Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G29221 Trifolium pratense HOM05D008175 ORTHO05D010403 1.2e-146 523.1 258 100.0
TPR.G3814 Trifolium pratense HOM05D008175 ORTHO05D010403 9.8e-112 407.1 275 78.5
Medtr7g095350 Medicago truncatula HOM05D008175 ORTHO05D010403 7.3e-75 284.6 261 58.2
Medtr6g013380 Medicago truncatula HOM05D008175 ORTHO05D010403 2.6e-64 249.6 260 54.2
Medtr6g013240 Medicago truncatula HOM05D008175 ORTHO05D010403 1.7e-63 246.9 260 53.8
TPR.G4066 Trifolium pratense HOM05D008175 ORTHO05D010403 5.5e-62 241.9 273 52.7
Medtr3g009910 Medicago truncatula HOM05D008175 ORTHO05D010403 6.7e-60 235.0 284 49.3
Medtr7g095560 Medicago truncatula HOM05D008175 ORTHO05D010403 3.3e-59 232.6 282 48.9
Psat0s1930g0040 Pisum sativum HOM05D008175 ORTHO05D010403 2.9e-55 219.5 269 49.8
Medtr7g105980 Medicago truncatula HOM05D008175 ORTHO05D010403 5.5e-54 215.3 252 50.8
Medtr6g471290 Medicago truncatula HOM05D008175 ORTHO05D010403 1.6e-53 213.8 276 47.1
Medtr7g087840 Medicago truncatula HOM05D008175 ORTHO05D010403 1.9e-51 206.8 271 47.6
Medtr7g087040 Medicago truncatula HOM05D008175 ORTHO05D010403 1.3e-50 204.1 267 46.8
Medtr0176s0050 Medicago truncatula HOM05D008175 ORTHO05D010403 1.2e-48 197.6 259 46.3
Psat3g047200 Pisum sativum HOM05D008175 ORTHO05D010403 2.0e-48 196.8 270 43.7
Medtr6g071510 Medicago truncatula HOM05D008175 ORTHO05D010403 1.3e-39 167.5 271 40.2
Medtr7g089610 Medicago truncatula HOM05D008175 ORTHO05D010403 7.9e-37 158.3 182 53.8
Medtr7g092110 Medicago truncatula HOM05D008175 ORTHO05D010403 2.0e-32 143.7 110 65.5
TPR.G7092 Trifolium pratense HOM05D008175 ORTHO05D010403 2.0e-32 143.7 70 94.3
Medtr2g064400 Medicago truncatula HOM05D008175 ORTHO05D010403 1.0e-31 141.4 269 37.5
TPR.G20352 Trifolium pratense HOM05D008175 ORTHO05D010403 8.5e-31 138.3 150 51.3
Psat1g038560 Pisum sativum HOM05D008175 ORTHO05D010403 6.1e-29 132.1 140 53.6
Medtr5g024120 Medicago truncatula HOM05D008175 ORTHO05D010403 7.9e-29 131.7 248 38.7
Medtr2g032920 Medicago truncatula HOM05D008175 ORTHO05D010403 1.4e-28 131.0 126 58.7
Psat0s1584g0040 Pisum sativum HOM05D008175 ORTHO05D010403 6.7e-28 128.6 183 45.9
Medtr7g092650 Medicago truncatula HOM05D008175 ORTHO05D010403 2.4e-25 120.2 121 53.7
Medtr7g089620 Medicago truncatula HOM05D008175 ORTHO05D010403 2.6e-24 116.7 127 53.5
Medtr7g089570 Medicago truncatula HOM05D008175 ORTHO05D010403 3.5e-24 116.3 127 53.5
TPR.G24323 Trifolium pratense HOM05D008175 ORTHO05D010403 3.8e-23 112.8 120 48.3
Medtr4g057860 Medicago truncatula HOM05D008175 ORTHO05D010403 8.0e-21 105.1 101 55.4
TPR.G24315 Trifolium pratense HOM05D008175 ORTHO05D010403 1.0e-20 104.8 86 59.3
Medtr6g471300 Medicago truncatula HOM05D008175 ORTHO05D010403 2.0e-19 100.5 142 44.4
Medtr7g092645 Medicago truncatula HOM05D008175 ORTHO05D010403 1.0e-15 88.2 72 59.7
Ca_26228_v3 Cicer arietinum L. HOM05D008175 ORTHO05D010403 5.0e-15 85.9 164 37.8
Medtr7g089617 Medicago truncatula HOM05D008175 ORTHO05D010403 1.9e-14 84.0 85 54.1
Medtr6g071680 Medicago truncatula HOM05D008175 ORTHO05D010403 2.5e-14 83.6 76 53.9
Medtr7g105520 Medicago truncatula HOM05D008175 ORTHO05D010403 1.2e-13 81.3 108 48.1
Medtr7g111100 Medicago truncatula HOM05D008175 ORTHO05D010403 1.6e-13 80.9 68 58.8
Rhsim05G0090700 Rhododendron simsii HOM05D000576 ORTHO05D015329 1.6e-13 80.9 206 31.6
Medtr7g095660 Medicago truncatula HOM05D008175 ORTHO05D010403 2.1e-13 80.5 99 46.5
FAN14G2376 Fragaria x ananassa HOM05D000576 ORTHO05D000368 1.8e-12 77.4 247 27.9
FAN14G0812 Fragaria x ananassa HOM05D000576 ORTHO05D000368 4.0e-12 76.3 254 28.7
TPR.G19117 Trifolium pratense HOM05D008175 ORTHO05D010403 5.2e-12 75.9 53 69.8
CSS0031751 Camellia sinensis var. sinensis HOM05D000576 ORTHO05D000368 2.0e-11 73.9 239 28.0
Ca_01871_v3 Cicer arietinum L. HOM05D008175 ORTHO05D010403 3.4e-11 73.2 144 36.8
Actinidia07081 Actinidia chinensis HOM05D000576 ORTHO05D000368 1.7e-10 70.9 254 26.0
FAN05G3417 Fragaria x ananassa HOM05D008847 ORTHO05D000368 4.8e-10 69.3 258 26.0
TPR.G24325 Trifolium pratense HOM05D008175 ORTHO05D010403 7.0e-09 65.5 57 56.1
FAN09G3608 Fragaria x ananassa HOM05D000576 ORTHO05D000368 2.2e-07 60.5 245 25.3
Migut.C01282 Erythranthe guttata HOM05D000576 ORTHO05D000368 2.9e-07 60.1 205 26.3
FvH4_6g47821 Fragaria vesca HOM05D000576 ORTHO05D000368 3.8e-07 59.7 249 25.7
Psat7g057400 Pisum sativum HOM05D008175 ORTHO05D010403 6.5e-07 58.9 98 36.7
RcHm_v2.0_Chr3g0476161 Rosa chinensis HOM05D000576 ORTHO05D000368 1.1e-06 58.2 248 23.8
RcHm_v2.0_Chr5g0047501 Rosa chinensis HOM05D008847 ORTHO05D000368 1.5e-06 57.8 254 23.6
Psat4g068680 Pisum sativum HOM05D008175 ORTHO05D010403 1.9e-06 57.4 116 36.2
TPR.G7001 Trifolium pratense HOM05D009500 ORTHO05D000368 1.9e-06 57.4 231 26.4
Sabra17G0081300 Salix brachista HOM05D000576 ORTHO05D000368 4.2e-06 56.2 248 25.0
Migut.C01162 Erythranthe guttata HOM05D000576 ORTHO05D000368 7.2e-06 55.5 252 23.4


User provided reference genes

Program Settings