Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G2927 Trifolium pratense HOM05D002545 ORTHO05D002335 5.3e-77 290.8 133 100.0
Medtr6g088675 Medicago truncatula HOM05D002545 ORTHO05D002335 2.7e-33 145.6 115 59.1
Medtr3g081050 Medicago truncatula HOM05D002545 ORTHO05D002335 2.0e-31 139.4 103 59.2
Medtr7g057840 Medicago truncatula HOM05D002545 ORTHO05D002335 2.6e-31 139.0 95 64.2
Medtr3g448400 Medicago truncatula HOM05D000003 ORTHO05D000004 2.8e-30 135.6 103 58.3
Medtr3g462420 Medicago truncatula HOM05D002545 ORTHO05D002335 2.0e-28 129.4 103 57.3
TPR.G36226 Trifolium pratense HOM05D002545 ORTHO05D002335 2.0e-28 129.4 85 67.1
Medtr3g011980 Medicago truncatula HOM05D002545 ORTHO05D002335 2.7e-28 129.0 113 54.9
Medtr6g033030 Medicago truncatula HOM05D002545 ORTHO05D002335 2.1e-25 119.4 99 52.5
Medtr0912s0020 Medicago truncatula HOM05D002545 ORTHO05D002335 2.7e-25 119.0 88 62.5
Medtr0043s0050 Medicago truncatula HOM05D002545 ORTHO05D002335 1.0e-24 117.1 88 58.0
Medtr5g063315 Medicago truncatula HOM05D002545 ORTHO05D002335 1.0e-24 117.1 84 63.1
Medtr3g085120 Medicago truncatula HOM05D002545 ORTHO05D002335 1.4e-24 116.7 103 51.5
TPR.G1151 Trifolium pratense HOM05D002545 ORTHO05D002335 2.0e-23 112.8 81 58.0
Medtr1g094270 Medicago truncatula HOM05D002545 ORTHO05D002335 7.5e-23 110.9 103 47.6
Medtr7g056730 Medicago truncatula HOM05D002545 ORTHO05D002335 3.7e-22 108.6 104 47.1
Medtr7g103360 Medicago truncatula HOM05D002545 ORTHO05D002335 1.8e-21 106.3 78 62.8
Medtr5g074450 Medicago truncatula HOM05D002545 ORTHO05D002335 4.1e-21 105.1 85 55.3
Medtr3g040600 Medicago truncatula HOM05D002545 ORTHO05D002335 9.1e-21 104.0 88 54.5
Medtr6g013950 Medicago truncatula HOM05D002545 ORTHO05D002335 5.9e-20 101.3 101 53.5
Medtr8g099690 Medicago truncatula HOM05D002545 ORTHO05D002335 5.9e-20 101.3 96 56.2
Medtr0002s0880 Medicago truncatula HOM05D002545 ORTHO05D002335 1.3e-19 100.1 90 54.4
Medtr4g076130 Medicago truncatula HOM05D002545 ORTHO05D002335 8.6e-19 97.4 88 47.7
Medtr6g006375 Medicago truncatula HOM05D000003 ORTHO05D000004 1.9e-18 96.3 76 56.6
Medtr8g071930 Medicago truncatula HOM05D002545 ORTHO05D002335 1.2e-17 93.6 72 58.3
TPR.G36671 Trifolium pratense HOM05D002545 ORTHO05D002335 2.1e-17 92.8 74 55.4
Medtr8g058405 Medicago truncatula HOM05D002545 ORTHO05D002335 2.8e-17 92.4 110 40.0
Medtr3g104590 Medicago truncatula HOM05D002545 ORTHO05D002335 3.6e-17 92.0 72 58.3
TPR.G36309 Trifolium pratense HOM05D002545 ORTHO05D002335 6.1e-17 91.3 73 57.5
Medtr2g038700 Medicago truncatula HOM05D000003 ORTHO05D002335 2.3e-16 89.4 72 51.4
Medtr4g094385 Medicago truncatula HOM05D002545 ORTHO05D002335 3.0e-16 89.0 88 43.2
Medtr4g056980 Medicago truncatula HOM05D002545 ORTHO05D002335 1.2e-15 87.0 98 45.9
Medtr5g091750 Medicago truncatula HOM05D002545 ORTHO05D002335 4.4e-15 85.1 75 49.3
Medtr7g065810 Medicago truncatula HOM05D002545 ORTHO05D002335 9.8e-15 84.0 75 52.0
Medtr3g078750 Medicago truncatula HOM05D002545 ORTHO05D002335 2.2e-14 82.8 81 49.4
Medtr6g034785 Medicago truncatula HOM05D002545 ORTHO05D002335 2.8e-14 82.4 76 52.6
Medtr4g415380 Medicago truncatula HOM05D002545 ORTHO05D002335 3.7e-14 82.0 108 42.6
Medtr2g064345 Medicago truncatula HOM05D000003 ORTHO05D002335 6.3e-14 81.3 85 42.4
Medtr6g011520 Medicago truncatula HOM05D002545 ORTHO05D002335 6.3e-14 81.3 88 44.3
Medtr7g055907 Medicago truncatula HOM05D000256 ORTHO05D000119 8.3e-14 80.9 91 38.5
Medtr4g052370 Medicago truncatula HOM05D002545 ORTHO05D002335 1.1e-13 80.5 77 50.6
Lalb_Chr21g0309771 Lupinus albus HOM05D000003 ORTHO05D000004 4.1e-13 78.6 100 39.0
Medtr0019s0080 Medicago truncatula HOM05D002545 ORTHO05D002335 5.4e-13 78.2 88 43.2
Medtr6g034090 Medicago truncatula HOM05D002545 ORTHO05D002335 9.2e-13 77.4 81 45.7
Medtr8g102735 Medicago truncatula HOM05D002545 ORTHO05D002335 1.6e-12 76.6 79 49.4
Medtr6g016175 Medicago truncatula HOM05D000003 ORTHO05D000006 2.7e-12 75.9 58 62.1
Medtr3g051920 Medicago truncatula HOM05D002545 ORTHO05D002335 3.5e-12 75.5 102 40.2
Medtr1g014988 Medicago truncatula HOM05D002545 ORTHO05D002335 5.9e-12 74.7 76 42.1
Medtr1g044185 Medicago truncatula HOM05D002545 ORTHO05D002335 5.9e-12 74.7 90 41.1
Medtr1g032320 Medicago truncatula HOM05D000003 ORTHO05D000004 1.3e-11 73.6 86 37.2
Medtr3g023500 Medicago truncatula HOM05D002545 ORTHO05D002335 1.3e-11 73.6 90 42.2
Medtr1g070315 Medicago truncatula HOM05D002545 ORTHO05D002335 5.0e-11 71.6 100 39.0
Medtr4g005490 Medicago truncatula HOM05D002545 ORTHO05D002335 5.0e-11 71.6 60 53.3
Medtr7g073570 Medicago truncatula HOM05D000003 ORTHO05D000004 1.1e-10 70.5 105 41.0
Medtr5g082820 Medicago truncatula HOM05D002545 ORTHO05D002335 3.3e-10 68.9 51 58.8
Lalb_Chr14g0368231 Lupinus albus HOM05D000003 ORTHO05D000004 7.3e-10 67.8 108 34.3
Medtr4g113395 Medicago truncatula HOM05D002545 ORTHO05D002335 9.5e-10 67.4 67 41.8
Medtr3g451530 Medicago truncatula HOM05D002545 ORTHO05D002335 1.6e-09 66.6 57 50.9
Medtr2g048730 Medicago truncatula HOM05D002545 ORTHO05D002335 2.8e-09 65.9 77 40.3
Cpa.g.sc2.342 Carica papaya HOM05D000003 ORTHO05D000004 3.6e-09 65.5 117 35.9
Medtr1g035030 Medicago truncatula HOM05D002545 ORTHO05D002335 3.6e-09 65.5 87 39.1
Medtr3g093740 Medicago truncatula HOM05D002545 ORTHO05D002335 3.6e-09 65.5 72 41.7
Lalb_Chr07g0183091 Lupinus albus HOM05D000003 ORTHO05D000004 6.1e-09 64.7 108 37.0
QL05p058391 Quercus lobata HOM05D004997 ORTHO05D005921 6.1e-09 64.7 103 35.9
QL12p004433 Quercus lobata HOM05D004277 ORTHO05D005148 8.0e-09 64.3 103 36.9
Medtr0061s0090 Medicago truncatula HOM05D000003 ORTHO05D000004 1.0e-08 63.9 50 58.0
Medtr3g435820 Medicago truncatula HOM05D000003 ORTHO05D000004 1.0e-08 63.9 105 35.2
Medtr8g442450 Medicago truncatula HOM05D000003 ORTHO05D002335 1.4e-08 63.5 45 64.4
QL01p048042 Quercus lobata HOM05D001672 ORTHO05D000004 1.8e-08 63.2 105 38.1
HanXRQChr08g0217951 Helianthus annuus HOM05D000003 ORTHO05D000004 2.3e-08 62.8 104 32.7
Medtr7g050660 Medicago truncatula HOM05D002545 ORTHO05D000004 2.3e-08 62.8 55 52.7
Medtr8g024270 Medicago truncatula HOM05D002545 ORTHO05D002335 2.3e-08 62.8 38 68.4
Medtr8g069860 Medicago truncatula HOM05D000003 ORTHO05D002335 2.3e-08 62.8 103 33.0
TPR.G17841 Trifolium pratense HOM05D001331 ORTHO05D001157 3.1e-08 62.4 79 41.8
HanXRQChr17g0535871 Helianthus annuus HOM05D000003 ORTHO05D000004 4.0e-08 62.0 104 32.7
CSS0007080 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 6.8e-08 61.2 139 31.7
Medtr3g063440 Medicago truncatula HOM05D002545 ORTHO05D002335 6.8e-08 61.2 107 28.0
QL10p033727 Quercus lobata HOM05D006388 ORTHO05D008026 6.8e-08 61.2 103 35.9
Cpa.g.sc173.19 Carica papaya HOM05D000003 ORTHO05D000004 8.9e-08 60.8 101 31.7
Medtr3g068195 Medicago truncatula HOM05D002545 ORTHO05D000006 8.9e-08 60.8 61 47.5
Medtr5g090360 Medicago truncatula HOM05D014357 ORTHO05D002335 8.9e-08 60.8 62 43.5
PGSC0003DMG400016171 Solanum tuberosum HOM05D000003 ORTHO05D000004 1.2e-07 60.5 105 30.5
Medtr5g075000 Medicago truncatula HOM05D002545 ORTHO05D002335 2.0e-07 59.7 52 55.8
SHI45326 Sapria himalayana HOM05D000003 ORTHO05D000004 2.0e-07 59.7 106 31.1
SHI47243 Sapria himalayana HOM05D000003 ORTHO05D000004 2.0e-07 59.7 106 31.1
Medtr8g037280 Medicago truncatula HOM05D000003 ORTHO05D000004 2.6e-07 59.3 104 31.7
TPR.G40382 Trifolium pratense HOM05D000003 ORTHO05D000004 2.6e-07 59.3 109 33.9
HanXRQChr05g0151751 Helianthus annuus HOM05D000003 ORTHO05D000004 3.4e-07 58.9 122 30.3
PSO675G3943 Papaver somniferum HOM05D000003 ORTHO05D000004 3.4e-07 58.9 106 33.0
QL02p091725 Quercus lobata HOM05D000399 ORTHO05D000304 3.4e-07 58.9 99 36.4
CSS0025653 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.4e-07 58.5 108 35.2
Medtr7g081765 Medicago truncatula HOM05D002545 ORTHO05D002335 4.4e-07 58.5 88 36.4
QL05p086823 Quercus lobata HOM05D000003 ORTHO05D000004 4.4e-07 58.5 99 34.3
QL10p005473 Quercus lobata HOM05D000230 ORTHO05D000176 4.4e-07 58.5 123 32.5
Cpa.g.sc30.107 Carica papaya HOM05D000003 ORTHO05D000004 5.8e-07 58.2 96 32.3
ECA232G4624 Erigeron canadensis HOM05D000003 ORTHO05D000004 5.8e-07 58.2 103 32.0
QL10p034885 Quercus lobata HOM05D004012 ORTHO05D000004 5.8e-07 58.2 100 35.0
Cpa.g.sc1.146 Carica papaya HOM05D000003 ORTHO05D000004 7.5e-07 57.8 107 31.8
QL02p033301 Quercus lobata HOM05D000003 ORTHO05D000004 7.5e-07 57.8 103 35.0
QL11p032628 Quercus lobata HOM05D002228 ORTHO05D002347 7.5e-07 57.8 105 32.4
QL12p026404 Quercus lobata HOM05D000003 ORTHO05D000004 7.5e-07 57.8 99 34.3
MBI04_g23905_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 9.8e-07 57.4 100 32.0
QL06p025333 Quercus lobata HOM05D002747 ORTHO05D003069 9.8e-07 57.4 99 33.3
QL08p060724 Quercus lobata HOM05D000003 ORTHO05D000004 9.8e-07 57.4 108 31.5
Medtr0048s0160 Medicago truncatula HOM05D002545 ORTHO05D002335 1.3e-06 57.0 39 56.4
Medtr8g079000 Medicago truncatula HOM05D002545 ORTHO05D002335 1.3e-06 57.0 52 48.1
Cpa.g.sc1.274 Carica papaya HOM05D000003 ORTHO05D000004 1.7e-06 56.6 121 33.1
Medtr0376s0020 Medicago truncatula HOM05D000181 ORTHO05D003134 1.7e-06 56.6 61 44.3
PSO210G2794 Papaver somniferum HOM05D000003 ORTHO05D000004 1.7e-06 56.6 103 28.2
PSO675G9317 Papaver somniferum HOM05D000003 ORTHO05D000004 1.7e-06 56.6 124 27.4
Atru.chr6.162 Acer truncatum HOM05D000003 ORTHO05D000004 2.2e-06 56.2 120 28.3
SHI14108 Sapria himalayana HOM05D002164 ORTHO05D000004 2.2e-06 56.2 106 30.2
Cpa.g.sc92.79 Carica papaya HOM05D000003 ORTHO05D000004 2.9e-06 55.8 103 32.0
PSO349G0279 Papaver somniferum HOM05D000003 ORTHO05D000004 2.9e-06 55.8 124 30.6
Aqoxy1G02814 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 3.7e-06 55.5 103 30.1
CSS0000411 Camellia sinensis var. sinensis HOM05D003001 ORTHO05D000004 3.7e-06 55.5 124 33.9
CSS0013093 Camellia sinensis var. sinensis HOM05D003001 ORTHO05D000004 3.7e-06 55.5 124 33.9
MBI06_g06691_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 3.7e-06 55.5 102 33.3
Medtr8g020830 Medicago truncatula HOM05D002545 ORTHO05D002335 3.7e-06 55.5 47 46.8
PGSC0003DMG402011647 Solanum tuberosum HOM05D002779 ORTHO05D003074 3.7e-06 55.5 98 30.6
Cpa.g.sc201.13 Carica papaya HOM05D000003 ORTHO05D000004 6.4e-06 54.7 107 32.7
Medtr1g015430 Medicago truncatula HOM05D000963 ORTHO05D010658 6.4e-06 54.7 41 61.0
Medtr4g060705 Medicago truncatula HOM05D002545 ORTHO05D002335 6.4e-06 54.7 67 38.8
Medtr6g037960 Medicago truncatula HOM05D002545 ORTHO05D002335 6.4e-06 54.7 53 47.2
ECA236G0216 Erigeron canadensis HOM05D000003 ORTHO05D000004 8.3e-06 54.3 105 28.6
PSO724G0020 Papaver somniferum HOM05D000003 ORTHO05D000004 8.3e-06 54.3 105 29.5


User provided reference genes

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