Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G28836 Trifolium pratense HOM05D000261 ORTHO05D411066 1.6e-39 165.6 85 100.0
VMungo1127G1206 Vigna mungo HOM05D000261 ORTHO05D000566 6.1e-10 67.4 64 51.6
TPR.G32374 Trifolium pratense HOM05D000261 ORTHO05D000566 7.9e-10 67.0 68 51.5
TPR.G10458 Trifolium pratense HOM05D001582 ORTHO05D001598 1.0e-09 66.6 57 59.6
Phvul.005G129000 Phaseolus vulgaris HOM05D000261 ORTHO05D000566 1.4e-09 66.2 71 53.5
Phvul.011G088300 Phaseolus vulgaris HOM05D000261 ORTHO05D000566 1.4e-09 66.2 66 50.0
Medtr2g084550 Medicago truncatula HOM05D000261 ORTHO05D000566 3.9e-09 64.7 68 50.0
Glyma.12G179800 Glycine max HOM05D000261 ORTHO05D000566 6.7e-09 63.9 66 53.0
Ca_01694_v3 Cicer arietinum L. HOM05D000261 ORTHO05D000566 1.5e-08 62.8 68 48.5
Glyma.11G190800 Glycine max HOM05D000261 ORTHO05D000566 2.5e-08 62.0 64 48.4
Hma1.2p1_0051F.1_g029720 Hydrangea macrophylla HOM05D000261 ORTHO05D000566 2.5e-08 62.0 63 47.6
TPR.G36345 Trifolium pratense HOM05D000261 ORTHO05D000566 2.5e-08 62.0 79 51.9
Glyma.12G083600 Glycine max HOM05D000261 ORTHO05D000566 4.3e-08 61.2 64 48.4
Lalb_Chr24g0395041 Lupinus albus HOM05D000261 ORTHO05D000566 4.3e-08 61.2 71 47.9
CANSAT64G1662 Cannabis sativa HOM05D000261 ORTHO05D000566 7.4e-08 60.5 69 55.1
MD03G1130700 Malus domestica HOM05D000261 ORTHO05D000566 9.7e-08 60.1 66 53.0
VMungo1080G0590 Vigna mungo HOM05D000261 ORTHO05D000566 2.2e-07 58.9 66 50.0
ClCG02G021750 Citrullus lanatus HOM05D000261 ORTHO05D000566 6.3e-07 57.4 66 45.5
MELO3C021471.2 Cucumis melo HOM05D000261 ORTHO05D000566 6.3e-07 57.4 53 49.1
MD11G1152500 Malus domestica HOM05D000261 ORTHO05D000566 6.3e-07 57.4 66 54.5
DCAR_018753 Daucus carota HOM05D000261 ORTHO05D000566 8.2e-07 57.0 66 45.5
Lj3g0004350 Lotus japonicus HOM05D000261 ORTHO05D000566 8.2e-07 57.0 65 49.2
Dinv12560 Davidia involucrata HOM05D000261 ORTHO05D000566 1.1e-06 56.6 66 47.0
Glyma.13G321000 Glycine max HOM05D000261 ORTHO05D000566 1.4e-06 56.2 66 45.5
Lalb_Chr03g0027841 Lupinus albus HOM05D000261 ORTHO05D000566 1.8e-06 55.8 62 46.8
TAR623G0196 Trochodendron aralioides HOM05D000261 ORTHO05D000566 1.8e-06 55.8 67 46.3
Dinv29397 Davidia involucrata HOM05D000261 ORTHO05D000566 3.1e-06 55.1 66 47.0
Medtr4g056420 Medicago truncatula HOM05D000261 ORTHO05D000566 5.3e-06 54.3 58 48.3
arahy.Tifrunner.gnm1.ann1.JB1QA6 Arachis hypogaea HOM05D000261 ORTHO05D000566 9.1e-06 53.5 67 41.8
arahy.Tifrunner.gnm1.ann1.YFIP32 Arachis hypogaea HOM05D000261 ORTHO05D000566 9.1e-06 53.5 67 41.8
CsaV3_6G014540 Cucumis sativus L. HOM05D000261 ORTHO05D000566 9.1e-06 53.5 66 40.9
Lj3g0003984 Lotus japonicus HOM05D000261 ORTHO05D000566 9.1e-06 53.5 52 50.0
Lj3g0019133 Lotus japonicus HOM05D000261 ORTHO05D000566 9.1e-06 53.5 71 43.7
Sed0017587 Sechium edule HOM05D000261 ORTHO05D000566 9.1e-06 53.5 66 45.5
GSVIVG01031432001 Vitis vinifera HOM05D000261 ORTHO05D000566 9.1e-06 53.5 47 55.3


User provided reference genes

Program Settings