Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G2907 Trifolium pratense HOM05D003040 ORTHO05D003443 2.4e-41 171.8 90 100.0
TPR.G2917 Trifolium pratense HOM05D003040 ORTHO05D003443 9.5e-38 159.8 85 95.3
Psat3g189120 Pisum sativum HOM05D003040 ORTHO05D003443 5.2e-28 127.5 85 77.6
Medtr7g021660 Medicago truncatula HOM05D003040 ORTHO05D003443 5.8e-27 124.0 88 77.3
Lj1g0021745 Lotus japonicus HOM05D003040 ORTHO05D003443 7.6e-19 97.1 88 63.6
Glyma.08G259300 Glycine max HOM05D003040 ORTHO05D003443 2.2e-18 95.5 90 62.2
arahy.Tifrunner.gnm1.ann1.D458E1 Arachis hypogaea HOM05D003040 ORTHO05D003443 2.5e-14 82.0 98 58.2
arahy.Tifrunner.gnm1.ann1.EIQ915 Arachis hypogaea HOM05D003040 ORTHO05D003443 2.5e-14 82.0 98 58.2
Lalb_Chr10g0092111 Lupinus albus HOM05D003040 ORTHO05D003443 3.3e-14 81.6 89 57.3
CiPaw.01G109100 Carya illinoinensis HOM05D003040 ORTHO05D003443 3.6e-13 78.2 87 49.4
Phvul.008G018000 Phaseolus vulgaris HOM05D003040 ORTHO05D003443 2.4e-12 75.5 86 52.3
VMungo1383G1471 Vigna mungo HOM05D003040 ORTHO05D003443 9.0e-12 73.6 85 51.8
Nn1g09813 Nelumbo nucifera HOM05D003040 ORTHO05D003443 3.4e-11 71.6 85 47.1
Haze_11716 Corylus avellana HOM05D003040 ORTHO05D003443 7.6e-11 70.5 88 47.7
TAR636G3649 Trochodendron aralioides HOM05D003040 ORTHO05D003443 7.6e-11 70.5 87 48.3
Actinidia35925 Actinidia chinensis HOM05D003040 ORTHO05D003443 1.7e-10 69.3 90 45.6
Potri.002G233400 Populus trichocarpa HOM05D003040 ORTHO05D003443 1.7e-10 69.3 89 46.1
Sabra02G0178100 Salix brachista HOM05D003040 ORTHO05D003443 2.9e-10 68.6 92 46.7
Potri.014G147000 Populus trichocarpa HOM05D003040 ORTHO05D003443 1.1e-09 66.6 89 46.1
Dinv22709 Davidia involucrata HOM05D003040 ORTHO05D003443 1.9e-09 65.9 86 41.9
Duzib268G1117 Durio zibethinus HOM05D003040 ORTHO05D003443 1.9e-09 65.9 87 44.8
Haze_04549 Corylus avellana HOM05D003040 ORTHO05D003443 3.2e-09 65.1 85 38.8
vmacro00570 Vaccinium macrocarpon HOM05D003040 ORTHO05D003443 3.2e-09 65.1 88 37.5
Aqoxy2G04067 Aquilegia oxysepala HOM05D003040 ORTHO05D003443 4.2e-09 64.7 86 41.9
Duzib268G1790 Durio zibethinus HOM05D003040 ORTHO05D003443 4.2e-09 64.7 86 43.0
Hma1.2p1_0412F.1_g147250 Hydrangea macrophylla HOM05D003040 ORTHO05D003443 5.4e-09 64.3 86 45.3
Thecc.04G192600 Theobroma cacao HOM05D003040 ORTHO05D003443 9.3e-09 63.5 86 46.5
Actinidia32963 Actinidia chinensis HOM05D003040 ORTHO05D003443 2.7e-08 62.0 90 46.7
Rhsim09G0035800 Rhododendron simsii HOM05D003040 ORTHO05D003443 4.6e-08 61.2 90 40.0
COL.COLO4_05703 Corchorus olitorius HOM05D003040 ORTHO05D003443 6.0e-08 60.8 88 44.3
Lj3A380G19 Lonicera japonica HOM05D003040 ORTHO05D003443 1.0e-07 60.1 91 39.6
QL10p044472 Quercus lobata HOM05D003040 ORTHO05D003443 2.3e-07 58.9 88 46.6
AUR62000315 Chenopodium quinoa HOM05D000001 ORTHO05D010091 3.0e-07 58.5 89 40.4
Dinv09885 Davidia involucrata HOM05D003040 ORTHO05D003443 5.1e-07 57.8 89 38.2
QL01p048572 Quercus lobata HOM05D003040 ORTHO05D003443 5.1e-07 57.8 92 39.1
Sc25g0005640 Simmondsia chinensis HOM05D003040 ORTHO05D003443 5.1e-07 57.8 84 38.1
Glyma.18G283500 Glycine max HOM05D003040 ORTHO05D003443 6.6e-07 57.4 52 55.8
Dinv29107 Davidia involucrata HOM05D003040 ORTHO05D003443 1.5e-06 56.2 89 39.3
Hund07342 Selenicereus undatus HOM05D003040 ORTHO05D003443 1.9e-06 55.8 89 37.1
Sc16g0010350 Simmondsia chinensis HOM05D003040 ORTHO05D003443 1.9e-06 55.8 89 37.1
GSVIVG01019115001 Vitis vinifera HOM05D003040 ORTHO05D003443 1.9e-06 55.8 84 40.5
Duzib128G0697 Durio zibethinus HOM05D003040 ORTHO05D003443 2.5e-06 55.5 88 39.8
EL10Ac4g09973 Beta vulgaris HOM05D003040 ORTHO05D003443 4.3e-06 54.7 96 35.4
Oeu007221.1 Olea europaea HOM05D003040 ORTHO05D003443 4.3e-06 54.7 92 38.0
Eucgr.H01387 Eucalyptus grandis HOM05D003040 ORTHO05D003443 7.3e-06 53.9 98 34.7
Prupe.1G177300 Prunus persica HOM05D003040 ORTHO05D003443 7.3e-06 53.9 89 36.0
Potri.013G086600 Populus trichocarpa HOM05D003040 ORTHO05D003443 9.6e-06 53.5 88 36.4


User provided reference genes

Program Settings