Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G29321 Trifolium pratense HOM05D000014 ORTHO05D016392 2.0e-72 275.8 151 100.0
TPR.G35155 Trifolium pratense HOM05D000014 ORTHO05D016392 8.7e-44 180.6 97 90.7
TPR.G28939 Trifolium pratense HOM05D000014 ORTHO05D016392 6.5e-39 164.5 90 87.8
TPR.G28674 Trifolium pratense HOM05D000014 ORTHO05D016392 4.3e-35 151.8 99 76.8
TPR.G13842 Trifolium pratense HOM05D000014 ORTHO05D016392 1.6e-21 106.7 60 86.7
TPR.G21210 Trifolium pratense HOM05D000014 ORTHO05D016392 9.7e-11 70.9 41 78.0
TPR.G21135 Trifolium pratense HOM05D000014 ORTHO05D016392 1.3e-10 70.5 42 76.2
TPR.G9914 Trifolium pratense HOM05D000014 ORTHO05D000016 6.3e-10 68.2 66 50.0
Ca_06592_v3 Cicer arietinum L. HOM05D002448 ORTHO05D000016 4.1e-09 65.5 84 39.3
VMungo0720G0830 Vigna mungo HOM05D000014 ORTHO05D000016 4.1e-09 65.5 86 40.7
Ca_11551_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 9.1e-09 64.3 84 39.3
TPR.G15155 Trifolium pratense HOM05D000014 ORTHO05D011222 2.7e-08 62.8 91 37.4
CANSAT01G1394 Cannabis sativa HOM05D000014 ORTHO05D000016 3.5e-08 62.4 96 35.4
Ca_19468_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 3.5e-08 62.4 84 38.1
Ca_27737_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 3.5e-08 62.4 84 39.3
CANSAT01G1538 Cannabis sativa HOM05D000014 ORTHO05D000016 4.5e-08 62.0 85 37.6
Ca_12185_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 4.5e-08 62.0 84 38.1
Ca_23896_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 4.5e-08 62.0 76 40.8
arahy.Tifrunner.gnm1.ann1.CUPE1C Arachis hypogaea HOM05D000014 ORTHO05D000016 5.9e-08 61.6 97 39.2
CANSAT25G0834 Cannabis sativa HOM05D000014 ORTHO05D000016 5.9e-08 61.6 96 35.4
CANSAT54G0792 Cannabis sativa HOM05D000014 ORTHO05D000016 5.9e-08 61.6 96 35.4
CANSAT78G1031 Cannabis sativa HOM05D000014 ORTHO05D000016 5.9e-08 61.6 96 35.4
Ca_08215_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 5.9e-08 61.6 84 38.1
Ca_19085_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 5.9e-08 61.6 84 38.1
CANSAT64G2873 Cannabis sativa HOM05D000014 ORTHO05D000016 7.7e-08 61.2 96 35.4
CANSAT78G1747 Cannabis sativa HOM05D000014 ORTHO05D000016 7.7e-08 61.2 96 36.5
CANSAT80G0547 Cannabis sativa HOM05D000014 ORTHO05D000016 7.7e-08 61.2 96 34.4
arahy.Tifrunner.gnm1.ann1.6CK6EB Arachis hypogaea HOM05D000014 ORTHO05D000016 1.0e-07 60.8 97 39.2
arahy.Tifrunner.gnm1.ann1.B12FQA Arachis hypogaea HOM05D000014 ORTHO05D000016 1.0e-07 60.8 97 39.2
arahy.Tifrunner.gnm1.ann1.Q96CMM Arachis hypogaea HOM05D000014 ORTHO05D000016 1.0e-07 60.8 92 40.2
CANSAT78G0146 Cannabis sativa HOM05D000014 ORTHO05D000016 1.0e-07 60.8 96 35.4
Ca_20529_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 1.0e-07 60.8 84 38.1
Ca_27211_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 1.0e-07 60.8 97 35.1
Ah.01g010830 Amaranthus hybridus HOM05D000014 ORTHO05D000016 1.3e-07 60.5 99 34.3
Ah.01g018090 Amaranthus hybridus HOM05D000014 ORTHO05D000016 1.3e-07 60.5 99 34.3
arahy.Tifrunner.gnm1.ann1.M79Q51 Arachis hypogaea HOM05D000014 ORTHO05D000016 1.3e-07 60.5 86 38.4
CANSAT56G2288 Cannabis sativa HOM05D000014 ORTHO05D000016 1.3e-07 60.5 96 35.4
CANSAT80G1806 Cannabis sativa HOM05D000014 ORTHO05D000016 1.3e-07 60.5 96 34.4
Ca_07044_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 1.3e-07 60.5 82 39.0
Ca_07259_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 1.3e-07 60.5 76 40.8
VMungo1383G2807 Vigna mungo HOM05D000014 ORTHO05D010104 1.3e-07 60.5 91 37.4
Ah.12g065520 Amaranthus hybridus HOM05D000014 ORTHO05D000093 1.7e-07 60.1 99 34.3
arahy.Tifrunner.gnm1.ann1.I9FKSU Arachis hypogaea HOM05D000014 ORTHO05D000016 1.7e-07 60.1 97 37.1
CANSAT11G1067 Cannabis sativa HOM05D000014 ORTHO05D000016 1.7e-07 60.1 84 38.1
CANSAT25G2739 Cannabis sativa HOM05D000014 ORTHO05D000016 1.7e-07 60.1 85 36.5
CANSAT54G2205 Cannabis sativa HOM05D000014 ORTHO05D000016 1.7e-07 60.1 96 35.4
CANSAT78G0106 Cannabis sativa HOM05D000014 ORTHO05D000016 1.7e-07 60.1 96 34.4
Ca_05073_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 1.7e-07 60.1 84 38.1
arahy.Tifrunner.gnm1.ann1.5GJE1C Arachis hypogaea HOM05D000014 ORTHO05D000093 2.2e-07 59.7 86 41.9
CANSAT11G1900 Cannabis sativa HOM05D000014 ORTHO05D000016 2.2e-07 59.7 96 34.4
Ca_24172_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 2.2e-07 59.7 80 38.8
arahy.Tifrunner.gnm1.ann1.4LR7U0 Arachis hypogaea HOM05D000014 ORTHO05D000093 2.9e-07 59.3 86 40.7
arahy.Tifrunner.gnm1.ann1.9TN888 Arachis hypogaea HOM05D000014 ORTHO05D000016 2.9e-07 59.3 97 37.1
arahy.Tifrunner.gnm1.ann1.YYP60T Arachis hypogaea HOM05D000014 ORTHO05D000016 2.9e-07 59.3 97 37.1
CANSAT78G1781 Cannabis sativa HOM05D000014 ORTHO05D000016 2.9e-07 59.3 96 34.4
arahy.Tifrunner.gnm1.ann1.2F14L2 Arachis hypogaea HOM05D000014 ORTHO05D000016 3.8e-07 58.9 97 36.1
arahy.Tifrunner.gnm1.ann1.Q1F4QQ Arachis hypogaea HOM05D000014 ORTHO05D000016 3.8e-07 58.9 97 36.1
arahy.Tifrunner.gnm1.ann1.TTVR4U Arachis hypogaea HOM05D000014 ORTHO05D000016 3.8e-07 58.9 86 39.5
CANSAT78G2236 Cannabis sativa HOM05D000014 ORTHO05D000016 3.8e-07 58.9 96 34.4
Ca_05287_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 3.8e-07 58.9 84 38.1
Oeu016732.1 Olea europaea HOM05D000014 ORTHO05D000016 3.8e-07 58.9 100 36.0
arahy.Tifrunner.gnm1.ann1.EQB169 Arachis hypogaea HOM05D000014 ORTHO05D000016 5.0e-07 58.5 97 36.1
arahy.Tifrunner.gnm1.ann1.LW0R14 Arachis hypogaea HOM05D000014 ORTHO05D000016 5.0e-07 58.5 97 36.1
arahy.Tifrunner.gnm1.ann1.U9F3BL Arachis hypogaea HOM05D000014 ORTHO05D000016 5.0e-07 58.5 87 40.2
arahy.Tifrunner.gnm1.ann1.X5U67K Arachis hypogaea HOM05D000014 ORTHO05D000016 5.0e-07 58.5 97 37.1
CANSAT25G2186 Cannabis sativa HOM05D000014 ORTHO05D000016 5.0e-07 58.5 96 35.4
arahy.Tifrunner.gnm1.ann1.K4N7KD Arachis hypogaea HOM05D000014 ORTHO05D000016 6.5e-07 58.2 86 36.0
CANSAT80G0554 Cannabis sativa HOM05D000014 ORTHO05D000016 6.5e-07 58.2 84 36.9
THA.LOC104825201 Tarenaya hassleriana HOM05D000014 ORTHO05D000016 6.5e-07 58.2 77 35.1
CANSAT64G1133 Cannabis sativa HOM05D000014 ORTHO05D000016 8.5e-07 57.8 96 34.4
FvH4_6g23372 Fragaria vesca HOM05D000014 ORTHO05D000016 8.5e-07 57.8 101 35.6
arahy.Tifrunner.gnm1.ann1.HP9FM7 Arachis hypogaea HOM05D000014 ORTHO05D000016 1.1e-06 57.4 76 40.8
arahy.Tifrunner.gnm1.ann1.TNV6EF Arachis hypogaea HOM05D000014 ORTHO05D000016 1.1e-06 57.4 97 36.1
CANSAT21G0978 Cannabis sativa HOM05D000014 ORTHO05D000016 1.1e-06 57.4 84 38.1
CANSAT80G1312 Cannabis sativa HOM05D000014 ORTHO05D000016 1.1e-06 57.4 84 36.9
SHI47671 Sapria himalayana HOM05D000014 ORTHO05D000016 1.1e-06 57.4 90 35.6
Atru.chr7.342 Acer truncatum HOM05D000014 ORTHO05D000016 1.5e-06 57.0 83 36.1
CANSAT01G0424 Cannabis sativa HOM05D000014 ORTHO05D000016 1.5e-06 57.0 84 35.7
CANSAT11G1889 Cannabis sativa HOM05D000014 ORTHO05D000016 1.5e-06 57.0 97 34.0
SHI49828 Sapria himalayana HOM05D000014 ORTHO05D000016 1.5e-06 57.0 90 35.6
THA.LOC104801906 Tarenaya hassleriana HOM05D000014 ORTHO05D000093 1.5e-06 57.0 77 36.4
THA.LOC109116024 Tarenaya hassleriana HOM05D000014 ORTHO05D000016 1.5e-06 57.0 77 36.4
THA.LOC109116178 Tarenaya hassleriana HOM05D000014 ORTHO05D000016 1.5e-06 57.0 77 36.4
Ah.02g117660 Amaranthus hybridus HOM05D000014 ORTHO05D000016 1.9e-06 56.6 99 32.3
Ca_14336_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 1.9e-06 56.6 80 36.2
Oeu040312.1 Olea europaea HOM05D000014 ORTHO05D000016 1.9e-06 56.6 100 34.0
Atru.chr12.2468 Acer truncatum HOM05D000014 ORTHO05D000016 2.5e-06 56.2 97 30.9
arahy.Tifrunner.gnm1.ann1.LBDF62 Arachis hypogaea HOM05D000014 ORTHO05D000016 2.5e-06 56.2 97 35.1
Ca_03125_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 2.5e-06 56.2 84 36.9
Phvul.004G093400 Phaseolus vulgaris HOM05D000014 ORTHO05D000016 2.5e-06 56.2 87 32.2
Ah.13g070800 Amaranthus hybridus HOM05D000014 ORTHO05D000016 3.2e-06 55.8 83 36.1
arahy.Tifrunner.gnm1.ann1.FDM7T1 Arachis hypogaea HOM05D000014 ORTHO05D000016 3.2e-06 55.8 88 38.6
CANSAT56G0185 Cannabis sativa HOM05D000014 ORTHO05D000016 3.2e-06 55.8 85 38.8
CANSAT78G2394 Cannabis sativa HOM05D000014 ORTHO05D000016 3.2e-06 55.8 84 35.7
THA.LOC104809177 Tarenaya hassleriana HOM05D000014 ORTHO05D000016 3.2e-06 55.8 77 35.1
arahy.Tifrunner.gnm1.ann1.W5QG8V Arachis hypogaea HOM05D000014 ORTHO05D000016 4.2e-06 55.5 77 39.0
CANSAT11G1285 Cannabis sativa HOM05D000014 ORTHO05D000016 4.2e-06 55.5 96 32.3
AUR62028249 Chenopodium quinoa HOM05D012416 ORTHO05D000016 4.2e-06 55.5 71 36.6
AUR62042040 Chenopodium quinoa HOM05D012416 ORTHO05D000016 4.2e-06 55.5 71 36.6
ECA240G3601 Erigeron canadensis HOM05D000014 ORTHO05D000016 4.2e-06 55.5 81 37.0
Oeu011732.1 Olea europaea HOM05D000014 ORTHO05D000016 4.2e-06 55.5 100 33.0
Oeu012463.1 Olea europaea HOM05D000014 ORTHO05D000016 4.2e-06 55.5 84 36.9
Oeu026335.1 Olea europaea HOM05D000014 ORTHO05D000016 4.2e-06 55.5 84 36.9
Oeu053640.1 Olea europaea HOM05D000014 ORTHO05D000016 4.2e-06 55.5 88 38.6
Oeu062184.1 Olea europaea HOM05D000014 ORTHO05D000016 4.2e-06 55.5 84 36.9
arahy.Tifrunner.gnm1.ann1.V7ESBJ Arachis hypogaea HOM05D000014 ORTHO05D000016 5.5e-06 55.1 89 36.0
Oeu025149.1 Olea europaea HOM05D000014 ORTHO05D000016 5.5e-06 55.1 84 36.9
CANSAT01G0105 Cannabis sativa HOM05D000014 ORTHO05D000016 7.2e-06 54.7 84 35.7
Lj2g0009123 Lotus japonicus HOM05D000014 ORTHO05D000016 7.2e-06 54.7 88 34.1
Oeu063635.1 Olea europaea HOM05D000014 ORTHO05D000016 7.2e-06 54.7 98 33.7
arahy.Tifrunner.gnm1.ann1.DTZ0UQ Arachis hypogaea HOM05D000014 ORTHO05D000016 9.4e-06 54.3 97 35.1
arahy.Tifrunner.gnm1.ann1.J83EUV Arachis hypogaea HOM05D000014 ORTHO05D000016 9.4e-06 54.3 84 35.7
AUR62015090 Chenopodium quinoa HOM05D000014 ORTHO05D000016 9.4e-06 54.3 87 29.9
Manes.04G051445 Manihot esculenta HOM05D000014 ORTHO05D000016 9.4e-06 54.3 97 33.0
Oeu002512.1 Olea europaea HOM05D000014 ORTHO05D000016 9.4e-06 54.3 84 36.9
Oeu031781.1 Olea europaea HOM05D000014 ORTHO05D000016 9.4e-06 54.3 102 34.3


User provided reference genes

Program Settings