simmondsia chinensis HOM05D008013 ORTHO05D010149 6.3e-10 67.4 44 70.5
BcaC01g01153 Brassica carinata HOM05D008013 ORTHO05D010149 6.9e-09 63.9 58 55.2
Mapoly0013s0068 Marchantia polymorpha HOM05D008013 ORTHO05D010149 9.1e-09 63.5 82 42.7
MBI07_g00621_MAGBIO Magnolia biondii HOM05D000837 ORTHO05D008386 3.4e-08 61.6 50 58.0
Eucgr.B01381 Eucalyptus grandis HOM05D008013 ORTHO05D010149 5.0e-07 57.8 76 44.7
ATR0609G113 Amborella trichopoda HOM05D008013 ORTHO05D010149 2.5e-06 55.5 50 48.0


User provided reference genes

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