Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G28846 Trifolium pratense HOM05D005475 ORTHO05D006575 1.3e-51 206.1 102 100.0
Medtr1g073660 Medicago truncatula HOM05D005475 ORTHO05D006575 5.7e-31 137.5 104 72.1
Psat6g117200 Pisum sativum HOM05D005475 ORTHO05D006575 1.7e-30 136.0 105 72.4
Lj5g0027748 Lotus japonicus HOM05D005475 ORTHO05D006575 1.8e-24 115.9 106 66.0
Glyma.10G136600 Glycine max HOM05D005475 ORTHO05D006575 8.3e-22 107.1 94 62.8
Ca_11926_v3 Cicer arietinum L. HOM05D005475 ORTHO05D006575 3.5e-20 101.7 77 68.8
MD13G1219400 Malus domestica HOM05D005475 ORTHO05D006575 3.5e-20 101.7 104 59.6
VMungo0720G1758 Vigna mungo HOM05D005475 ORTHO05D006575 3.5e-20 101.7 114 54.4
Phvul.007G271300 Phaseolus vulgaris HOM05D005475 ORTHO05D006575 4.5e-20 101.3 95 58.9
MD16G1224800 Malus domestica HOM05D005475 ORTHO05D006575 5.9e-20 100.9 104 58.7
Glyma.20G201100 Glycine max HOM05D005475 ORTHO05D006575 7.8e-20 100.5 114 54.4
Prupe.1G046100 Prunus persica HOM05D005475 ORTHO05D006575 7.8e-20 100.5 104 56.7
Phvul.L002444 Phaseolus vulgaris HOM05D005475 ORTHO05D006575 1.0e-19 100.1 110 54.5
Psat6g107160 Pisum sativum HOM05D005475 ORTHO05D006575 1.7e-19 99.4 104 54.8
TWI73G1305 Tripterygium wilfordii HOM05D005475 ORTHO05D006575 1.1e-18 96.7 100 58.0
Glyma.10G189800 Glycine max HOM05D005475 ORTHO05D006575 4.3e-18 94.7 114 54.4
CiPaw.01G179400 Carya illinoinensis HOM05D005475 ORTHO05D006575 6.1e-17 90.9 83 60.2
Gorai.005G053100 Gossypium raimondii HOM05D005475 ORTHO05D006575 1.8e-16 89.4 105 51.4
Gohir.A02G042200 Gossypium hirsutum HOM05D005475 ORTHO05D006575 2.3e-16 89.0 105 50.5
Gohir.D02G047800 Gossypium hirsutum HOM05D005475 ORTHO05D006575 2.3e-16 89.0 105 50.5
THA.LOC104816000 Tarenaya hassleriana HOM05D005475 ORTHO05D006575 4.0e-16 88.2 105 48.6
Medtr1g045370 Medicago truncatula HOM05D005475 ORTHO05D006575 5.2e-16 87.8 106 51.9
FAN17G2060 Fragaria x ananassa HOM05D005475 ORTHO05D006575 8.9e-16 87.0 104 48.1
Lalb_Chr19g0128471 Lupinus albus HOM05D005475 ORTHO05D006575 1.2e-15 86.7 108 53.7
COL.COLO4_15946 Corchorus olitorius HOM05D005475 ORTHO05D006575 2.0e-15 85.9 106 49.1
CiPaw.02G108100 Carya illinoinensis HOM05D005475 ORTHO05D006575 2.6e-15 85.5 98 55.1
Dinv27096 Davidia involucrata HOM05D005475 ORTHO05D006575 5.8e-15 84.3 97 55.7
Cfa014769 Carpinus fangiana HOM05D005475 ORTHO05D006575 7.5e-15 84.0 105 51.4
Thecc.04G261900 Theobroma cacao HOM05D005475 ORTHO05D006575 7.5e-15 84.0 106 50.9
Duzib212G0290 Durio zibethinus HOM05D005475 ORTHO05D006575 9.8e-15 83.6 106 50.9
Glyma.20G086200 Glycine max HOM05D005475 ORTHO05D006575 9.8e-15 83.6 73 60.3
QL06p020702 Quercus lobata HOM05D005475 ORTHO05D006575 1.3e-14 83.2 91 54.9
CANSAT78G0624 Cannabis sativa HOM05D005475 ORTHO05D006575 3.7e-14 81.6 94 56.4
RcHm_v2.0_Chr4g0394791 Rosa chinensis HOM05D005475 ORTHO05D006575 3.7e-14 81.6 62 69.4
ClCG05G004080 Citrullus lanatus HOM05D005475 ORTHO05D006575 6.4e-14 80.9 91 49.5
Atru.chr4.1933 Acer truncatum HOM05D005475 ORTHO05D006575 1.1e-13 80.1 86 52.3
Sed0016324 Sechium edule HOM05D005475 ORTHO05D006575 1.1e-13 80.1 91 49.5
GSVIVG01027899001 Vitis vinifera HOM05D005475 ORTHO05D006575 1.1e-13 80.1 78 55.1
Potri.010G067200 Populus trichocarpa HOM05D005475 ORTHO05D006575 1.4e-13 79.7 106 48.1
Aa31LG1G20410 Aethionema arabicum HOM05D005475 ORTHO05D006575 1.8e-13 79.3 91 48.4
CAN.G220.90 Capsicum annuum HOM05D005475 ORTHO05D006575 1.8e-13 79.3 106 47.2
CARHR127400 Cardamine hirsuta HOM05D005475 ORTHO05D006575 1.8e-13 79.3 91 47.3
Solyc09g090540.3 Solanum lycopersicum HOM05D005475 ORTHO05D006575 2.4e-13 79.0 105 50.5
AL4G29060 Arabidopsis lyrata HOM05D005475 ORTHO05D006575 3.2e-13 78.6 104 45.2
Lalb_Chr06g0169471 Lupinus albus HOM05D005475 ORTHO05D006575 3.2e-13 78.6 86 54.7
Ciclev10006301m.g Citrus clementina HOM05D005475 ORTHO05D006575 7.0e-13 77.4 103 46.6
Peaxi162Scf00033g02837 Petunia axillaris HOM05D005475 ORTHO05D006575 7.0e-13 77.4 70 60.0
Sed0012950 Sechium edule HOM05D005475 ORTHO05D006575 7.0e-13 77.4 91 47.3
FAN12G1687 Fragaria x ananassa HOM05D005475 ORTHO05D006575 1.2e-12 76.6 100 45.0
TPR.G27310 Trifolium pratense HOM05D005475 ORTHO05D006575 1.2e-12 76.6 74 58.1
AT2G33390 Arabidopsis thaliana HOM05D005475 ORTHO05D006575 1.6e-12 76.3 104 44.2
Carub.0004s1502 Capsella rubella HOM05D005475 ORTHO05D006575 1.6e-12 76.3 104 42.3
CSS0013344 Camellia sinensis var. sinensis HOM05D005475 ORTHO05D006575 2.0e-12 75.9 92 47.8
Hma1.2p1_0112F.1_g054570 Hydrangea macrophylla HOM05D005475 ORTHO05D006575 3.5e-12 75.1 82 51.2
Lj6g0010293 Lotus japonicus HOM05D005475 ORTHO05D006575 4.6e-12 74.7 109 50.5
Sp4g15710 Schrenkiella parvula HOM05D005475 ORTHO05D006575 4.6e-12 74.7 93 46.2
Aa31LG5G3900 Aethionema arabicum HOM05D005475 ORTHO05D006575 6.0e-12 74.3 92 46.7
Thhalv10017471m.g Eutrema salsugineum HOM05D005475 ORTHO05D006575 7.8e-12 73.9 104 44.2
Nn3g19747 Nelumbo nucifera HOM05D005475 ORTHO05D006575 7.8e-12 73.9 94 47.9
TAR362G0816 Trochodendron aralioides HOM05D005475 ORTHO05D006575 7.8e-12 73.9 97 46.4
vmacro15470 Vaccinium macrocarpon HOM05D005475 ORTHO05D006575 1.3e-11 73.2 88 47.7
Gohir.D10G159400 Gossypium hirsutum HOM05D005475 ORTHO05D006575 2.3e-11 72.4 106 45.3
Gorai.011G179000 Gossypium raimondii HOM05D005475 ORTHO05D006575 2.3e-11 72.4 106 45.3
Rhsim02G0042800 Rhododendron simsii HOM05D005475 ORTHO05D006575 2.3e-11 72.4 104 44.2
Nitab4.5_0001051g0090 Nicotiana tabacum HOM05D005475 ORTHO05D006575 3.0e-11 72.0 78 53.8
Nitab4.5_0002709g0070 Nicotiana tabacum HOM05D005475 ORTHO05D006575 3.0e-11 72.0 96 46.9
Actinidia11364 Actinidia chinensis HOM05D005475 ORTHO05D006575 5.0e-11 71.2 104 42.3
Gohir.A10G108400 Gossypium hirsutum HOM05D005475 ORTHO05D006575 8.6e-11 70.5 106 44.3
Sabra08G0130500 Salix brachista HOM05D005475 ORTHO05D006575 8.6e-11 70.5 100 42.0
ECA248G3571 Erigeron canadensis HOM05D000730 ORTHO05D000578 1.5e-10 69.7 76 52.6
Hma1.2p1_0385F.1_g141450 Hydrangea macrophylla HOM05D005475 ORTHO05D006575 1.5e-10 69.7 91 48.4
Potri.008G170700 Populus trichocarpa HOM05D005475 ORTHO05D006575 1.5e-10 69.7 105 41.9
Sopen09g033470 Solanum pennellii HOM05D005475 ORTHO05D006575 1.9e-10 69.3 105 47.6
CsaV3_3G011800 Cucumis sativus L. HOM05D005475 ORTHO05D006575 2.5e-10 68.9 83 45.8
MBI07_g18714_MAGBIO Magnolia biondii HOM05D005475 ORTHO05D006575 2.5e-10 68.9 82 48.8
BcaB02g10558 Brassica carinata HOM05D005475 ORTHO05D006575 3.3e-10 68.6 105 40.0
C04p15700 Brassica napus HOM05D005475 ORTHO05D006575 3.3e-10 68.6 106 43.4
BolC4t23138H Brassica oleracea HOM05D005475 ORTHO05D006575 3.3e-10 68.6 106 43.4
Lsat_1_v5_gn_1_75221 Lactuca sativa HOM05D005475 ORTHO05D006575 3.3e-10 68.6 97 43.3
Hund03078 Selenicereus undatus HOM05D005475 ORTHO05D006575 4.3e-10 68.2 67 53.7
MELO3C006388.2 Cucumis melo HOM05D000730 ORTHO05D000578 5.6e-10 67.8 116 37.9
Duzib151G0481 Durio zibethinus HOM05D005475 ORTHO05D006575 5.6e-10 67.8 85 47.1
Lalb_Chr03g0037011 Lupinus albus HOM05D005475 ORTHO05D006575 5.6e-10 67.8 129 40.3
MBI10_g38466_MAGBIO Magnolia biondii HOM05D005475 ORTHO05D006575 5.6e-10 67.8 95 44.2
PGR031G0084 Punica granatum HOM05D005475 ORTHO05D006575 5.6e-10 67.8 89 44.9
PGSC0003DMG400017155 Solanum tuberosum HOM05D005475 ORTHO05D006575 5.6e-10 67.8 105 46.7
Actinidia20831 Actinidia chinensis HOM05D005475 ORTHO05D006575 7.3e-10 67.4 84 48.8
BcaC02g11426 Brassica carinata HOM05D005475 ORTHO05D006575 1.2e-09 66.6 105 41.9
Eucgr.H02964 Eucalyptus grandis HOM05D005475 ORTHO05D006575 1.2e-09 66.6 98 43.9
PSO674G0109 Papaver somniferum HOM05D005475 ORTHO05D006575 1.2e-09 66.6 63 58.7
PSO832G2786 Papaver somniferum HOM05D005475 ORTHO05D006575 1.2e-09 66.6 63 58.7
Cc03_g06010 Coffea canephora HOM05D005475 ORTHO05D006575 1.6e-09 66.2 72 50.0
FAN22G1457 Fragaria x ananassa HOM05D005475 ORTHO05D006575 1.6e-09 66.2 83 44.6
Aqoxy2G03723 Aquilegia oxysepala HOM05D005475 ORTHO05D006575 2.8e-09 65.5 54 57.4
FvH4_4g04340 Fragaria vesca HOM05D005475 ORTHO05D006575 2.8e-09 65.5 85 44.7
A05p12130 Brassica napus HOM05D005475 ORTHO05D006575 6.2e-09 64.3 106 41.5
FAN22G0728 Fragaria x ananassa HOM05D005475 ORTHO05D006575 6.2e-09 64.3 83 44.6
Actinidia39922 Actinidia chinensis HOM05D005475 ORTHO05D006575 1.1e-08 63.5 104 40.4
BraA05t20157Z Brassica rapa HOM05D005475 ORTHO05D006575 1.1e-08 63.5 107 41.1
vmacro08540 Vaccinium macrocarpon HOM05D005475 ORTHO05D006575 1.4e-08 63.2 100 38.0
Manes.03G160400 Manihot esculenta HOM05D005475 ORTHO05D006575 1.8e-08 62.8 64 53.1
BcaC07g37337 Brassica carinata HOM05D005475 ORTHO05D006575 8.9e-08 60.5 57 54.4
C08p07780 Brassica napus HOM05D005475 ORTHO05D006575 8.9e-08 60.5 57 54.4
BolC8t47626H Brassica oleracea HOM05D005475 ORTHO05D006575 8.9e-08 60.5 57 54.4
Sed0016405 Sechium edule HOM05D005475 ORTHO05D006575 1.2e-07 60.1 69 49.3
BcaB06g28682 Brassica carinata HOM05D005475 ORTHO05D006575 1.5e-07 59.7 54 55.6
A04p25690 Brassica napus HOM05D005475 ORTHO05D006575 1.5e-07 59.7 54 55.6
BraA04t18073Z Brassica rapa HOM05D005475 ORTHO05D006575 1.5e-07 59.7 54 55.6
Os03g0138400 Oryza sativa ssp. japonica HOM05D005475 ORTHO05D006575 1.5e-07 59.7 64 51.6
RcHm_v2.0_Chr4g0394821 Rosa chinensis HOM05D005475 ORTHO05D006575 1.5e-07 59.7 41 70.7
SalBow3G2868 Salvia bowleyana HOM05D005475 ORTHO05D006575 2.0e-07 59.3 62 50.0
A03p18710 Brassica napus HOM05D005475 ORTHO05D006575 2.6e-07 58.9 54 55.6
BraA03t11131Z Brassica rapa HOM05D005475 ORTHO05D006575 2.6e-07 58.9 54 55.6
CDE08G0603 Ceratophyllum demersum HOM05D005475 ORTHO05D006575 4.4e-07 58.2 97 39.2
BcaC02g07831 Brassica carinata HOM05D005475 ORTHO05D006575 5.8e-07 57.8 54 51.9
C04p62850 Brassica napus HOM05D005475 ORTHO05D006575 5.8e-07 57.8 54 51.9
BolC4t27768H Brassica oleracea HOM05D005475 ORTHO05D006575 5.8e-07 57.8 54 51.9
HanXRQChr01g0022901 Helianthus annuus HOM05D005475 ORTHO05D006575 5.8e-07 57.8 41 70.7
Lalb_Chr02g0150621 Lupinus albus HOM05D005475 ORTHO05D006575 7.5e-07 57.4 41 68.3
CSS0022443 Camellia sinensis var. sinensis HOM05D005475 ORTHO05D006575 9.8e-07 57.0 81 43.2
Migut.N00292 Erythranthe guttata HOM05D005475 ORTHO05D006575 1.3e-06 56.6 64 50.0
C03p21860 Brassica napus HOM05D005475 ORTHO05D006575 1.7e-06 56.2 54 53.7
BolC3t14568H Brassica oleracea HOM05D005475 ORTHO05D006575 1.7e-06 56.2 54 53.7
BcaC01g05844 Brassica carinata HOM05D005475 ORTHO05D006575 6.4e-06 54.3 53 50.9
MELO3C015574.2 Cucumis melo HOM05D007392 ORTHO05D009181 6.4e-06 54.3 84 39.3
Potri.003G221800 Populus trichocarpa HOM05D007392 ORTHO05D009181 6.4e-06 54.3 103 35.0


User provided reference genes

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