Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G28910 Trifolium pratense HOM05D006085 ORTHO05D007559 2.7e-31 137.9 64 100.0
VMungo1127G1010 Vigna mungo HOM05D006085 ORTHO05D007559 7.0e-27 123.2 63 87.3
CANSAT64G0553 Cannabis sativa HOM05D006085 ORTHO05D007559 1.6e-26 122.1 63 87.3
Glyma.06G290500 Glycine max HOM05D006085 ORTHO05D007559 1.6e-26 122.1 63 87.3
Ca_18934_v3 Cicer arietinum L. HOM05D006085 ORTHO05D007559 2.0e-26 121.7 63 85.7
Psat7g168600 Pisum sativum HOM05D006085 ORTHO05D007559 3.5e-26 120.9 62 87.1
Glyma.12G116400 Glycine max HOM05D006085 ORTHO05D007559 1.0e-25 119.4 63 84.1
Phvul.011G125900 Phaseolus vulgaris HOM05D006085 ORTHO05D007559 1.0e-25 119.4 63 82.5
Medtr4g078555 Medicago truncatula HOM05D006085 ORTHO05D007559 1.3e-25 119.0 63 85.7
Manes.13G147400 Manihot esculenta HOM05D006085 ORTHO05D007559 2.3e-25 118.2 63 79.4
Lj3g0015664 Lotus japonicus HOM05D006085 ORTHO05D007559 6.6e-25 116.7 63 82.5
arahy.Tifrunner.gnm1.ann1.RY71RI Arachis hypogaea HOM05D006085 ORTHO05D007559 8.6e-25 116.3 63 82.5
Manes.13G145813 Manihot esculenta HOM05D006085 ORTHO05D007559 8.6e-25 116.3 63 77.8
THA.LOC104804055 Tarenaya hassleriana HOM05D006085 ORTHO05D007559 1.1e-24 115.9 62 80.6
arahy.Tifrunner.gnm1.ann1.9UNY9A Arachis hypogaea HOM05D006085 ORTHO05D007559 1.5e-24 115.5 63 82.5
arahy.Tifrunner.gnm1.ann1.UWD03M Arachis hypogaea HOM05D006085 ORTHO05D007559 1.5e-24 115.5 63 82.5
RcHm_v2.0_Chr2g0127641 Rosa chinensis HOM05D006085 ORTHO05D007559 1.5e-24 115.5 63 81.0
TPR.G6860 Trifolium pratense HOM05D006085 ORTHO05D007559 1.5e-24 115.5 62 88.7
Lalb_Chr19g0135161 Lupinus albus HOM05D006085 ORTHO05D007559 1.9e-24 115.2 63 81.0
Potri.007G139000 Populus trichocarpa HOM05D006085 ORTHO05D007559 1.9e-24 115.2 63 81.0
Manes.13G145916 Manihot esculenta HOM05D006085 ORTHO05D007559 2.5e-24 114.8 63 76.2
Prupe.3G189400 Prunus persica HOM05D006085 ORTHO05D007559 2.5e-24 114.8 63 81.0
BcaC07g41200 Brassica carinata HOM05D006085 ORTHO05D007559 3.3e-24 114.4 61 82.0
C08p42090 Brassica napus HOM05D006085 ORTHO05D007559 3.3e-24 114.4 61 82.0
BolC8t51769H Brassica oleracea HOM05D006085 ORTHO05D007559 3.3e-24 114.4 61 82.0
Sabra07G0112000 Salix brachista HOM05D006085 ORTHO05D007559 3.3e-24 114.4 63 81.0
AL3G53720 Arabidopsis lyrata HOM05D006085 ORTHO05D007559 4.3e-24 114.0 61 82.0
BcaB08g34934 Brassica carinata HOM05D006085 ORTHO05D007559 4.3e-24 114.0 61 82.0
A09p58770 Brassica napus HOM05D006085 ORTHO05D007559 4.3e-24 114.0 61 82.0
BraA09t41263Z Brassica rapa HOM05D006085 ORTHO05D007559 4.3e-24 114.0 61 82.0
Cpa.g.sc83.67 Carica papaya HOM05D006085 ORTHO05D007559 4.3e-24 114.0 63 79.4
Manes.13G145816 Manihot esculenta HOM05D006085 ORTHO05D007559 4.3e-24 114.0 62 77.4
Sp3g33890 Schrenkiella parvula HOM05D006085 ORTHO05D007559 4.3e-24 114.0 61 82.0
Thecc.02G182800 Theobroma cacao HOM05D006085 ORTHO05D007559 4.3e-24 114.0 63 79.4
AT2G20635 Arabidopsis thaliana HOM05D006085 ORTHO05D007559 5.6e-24 113.6 61 82.0
arahy.Tifrunner.gnm1.ann1.C4PCKW Arachis hypogaea HOM05D006085 ORTHO05D007559 5.6e-24 113.6 63 81.0
Gohir.A13G055500 Gossypium hirsutum HOM05D006085 ORTHO05D007559 5.6e-24 113.6 63 79.4
Gohir.D13G066600 Gossypium hirsutum HOM05D006085 ORTHO05D007559 5.6e-24 113.6 63 79.4
Gorai.013G075800 Gossypium raimondii HOM05D006085 ORTHO05D007559 5.6e-24 113.6 63 79.4
Carub.0003s3516 Capsella rubella HOM05D006085 ORTHO05D007559 7.3e-24 113.2 61 82.0
COL.COLO4_05950 Corchorus olitorius HOM05D006085 ORTHO05D007559 7.3e-24 113.2 63 77.8
TAR626G0071 Trochodendron aralioides HOM05D006085 ORTHO05D007559 9.5e-24 112.8 63 76.2
MELO3C018706.2 Cucumis melo HOM05D006085 ORTHO05D007559 1.2e-23 112.5 62 75.8
Thhalv10001957m.g Eutrema salsugineum HOM05D006085 ORTHO05D007559 1.2e-23 112.5 61 80.3
FvH4_6g26520 Fragaria vesca HOM05D006085 ORTHO05D007559 1.2e-23 112.5 63 79.4
CARHR111290 Cardamine hirsuta HOM05D006085 ORTHO05D007559 2.1e-23 111.7 61 80.3
Duzib052G1056 Durio zibethinus HOM05D006085 ORTHO05D007559 2.1e-23 111.7 63 76.2
Ciclev10014891m.g Citrus clementina HOM05D006085 ORTHO05D007559 2.8e-23 111.3 63 77.8
Sed0017729 Sechium edule HOM05D006085 ORTHO05D007559 2.8e-23 111.3 63 74.6
FAN02G0764 Fragaria x ananassa HOM05D006085 ORTHO05D007559 3.6e-23 110.9 63 77.8
TWI59G1154 Tripterygium wilfordii HOM05D006085 ORTHO05D007559 3.6e-23 110.9 63 77.8
Nn1g04152 Nelumbo nucifera HOM05D006085 ORTHO05D007559 6.1e-23 110.2 62 75.8
Aa31LG8G17530 Aethionema arabicum HOM05D006085 ORTHO05D007559 8.0e-23 109.8 61 77.0
Hund01031 Selenicereus undatus HOM05D006085 ORTHO05D007559 8.0e-23 109.8 63 74.6
ClCG07G002490 Citrullus lanatus HOM05D006085 ORTHO05D007559 1.8e-22 108.6 62 74.2
CsaV3_7G005870 Cucumis sativus L. HOM05D006085 ORTHO05D007559 2.3e-22 108.2 62 74.2
GSVIVG01020577001 Vitis vinifera HOM05D006085 ORTHO05D007559 2.3e-22 108.2 62 77.4
CSS0044112 Camellia sinensis var. sinensis HOM05D006085 ORTHO05D007559 4.0e-22 107.5 63 76.2
QL08p039688 Quercus lobata HOM05D006085 ORTHO05D007559 4.0e-22 107.5 62 79.0
AUR62038975 Chenopodium quinoa HOM05D006085 ORTHO05D007559 5.2e-22 107.1 63 74.6
Zm00001eb322380 Zea mays HOM05D006085 ORTHO05D007559 5.2e-22 107.1 61 73.8
Haze_13204 Corylus avellana HOM05D006085 ORTHO05D007559 6.8e-22 106.7 63 74.6
MD17G1236100 Malus domestica HOM05D006085 ORTHO05D007559 8.9e-22 106.3 62 77.4
Rhsim06G0139100 Rhododendron simsii HOM05D006085 ORTHO05D007559 1.2e-21 105.9 63 73.0
AUR62038885 Chenopodium quinoa HOM05D006085 ORTHO05D007559 1.5e-21 105.5 63 73.0
Actinidia30466 Actinidia chinensis HOM05D006085 ORTHO05D007559 2.0e-21 105.1 63 74.6
CiPaw.03G179300 Carya illinoinensis HOM05D006085 ORTHO05D007559 2.0e-21 105.1 63 73.0
Migut.M00167 Erythranthe guttata HOM05D006085 ORTHO05D007559 2.0e-21 105.1 62 77.4
SGA_v2.0_scaffold70G23511 Striga asiatica HOM05D006085 ORTHO05D007559 2.6e-21 104.8 62 74.2
Prupe.3G139600 Prunus persica HOM05D006085 ORTHO05D007559 3.4e-21 104.4 63 74.6
Atru.chr6.2894 Acer truncatum HOM05D006085 ORTHO05D007559 4.4e-21 104.0 63 71.4
CDE04G1826 Ceratophyllum demersum HOM05D006085 ORTHO05D007559 4.4e-21 104.0 63 68.3
Eucgr.A01834 Eucalyptus grandis HOM05D006085 ORTHO05D007559 5.7e-21 103.6 62 75.8
PGR042G2089 Punica granatum HOM05D006085 ORTHO05D007559 7.5e-21 103.2 62 74.2
Manes.13G145812 Manihot esculenta HOM05D006085 ORTHO05D007559 9.8e-21 102.8 62 71.0
Aqoxy1G02363 Aquilegia oxysepala HOM05D006085 ORTHO05D007559 1.3e-20 102.4 63 66.7
Oeu036070.3 Olea europaea HOM05D006085 ORTHO05D007559 1.7e-20 102.1 62 74.2
Os07g0508500 Oryza sativa ssp. japonica HOM05D006085 ORTHO05D007559 1.7e-20 102.1 61 70.5
Sc12g0003150 Simmondsia chinensis HOM05D006085 ORTHO05D007559 2.9e-20 101.3 63 69.8
vmacro12328 Vaccinium macrocarpon HOM05D006085 ORTHO05D007559 2.9e-20 101.3 63 71.4
Peaxi162Scf00981g00430 Petunia axillaris HOM05D006085 ORTHO05D007559 3.7e-20 100.9 62 74.2
MBI18_g34208_MAGBIO Magnolia biondii HOM05D006085 ORTHO05D007559 6.4e-20 100.1 58 74.1
MSTRG.15247 Avicennia marina HOM05D006085 ORTHO05D007559 8.3e-20 99.8 62 72.6
Hma1.2p1_0002F.1_g002100 Hydrangea macrophylla HOM05D006085 ORTHO05D007559 1.1e-19 99.4 62 74.2
ATR0217G009 Amborella trichopoda HOM05D006085 ORTHO05D007559 1.4e-19 99.0 62 71.0
Ah.01g015320 Amaranthus hybridus HOM05D006085 ORTHO05D007559 4.1e-19 97.4 62 66.1
Lj8C109T7 Lonicera japonica HOM05D006085 ORTHO05D007559 5.4e-19 97.1 62 71.0
Nitab4.5_0000638g0100 Nicotiana tabacum HOM05D006085 ORTHO05D007559 9.2e-19 96.3 62 72.6
PSO541G4164 Papaver somniferum HOM05D006085 ORTHO05D007559 9.2e-19 96.3 63 66.7
PSO675G5281 Papaver somniferum HOM05D006085 ORTHO05D007559 9.2e-19 96.3 63 66.7
Solyc07g053820.3 Solanum lycopersicum HOM05D006085 ORTHO05D007559 9.2e-19 96.3 62 69.4
Sopen07g027790 Solanum pennellii HOM05D006085 ORTHO05D007559 9.2e-19 96.3 62 69.4
PGSC0003DMG400032825 Solanum tuberosum HOM05D006085 ORTHO05D007559 9.2e-19 96.3 62 69.4
HPP92_014185 Vanilla planifolia HOM05D006085 ORTHO05D007559 2.0e-18 95.1 62 69.4
CAN.G209.32 Capsicum annuum HOM05D006085 ORTHO05D007559 4.6e-18 94.0 62 69.4
Pp3c20_12130 Physcomitrium patens HOM05D006085 ORTHO05D007559 5.9e-18 93.6 59 71.2
Cc05_g07490 Coffea canephora HOM05D006085 ORTHO05D007559 8.6e-17 89.7 62 66.1
DCAR_021253 Daucus carota HOM05D006085 ORTHO05D007559 8.6e-17 89.7 62 64.5
AagrBONN_evm.TU.Sc2ySwM_228.5266 Anthoceros agrestis HOM05D006085 ORTHO05D007559 1.9e-16 88.6 59 64.4
ECA234G4181 Erigeron canadensis HOM05D006085 ORTHO05D007559 2.5e-16 88.2 62 62.9
unitig_21.g20425 Utricularia gibba HOM05D006085 ORTHO05D007559 7.3e-16 86.7 54 70.4
HanXRQChr10g0284071 Helianthus annuus HOM05D006085 ORTHO05D007559 4.7e-15 84.0 61 60.7
Lsat_1_v5_gn_4_66841 Lactuca sativa HOM05D006085 ORTHO05D007559 4.7e-15 84.0 62 59.7
Mapoly0009s0056 Marchantia polymorpha HOM05D006085 ORTHO05D007559 4.0e-14 80.9 59 57.6
MCO16G047 Micromonas commoda HOM05D006085 ORTHO05D007559 1.7e-12 75.5 54 55.6
CBR_g48499 Chara braunii HOM05D006085 ORTHO05D007559 5.4e-11 70.5 59 52.5


User provided reference genes

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