Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G28848 Trifolium pratense HOM05D004438 ORTHO05D005256 3.6e-67 258.1 126 100.0
Medtr1g073620 Medicago truncatula HOM05D004438 ORTHO05D005256 1.4e-63 246.1 125 93.6
Phvul.L002244 Phaseolus vulgaris HOM05D004438 ORTHO05D005256 1.4e-63 246.1 126 95.2
VMungo0720G0202 Vigna mungo HOM05D004438 ORTHO05D005256 1.4e-63 246.1 126 95.2
Lalb_Chr02g0150651 Lupinus albus HOM05D004438 ORTHO05D005256 1.8e-63 245.7 126 93.7
Glyma.01G200000 Glycine max HOM05D004438 ORTHO05D005256 2.4e-63 245.4 124 94.4
Glyma.10G190000 Glycine max HOM05D004438 ORTHO05D005256 5.4e-63 244.2 124 94.4
Lj5g0016992 Lotus japonicus HOM05D004438 ORTHO05D005256 7.0e-63 243.8 126 93.7
Glyma.20G200800 Glycine max HOM05D004438 ORTHO05D005256 3.8e-61 238.0 124 89.5
Psat6g129880 Pisum sativum HOM05D004438 ORTHO05D005256 1.5e-60 236.1 124 88.7
Psat7g208520 Pisum sativum HOM05D004438 ORTHO05D005256 2.5e-60 235.3 126 89.7
MD03G1238400 Malus domestica HOM05D004438 ORTHO05D005256 2.1e-59 232.3 125 90.4
Haze_25054 Corylus avellana HOM05D004438 ORTHO05D005256 2.8e-59 231.9 125 86.4
QL06p031963 Quercus lobata HOM05D004438 ORTHO05D005256 2.8e-59 231.9 125 86.4
Cfa002762 Carpinus fangiana HOM05D004438 ORTHO05D005256 4.7e-59 231.1 125 85.6
Cpa.g.sc21.8 Carica papaya HOM05D004438 ORTHO05D005256 6.1e-59 230.7 126 85.7
Prupe.4G171500 Prunus persica HOM05D004438 ORTHO05D005256 6.1e-59 230.7 125 88.8
Actinidia06107 Actinidia chinensis HOM05D004438 ORTHO05D005256 8.0e-59 230.3 122 86.1
QL01p009111 Quercus lobata HOM05D004438 ORTHO05D005256 8.0e-59 230.3 125 86.4
TWI53G0984 Tripterygium wilfordii HOM05D004438 ORTHO05D005256 1.0e-58 229.9 125 84.0
CARHR278820 Cardamine hirsuta HOM05D004438 ORTHO05D005256 1.4e-58 229.6 124 84.7
AL8G42290 Arabidopsis lyrata HOM05D004438 ORTHO05D005256 1.8e-58 229.2 125 84.0
AT5G64816 Arabidopsis thaliana HOM05D004438 ORTHO05D005256 1.8e-58 229.2 125 84.0
COL.COLO4_11000 Corchorus olitorius HOM05D004438 ORTHO05D005256 1.8e-58 229.2 125 84.8
Duzib187G1770 Durio zibethinus HOM05D004438 ORTHO05D005256 2.3e-58 228.8 125 84.0
RcHm_v2.0_Chr2g0117091 Rosa chinensis HOM05D004438 ORTHO05D005256 2.3e-58 228.8 125 89.6
Rhsim10G0149000 Rhododendron simsii HOM05D004438 ORTHO05D005256 3.0e-58 228.4 122 85.2
Carub.0008s2564 Capsella rubella HOM05D004438 ORTHO05D005256 5.2e-58 227.6 124 84.7
MD15G1340400 Malus domestica HOM05D004438 ORTHO05D005256 5.2e-58 227.6 124 88.7
MD15G1331400 Malus domestica HOM05D004438 ORTHO05D005256 6.8e-58 227.3 126 88.9
Solyc04g051710.2 Solanum lycopersicum HOM05D004438 ORTHO05D005256 8.9e-58 226.9 122 83.6
Sopen04g023090 Solanum pennellii HOM05D004438 ORTHO05D005256 8.9e-58 226.9 122 83.6
THA.LOC104799304 Tarenaya hassleriana HOM05D004438 ORTHO05D005256 8.9e-58 226.9 125 83.2
Thecc.01G114400 Theobroma cacao HOM05D004438 ORTHO05D005256 1.2e-57 226.5 125 84.0
ClCG01G016040 Citrullus lanatus HOM05D004438 ORTHO05D005256 1.5e-57 226.1 125 82.4
Dinv42684 Davidia involucrata HOM05D004438 ORTHO05D005256 1.5e-57 226.1 125 82.4
FvH4_1g22770 Fragaria vesca HOM05D004438 ORTHO05D005256 1.5e-57 226.1 125 88.0
FAN19G1036 Fragaria x ananassa HOM05D004438 ORTHO05D005256 1.5e-57 226.1 125 88.0
FAN23G1009 Fragaria x ananassa HOM05D004438 ORTHO05D005256 1.5e-57 226.1 125 88.0
FAN26G1829 Fragaria x ananassa HOM05D004438 ORTHO05D005256 1.5e-57 226.1 125 88.0
FAN28G0942 Fragaria x ananassa HOM05D004438 ORTHO05D005256 1.5e-57 226.1 125 88.0
MBI11_g03707_MAGBIO Magnolia biondii HOM05D004438 ORTHO05D005256 1.5e-57 226.1 125 84.0
PSO541G1989 Papaver somniferum HOM05D004438 ORTHO05D005256 1.5e-57 226.1 122 85.2
CiPaw.03G133700 Carya illinoinensis HOM05D004438 ORTHO05D005256 2.0e-57 225.7 125 82.4
Gohir.A11G197600 Gossypium hirsutum HOM05D004438 ORTHO05D005256 2.0e-57 225.7 125 81.6
PSO675G7198 Papaver somniferum HOM05D004438 ORTHO05D005256 2.0e-57 225.7 122 85.2
PGSC0003DMG400031197 Solanum tuberosum HOM05D004438 ORTHO05D005256 2.0e-57 225.7 122 82.8
Gohir.A10G084200 Gossypium hirsutum HOM05D004438 ORTHO05D005256 2.6e-57 225.3 126 81.7
Gorai.007G245000 Gossypium raimondii HOM05D004438 ORTHO05D005256 2.6e-57 225.3 125 82.4
Peaxi162Scf00106g00162 Petunia axillaris HOM05D004438 ORTHO05D005256 2.6e-57 225.3 122 82.8
CSS0020413 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 3.4e-57 224.9 122 83.6
Gorai.011G114100 Gossypium raimondii HOM05D004438 ORTHO05D005256 3.4e-57 224.9 126 81.7
A06p31610 Brassica napus HOM05D004438 ORTHO05D005256 4.4e-57 224.6 125 82.4
C03p61350 Brassica napus HOM05D004438 ORTHO05D005256 4.4e-57 224.6 125 82.4
BraA06t26098Z Brassica rapa HOM05D004438 ORTHO05D005256 4.4e-57 224.6 125 82.4
AUR62027160 Chenopodium quinoa HOM05D004438 ORTHO05D005256 5.7e-57 224.2 121 85.1
AUR62044399 Chenopodium quinoa HOM05D004438 ORTHO05D005256 5.7e-57 224.2 121 85.1
Prupe.6G170300 Prunus persica HOM05D004438 ORTHO05D005256 5.7e-57 224.2 124 87.1
MSTRG.9937 Avicennia marina HOM05D004438 ORTHO05D005256 7.5e-57 223.8 125 80.8
Cc10_g15830 Coffea canephora HOM05D004438 ORTHO05D005256 7.5e-57 223.8 125 84.0
Oeu027202.1 Olea europaea HOM05D004438 ORTHO05D005256 7.5e-57 223.8 125 80.8
Gohir.D10G104600 Gossypium hirsutum HOM05D004438 ORTHO05D005256 9.8e-57 223.4 126 81.0
SalBow3G3218 Salvia bowleyana HOM05D004438 ORTHO05D005256 9.8e-57 223.4 122 82.8
BcaB02g09832 Brassica carinata HOM05D004438 ORTHO05D005256 1.3e-56 223.0 124 82.3
BcaC01g02715 Brassica carinata HOM05D004438 ORTHO05D005256 1.3e-56 223.0 124 82.3
BolC3t18395H Brassica oleracea HOM05D004438 ORTHO05D005256 1.3e-56 223.0 124 82.3
CsaV3_6G042320 Cucumis sativus L. HOM05D004438 ORTHO05D005256 1.3e-56 223.0 125 80.8
Sp2g27890 Schrenkiella parvula HOM05D004438 ORTHO05D005256 1.3e-56 223.0 124 82.3
Eucgr.F02140 Eucalyptus grandis HOM05D004438 ORTHO05D005256 1.7e-56 222.6 124 83.1
Dinv19477 Davidia involucrata HOM05D004438 ORTHO05D005256 2.2e-56 222.2 122 82.0
Migut.N00230 Erythranthe guttata HOM05D004438 ORTHO05D005256 2.2e-56 222.2 125 79.2
Gohir.A11G053800 Gossypium hirsutum HOM05D004438 ORTHO05D005256 2.2e-56 222.2 125 79.2
Potri.002G105400 Populus trichocarpa HOM05D004438 ORTHO05D005256 2.2e-56 222.2 125 83.2
SGA_v2.0_scaffold79G25619 Striga asiatica HOM05D004438 ORTHO05D005256 2.9e-56 221.9 125 80.0
CANSAT01G2942 Cannabis sativa HOM05D004438 ORTHO05D005256 3.7e-56 221.5 121 86.8
Gohir.D11G057300 Gossypium hirsutum HOM05D004438 ORTHO05D005256 3.7e-56 221.5 125 79.2
Sed0003177 Sechium edule HOM05D004438 ORTHO05D005256 3.7e-56 221.5 125 81.6
RcHm_v2.0_Chr5g0031621 Rosa chinensis HOM05D000965 ORTHO05D000842 4.9e-56 221.1 125 85.6
Sed0014495 Sechium edule HOM05D004438 ORTHO05D005256 4.9e-56 221.1 125 80.0
TAR625G0091 Trochodendron aralioides HOM05D004438 ORTHO05D005256 4.9e-56 221.1 125 80.8
Gohir.D11G231900 Gossypium hirsutum HOM05D004438 ORTHO05D005256 6.4e-56 220.7 125 81.6
Os03g0185600 Oryza sativa ssp. japonica HOM05D004438 ORTHO05D005256 6.4e-56 220.7 122 83.6
Ah.03g137490 Amaranthus hybridus HOM05D004438 ORTHO05D005256 8.3e-56 220.3 125 78.4
Thhalv10005124m.g Eutrema salsugineum HOM05D004438 ORTHO05D005256 8.3e-56 220.3 124 81.5
Lsat_1_v5_gn_8_150501 Lactuca sativa HOM05D004438 ORTHO05D005256 8.3e-56 220.3 121 86.8
Potri.005G156400 Populus trichocarpa HOM05D004438 ORTHO05D005256 8.3e-56 220.3 121 85.1
TWI74G1039 Tripterygium wilfordii HOM05D004438 ORTHO05D005256 8.3e-56 220.3 119 83.2
Aqoxy2G01099 Aquilegia oxysepala HOM05D004438 ORTHO05D005256 1.1e-55 219.9 125 80.8
Ah.02g126620 Amaranthus hybridus HOM05D004438 ORTHO05D005256 1.4e-55 219.5 125 80.0
TAR381G0625 Trochodendron aralioides HOM05D004438 ORTHO05D005256 1.4e-55 219.5 125 80.8
Zm00001eb006400 Zea mays HOM05D004438 ORTHO05D005256 1.4e-55 219.5 122 82.0
Nitab4.5_0000131g0360 Nicotiana tabacum HOM05D004438 ORTHO05D005256 1.8e-55 219.2 124 81.5
Nitab4.5_0003709g0100 Nicotiana tabacum HOM05D004438 ORTHO05D005256 1.8e-55 219.2 124 81.5
CAN.G344.10 Capsicum annuum HOM05D004438 ORTHO05D005256 3.2e-55 218.4 122 80.3
MELO3C007474.2 Cucumis melo HOM05D004438 ORTHO05D005256 3.2e-55 218.4 125 80.0
DCAR_009568 Daucus carota HOM05D004438 ORTHO05D005256 4.1e-55 218.0 125 80.8
ECA233G2293 Erigeron canadensis HOM05D004438 ORTHO05D005256 4.1e-55 218.0 122 85.2
HanXRQChr12g0372061 Helianthus annuus HOM05D004438 ORTHO05D005256 4.1e-55 218.0 121 85.1
Ciclev10002841m.g Citrus clementina HOM05D004438 ORTHO05D005256 7.0e-55 217.2 124 82.3
HPP92_015825 Vanilla planifolia HOM05D004438 ORTHO05D005256 7.0e-55 217.2 123 80.5
Zm00001eb401580 Zea mays HOM05D004438 ORTHO05D005256 7.0e-55 217.2 122 81.1
THA.LOC104819312 Tarenaya hassleriana HOM05D004438 ORTHO05D005256 9.2e-55 216.9 124 79.0
vmacro18638 Vaccinium macrocarpon HOM05D004438 ORTHO05D005256 9.2e-55 216.9 125 79.2
Peaxi162Scf00979g00008 Petunia axillaris HOM05D004438 ORTHO05D005256 1.2e-54 216.5 124 80.6
TAR625G0287 Trochodendron aralioides HOM05D004438 ORTHO05D005256 2.0e-54 215.7 124 80.6
DCAR_009565 Daucus carota HOM05D004438 ORTHO05D005256 2.7e-54 215.3 125 80.0
SGA_v2.0_scaffold308G48110 Striga asiatica HOM05D004438 ORTHO05D005256 2.7e-54 215.3 121 79.3
Atru.chr13.1020 Acer truncatum HOM05D004438 ORTHO05D005256 3.5e-54 214.9 124 79.8
Lalb_Chr21g0312471 Lupinus albus HOM05D004438 ORTHO05D005256 4.6e-54 214.5 118 87.3
Aa31LG1G17110 Aethionema arabicum HOM05D004438 ORTHO05D005256 7.8e-54 213.8 124 79.0
Nn5g29898 Nelumbo nucifera HOM05D004438 ORTHO05D005256 7.8e-54 213.8 125 80.8
Sopen00g011470 Solanum pennellii HOM05D004438 ORTHO05D005256 2.3e-53 212.2 124 78.2
GSVIVG01009169001 Vitis vinifera HOM05D004438 ORTHO05D005256 2.9e-53 211.8 124 79.8
Nitab4.5_0000184g0290 Nicotiana tabacum HOM05D004438 ORTHO05D005256 3.9e-53 211.5 115 81.7
Sc03g0004400 Simmondsia chinensis HOM05D004438 ORTHO05D005256 3.9e-53 211.5 115 82.6
Solyc04g076260.2 Solanum lycopersicum HOM05D004438 ORTHO05D005256 5.0e-53 211.1 124 78.2
CAN.G475.35 Capsicum annuum HOM05D004438 ORTHO05D005256 6.6e-53 210.7 124 79.0
SalBow2G1806 Salvia bowleyana HOM05D004438 ORTHO05D005256 1.9e-52 209.1 122 79.5
unitig_699.g19132 Utricularia gibba HOM05D004438 ORTHO05D005256 1.9e-52 209.1 126 74.6
PGSC0003DMG400009364 Solanum tuberosum HOM05D004438 ORTHO05D005256 5.6e-52 207.6 124 77.4
Manes.10G131700 Manihot esculenta HOM05D004438 ORTHO05D005256 9.5e-52 206.8 124 76.6
Sc23g0000680 Simmondsia chinensis HOM05D004438 ORTHO05D005256 1.6e-51 206.1 126 77.0
Sabra05G0119900 Salix brachista HOM05D004438 ORTHO05D005256 2.0e-49 199.1 112 83.0
FvH4_3g18771 Fragaria vesca HOM05D004438 ORTHO05D005256 3.4e-49 198.4 115 83.5
Sabra02G0082700 Salix brachista HOM05D004438 ORTHO05D005256 4.4e-49 198.0 112 83.0
Manes.02G145100 Manihot esculenta HOM05D004438 ORTHO05D005256 5.8e-49 197.6 125 78.4
Gorai.007G062500 Gossypium raimondii HOM05D004438 ORTHO05D005256 9.8e-49 196.8 125 73.6
ATR1132G028 Amborella trichopoda HOM05D004438 ORTHO05D005256 1.3e-48 196.4 128 75.8
Nitab4.5_0004977g0040 Nicotiana tabacum HOM05D004438 ORTHO05D005256 1.7e-48 196.1 107 82.2
EL10Ac6g13106 Beta vulgaris HOM05D004438 ORTHO05D005256 4.9e-48 194.5 107 82.2
Nn1g08461 Nelumbo nucifera HOM05D004438 ORTHO05D005256 6.4e-48 194.1 103 89.3
CDE02G2078 Ceratophyllum demersum HOM05D004438 ORTHO05D005256 1.4e-47 193.0 112 79.5
FAN16G1755 Fragaria x ananassa HOM05D004438 ORTHO05D005256 1.4e-47 193.0 109 86.2
TWI56G0149 Tripterygium wilfordii HOM05D004438 ORTHO05D005256 1.7e-45 186.0 125 72.0
Duzib264G0014 Durio zibethinus HOM05D004438 ORTHO05D005256 1.9e-44 182.6 101 83.2
SHI31196 Sapria himalayana HOM05D004438 ORTHO05D005256 1.9e-44 182.6 125 66.4
FAN11G0727 Fragaria x ananassa HOM05D000965 ORTHO05D000842 5.6e-44 181.0 98 87.8
FAN21G3234 Fragaria x ananassa HOM05D000965 ORTHO05D000842 2.8e-43 178.7 98 85.7
Migut.G00404 Erythranthe guttata HOM05D004438 ORTHO05D005256 6.2e-43 177.6 129 67.4
Nitab4.5_0004977g0030 Nicotiana tabacum HOM05D004438 ORTHO05D005256 2.6e-41 172.2 88 87.5
Mapoly0031s0095 Marchantia polymorpha HOM05D004438 ORTHO05D005256 1.7e-40 169.5 123 65.0
Oeu028520.2 Olea europaea HOM05D004438 ORTHO05D005256 2.4e-39 165.6 102 76.5
CSS0036861 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 9.2e-39 163.7 98 77.6
Pp3c22_12110 Physcomitrium patens HOM05D004438 ORTHO05D005256 6.0e-38 161.0 123 61.8
SEGI_36857 Sequoiadendron giganteum HOM05D004438 ORTHO05D005256 2.3e-37 159.1 88 78.4
AagrBONN_evm.TU.Sc2ySwM_117.295 Anthoceros agrestis HOM05D004438 ORTHO05D005256 3.9e-37 158.3 125 57.6
COL.COLO4_35234 Corchorus olitorius HOM05D004438 ORTHO05D005256 8.6e-37 157.1 132 62.1
Rhsim08G0005900 Rhododendron simsii HOM05D004438 ORTHO05D005256 1.1e-36 156.8 102 71.6
Pp3c19_18370 Physcomitrium patens HOM05D004438 ORTHO05D005256 1.1e-31 140.2 119 53.8
Gohir.1Z049407 Gossypium hirsutum HOM05D004438 ORTHO05D005256 1.4e-31 139.8 69 89.9
SEGI_35678 Sequoiadendron giganteum HOM05D004438 ORTHO05D005256 1.4e-31 139.8 125 52.0
AagrBONN_evm.TU.Sc2ySwM_344.1988 Anthoceros agrestis HOM05D004438 ORTHO05D005256 1.6e-30 136.3 121 53.7
arahy.Tifrunner.gnm1.ann1.7JV24P Arachis hypogaea HOM05D004438 ORTHO05D005256 1.6e-27 126.3 57 98.2
CSS0009061 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 7.6e-25 117.5 112 52.7
CSS0034319 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 1.3e-24 116.7 109 55.0
PRCOL_00001176 Prasinoderma coloniale HOM05D004438 ORTHO05D005256 5.4e-23 111.3 77 58.4
ATR0049G041 Amborella trichopoda HOM05D004438 ORTHO05D005256 8.7e-21 104.0 119 43.7
CiPaw.04G091100 Carya illinoinensis HOM05D004438 ORTHO05D005256 1.1e-20 103.6 62 79.0
MCO08G336 Micromonas commoda HOM05D004438 ORTHO05D005256 1.9e-20 102.8 96 51.0
Cre07.g313800 Chlamydomonas reinhardtii HOM05D004438 ORTHO05D005256 4.3e-20 101.7 80 55.0
CSS0036545 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 9.3e-15 84.0 42 88.1
Hund21738 Selenicereus undatus HOM05D004438 ORTHO05D005256 2.1e-11 72.8 35 91.4
SalBow2G3602 Salvia bowleyana HOM05D004438 ORTHO05D005256 1.3e-08 63.5 32 81.2
CBR_g51299 Chara braunii HOM05D004438 ORTHO05D005256 8.4e-08 60.8 35 74.3
SalBow1G8643 Salvia bowleyana HOM05D000379 ORTHO05D000254 1.4e-07 60.1 33 78.8


User provided reference genes

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