Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G29296 Trifolium pratense HOM05D006957 ORTHO05D008647 2.9e-162 575.1 280 100.0
Medtr4g132350 Medicago truncatula HOM05D006957 ORTHO05D008647 8.1e-128 460.7 281 83.3
Psat4g006040 Pisum sativum HOM05D006957 ORTHO05D008647 3.8e-125 451.8 282 83.3
arahy.Tifrunner.gnm1.ann1.SK97UM Arachis hypogaea HOM05D006957 ORTHO05D008647 4.8e-120 434.9 282 80.1
arahy.Tifrunner.gnm1.ann1.VHEB9D Arachis hypogaea HOM05D006957 ORTHO05D008647 1.1e-119 433.7 282 79.8
Lalb_Chr07g0177131 Lupinus albus HOM05D006957 ORTHO05D008647 1.7e-117 426.4 294 75.2
Glyma.17G012100 Glycine max HOM05D006957 ORTHO05D008647 3.5e-115 418.7 284 76.8
Lj4g0000977 Lotus japonicus HOM05D006957 ORTHO05D008647 7.4e-113 411.0 280 75.0
Glyma.07G262000 Glycine max HOM05D006957 ORTHO05D008647 2.8e-112 409.1 284 76.8
VMungo1215G0309 Vigna mungo HOM05D006957 ORTHO05D008647 2.8e-112 409.1 284 76.4
Phvul.003G080300 Phaseolus vulgaris HOM05D006957 ORTHO05D008647 1.2e-110 403.7 284 76.1
QL05p072698 Quercus lobata HOM05D006957 ORTHO05D008647 5.3e-103 378.3 284 68.0
RcHm_v2.0_Chr5g0077361 Rosa chinensis HOM05D006957 ORTHO05D008647 1.1e-100 370.5 280 68.6
Dinv13912 Davidia involucrata HOM05D006957 ORTHO05D008647 5.5e-100 368.2 283 67.1
Lj1A1232T100 Lonicera japonica HOM05D006957 ORTHO05D008647 2.1e-99 366.3 283 65.7
FvH4_3g43300 Fragaria vesca HOM05D006957 ORTHO05D008647 2.7e-99 365.9 280 67.1
Cfa000203 Carpinus fangiana HOM05D006957 ORTHO05D008647 1.3e-98 363.6 285 66.7
FAN25G2833 Fragaria x ananassa HOM05D006957 ORTHO05D008647 1.8e-98 363.2 295 65.1
Atru.chr10.2253 Acer truncatum HOM05D006957 ORTHO05D008647 5.1e-98 361.7 284 65.8
FAN16G3059 Fragaria x ananassa HOM05D006957 ORTHO05D008647 3.3e-97 359.0 288 65.3
FAN21G2957 Fragaria x ananassa HOM05D006957 ORTHO05D008647 3.3e-97 359.0 295 63.4
FAN11G3374 Fragaria x ananassa HOM05D006957 ORTHO05D008647 2.8e-96 355.9 295 63.7
GSVIVG01012704001 Vitis vinifera HOM05D006957 ORTHO05D008647 4.8e-96 355.1 230 76.1
Ca_21073_v3 Cicer arietinum L. HOM05D006957 ORTHO05D008647 1.4e-95 353.6 191 90.1
Potri.011G006700 Populus trichocarpa HOM05D006957 ORTHO05D008647 1.8e-95 353.2 286 65.0
TWI38G1647 Tripterygium wilfordii HOM05D006957 ORTHO05D008647 3.1e-95 352.4 284 65.5
Ciclev10016210m.g Citrus clementina HOM05D006957 ORTHO05D008647 4.5e-94 348.6 283 65.7
CSS0002589 Camellia sinensis var. sinensis HOM05D006957 ORTHO05D008647 1.1e-92 344.0 283 65.4
vmacro15796 Vaccinium macrocarpon HOM05D006957 ORTHO05D008647 1.4e-92 343.6 234 74.4
MELO3C007402.2 Cucumis melo HOM05D006957 ORTHO05D008647 1.9e-92 343.2 286 64.0
Prupe.6G022000 Prunus persica HOM05D006957 ORTHO05D008647 1.9e-92 343.2 286 64.3
CANSAT56G0113 Cannabis sativa HOM05D006957 ORTHO05D008647 3.2e-92 342.4 247 70.9
Haze_06820 Corylus avellana HOM05D006957 ORTHO05D008647 5.5e-92 341.7 312 60.6
Manes.17G025800 Manihot esculenta HOM05D006957 ORTHO05D008647 5.5e-92 341.7 231 72.7
COL.COLO4_31796 Corchorus olitorius HOM05D006957 ORTHO05D008647 1.2e-91 340.5 257 70.0
ECA234G3681 Erigeron canadensis HOM05D006957 ORTHO05D008647 1.6e-91 340.1 253 68.8
Lsat_1_v5_gn_4_59280 Lactuca sativa HOM05D006957 ORTHO05D008647 4.6e-91 338.6 232 74.6
Sed0022215 Sechium edule HOM05D006957 ORTHO05D008647 1.0e-90 337.4 282 63.1
ClCG01G021850 Citrullus lanatus HOM05D006957 ORTHO05D008647 1.4e-90 337.0 282 63.5
CsaV3_6G048910 Cucumis sativus L. HOM05D006957 ORTHO05D008647 1.8e-90 336.7 283 63.3
HanXRQChr16g0515501 Helianthus annuus HOM05D006957 ORTHO05D008647 6.7e-90 334.7 231 71.9
Migut.M01335 Erythranthe guttata HOM05D006957 ORTHO05D008647 8.8e-90 334.3 230 72.6
PGR042G2408 Punica granatum HOM05D006957 ORTHO05D008647 2.5e-89 332.8 220 74.1
CAN.G1014.10 Capsicum annuum HOM05D006957 ORTHO05D008647 3.3e-89 332.4 281 62.3
MD11G1027900 Malus domestica HOM05D006957 ORTHO05D008647 4.3e-89 332.0 282 62.4
Thecc.06G223400 Theobroma cacao HOM05D006957 ORTHO05D008647 4.3e-89 332.0 240 70.4
Eucgr.E03906 Eucalyptus grandis HOM05D006957 ORTHO05D008647 1.3e-88 330.5 226 73.9
Solyc02g080780.3 Solanum lycopersicum HOM05D006957 ORTHO05D008647 1.3e-88 330.5 283 61.8
Eucgr.L02772 Eucalyptus grandis HOM05D006957 ORTHO05D008647 1.7e-88 330.1 226 72.6
Sabra04G0005100 Salix brachista HOM05D006957 ORTHO05D008647 2.2e-88 329.7 306 57.2
Sopen02g025470 Solanum pennellii HOM05D006957 ORTHO05D008647 2.2e-88 329.7 285 61.8
Gohir.D06G155200 Gossypium hirsutum HOM05D006957 ORTHO05D008647 6.3e-88 328.2 259 66.4
MBI18_g04903_MAGBIO Magnolia biondii HOM05D006957 ORTHO05D008647 1.1e-87 327.4 290 61.0
SalBow8G2851 Salvia bowleyana HOM05D006957 ORTHO05D008647 1.4e-87 327.0 227 70.0
Cc09_g01500 Coffea canephora HOM05D006957 ORTHO05D008647 3.1e-87 325.9 231 69.3
Gohir.A06G149100 Gossypium hirsutum HOM05D006957 ORTHO05D008647 4.1e-87 325.5 259 66.4
MSTRG.7198 Avicennia marina HOM05D006957 ORTHO05D008647 1.5e-86 323.6 282 61.7
Nitab4.5_0007963g0030 Nicotiana tabacum HOM05D006957 ORTHO05D008647 7.7e-86 321.2 222 70.7
DCAR_028192 Daucus carota HOM05D006957 ORTHO05D008647 1.3e-85 320.5 274 63.9
SGA_v2.0_scaffold4G01906 Striga asiatica HOM05D006957 ORTHO05D008647 2.2e-85 319.7 230 67.4
Nitab4.5_0002695g0060 Nicotiana tabacum HOM05D006957 ORTHO05D008647 2.9e-85 319.3 222 69.8
TAR629G0592 Trochodendron aralioides HOM05D006957 ORTHO05D008647 2.9e-85 319.3 276 61.6
Aqoxy4G01856 Aquilegia oxysepala HOM05D006957 ORTHO05D008647 4.2e-84 315.5 189 77.8
QL02p099916 Quercus lobata HOM05D006957 ORTHO05D008647 7.2e-84 314.7 183 80.3
EL10Ac8g20084 Beta vulgaris HOM05D006957 ORTHO05D008647 9.4e-84 314.3 196 76.0
Peaxi162Scf00178g01715 Petunia axillaris HOM05D006957 ORTHO05D008647 1.6e-83 313.5 216 70.8
Duzib160G0853 Durio zibethinus HOM05D006957 ORTHO05D008647 2.1e-83 313.2 242 68.2
THA.LOC104818712 Tarenaya hassleriana HOM05D006957 ORTHO05D008647 2.1e-83 313.2 287 58.5
PGSC0003DMG400016446 Solanum tuberosum HOM05D006957 ORTHO05D008647 3.6e-83 312.4 277 60.6
AUR62012727 Chenopodium quinoa HOM05D006957 ORTHO05D008647 4.7e-83 312.0 283 59.7
AUR62021927 Chenopodium quinoa HOM05D006957 ORTHO05D008647 4.7e-83 312.0 196 75.0
Actinidia11860 Actinidia chinensis HOM05D006957 ORTHO05D008647 1.4e-82 310.5 281 60.5
unitig_748.g7953 Utricularia gibba HOM05D006957 ORTHO05D008647 1.8e-82 310.1 230 65.2
PSO832G3220 Papaver somniferum HOM05D006957 ORTHO05D008647 3.9e-82 308.9 191 77.0
Rhsim02G0105900 Rhododendron simsii HOM05D006957 ORTHO05D008647 5.1e-82 308.5 279 59.9
Gorai.010G181400 Gossypium raimondii HOM05D006957 ORTHO05D008647 1.5e-81 307.0 222 70.7
Os03g0744700 Oryza sativa ssp. japonica HOM05D006957 ORTHO05D008647 3.3e-81 305.8 193 75.1
AT1G62250 Arabidopsis thaliana HOM05D006957 ORTHO05D008647 9.7e-81 304.3 246 62.6
AL2G13680 Arabidopsis lyrata HOM05D006957 ORTHO05D008647 4.8e-80 302.0 246 63.0
Hund21421 Selenicereus undatus HOM05D006957 ORTHO05D008647 8.2e-80 301.2 216 69.4
Duzib192G0359 Durio zibethinus HOM05D006957 ORTHO05D008647 1.1e-79 300.8 186 78.5
CiPaw.09G093600 Carya illinoinensis HOM05D006957 ORTHO05D008647 4.1e-79 298.9 189 77.2
ATR0794G153 Amborella trichopoda HOM05D006957 ORTHO05D008647 5.3e-79 298.5 254 61.4
Sp2g02390 Schrenkiella parvula HOM05D006957 ORTHO05D008647 4.5e-78 295.4 231 63.6
Thhalv10023639m.g Eutrema salsugineum HOM05D006957 ORTHO05D008647 1.7e-77 293.5 193 70.5
Zm00001eb056950 Zea mays HOM05D006957 ORTHO05D008647 2.2e-77 293.1 227 65.6
BcaC02g10501 Brassica carinata HOM05D006957 ORTHO05D008647 3.8e-77 292.4 189 72.5
C04p28180 Brassica napus HOM05D006957 ORTHO05D008647 3.8e-77 292.4 189 72.5
BolC4t24361H Brassica oleracea HOM05D006957 ORTHO05D008647 3.8e-77 292.4 189 72.5
BolC4t24891H Brassica oleracea HOM05D006957 ORTHO05D008647 8.5e-77 291.2 189 72.0
Carub.0002s0276 Capsella rubella HOM05D006957 ORTHO05D008647 8.5e-77 291.2 244 62.3
BcaC06g31885 Brassica carinata HOM05D006957 ORTHO05D008647 1.1e-76 290.8 233 62.7
Ah.09g234750 Amaranthus hybridus HOM05D006957 ORTHO05D008647 7.2e-76 288.1 190 73.2
CDE05G2181 Ceratophyllum demersum HOM05D006957 ORTHO05D008647 4.7e-75 285.4 198 66.2
Nn1g07184 Nelumbo nucifera HOM05D006957 ORTHO05D008647 2.3e-74 283.1 283 56.9
A03p67500 Brassica napus HOM05D006957 ORTHO05D008647 1.0e-69 267.7 225 62.2
BraA01t02718Z Brassica rapa HOM05D006957 ORTHO05D008647 1.0e-69 267.7 225 62.2
BcaC02g10063 Brassica carinata HOM05D006957 ORTHO05D008647 9.4e-68 261.2 165 73.3
Sc05g0009300 Simmondsia chinensis HOM05D006957 ORTHO05D008647 1.4e-66 257.3 248 57.3
Mapoly0071s0090 Marchantia polymorpha HOM05D006957 ORTHO05D008647 4.8e-64 248.8 187 63.1
Pp3c10_11430 Physcomitrium patens HOM05D006957 ORTHO05D008647 1.2e-57 227.6 187 56.7
CiPaw.10G072800 Carya illinoinensis HOM05D006957 ORTHO05D008647 1.8e-50 203.8 121 80.2
C04p33270 Brassica napus HOM05D006957 ORTHO05D008647 1.6e-46 190.7 130 66.9
SMO347G0662 Selaginella moellendorffii HOM05D006957 ORTHO05D008647 5.9e-46 188.7 180 51.1
Oeu051204.1 Olea europaea HOM05D006957 ORTHO05D008647 4.3e-44 182.6 103 78.6
arahy.Tifrunner.gnm1.ann1.EAEB6D Arachis hypogaea HOM05D006957 ORTHO05D008647 1.4e-39 167.5 97 84.5
TAR627G0415 Trochodendron aralioides HOM05D006957 ORTHO05D008647 3.6e-27 126.3 81 72.8
Dinv20064 Davidia involucrata HOM05D006957 ORTHO05D008647 9.9e-25 118.2 135 51.1
SEGI_02842 Sequoiadendron giganteum HOM05D006957 ORTHO05D008647 1.5e-20 104.4 142 44.4
CiPaw.10G072900 Carya illinoinensis HOM05D006957 ORTHO05D008647 3.1e-18 96.7 75 66.7
Cre02.g141850 Chlamydomonas reinhardtii HOM05D006957 ORTHO05D008647 1.9e-15 87.4 152 32.2
AagrBONN_evm.TU.Sc2ySwM_228.4491 Anthoceros agrestis HOM05D006957 ORTHO05D008647 8.1e-11 72.0 114 36.0
PRCOL_00005158 Prasinoderma coloniale HOM05D006957 ORTHO05D008647 9.9e-09 65.1 163 29.4
Cpa.g.sc1199.4 Carica papaya HOM05D006957 ORTHO05D008647 5.4e-07 59.3 34 79.4
Nn1g08227 Nelumbo nucifera HOM05D006957 ORTHO05D008647 6.0e-06 55.8 123 38.2


User provided reference genes

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