Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G2867 Trifolium pratense HOM05D000650 ORTHO05D007302 9.3e-33 142.9 70 100.0
TPR.G18351 Trifolium pratense HOM05D000650 ORTHO05D007302 4.3e-30 134.0 68 97.1
Psat7g102080 Pisum sativum HOM05D000650 ORTHO05D007302 1.0e-23 112.8 69 76.8
TPR.G20268 Trifolium pratense HOM05D000650 ORTHO05D007302 3.0e-23 111.3 69 78.3
Medtr4g093510 Medicago truncatula HOM05D000650 ORTHO05D007302 1.5e-22 109.0 69 76.8
TPR.G16877 Trifolium pratense HOM05D000650 ORTHO05D007302 4.4e-22 107.5 70 78.6
Medtr4g093260 Medicago truncatula HOM05D000650 ORTHO05D007302 5.7e-22 107.1 69 73.9
Lj4g0020146 Lotus japonicus HOM05D000650 ORTHO05D007302 3.7e-21 104.4 69 71.0
Psat7g102120 Pisum sativum HOM05D000650 ORTHO05D007302 6.9e-20 100.1 67 73.1
Medtr4g093280 Medicago truncatula HOM05D000650 ORTHO05D007302 5.9e-19 97.1 69 69.6
Glyma.08G066700 Glycine max HOM05D000650 ORTHO05D007302 1.0e-18 96.3 64 70.3
Lj4g0012325 Lotus japonicus HOM05D000650 ORTHO05D007302 1.0e-18 96.3 69 66.7
Lj4g0020470 Lotus japonicus HOM05D000650 ORTHO05D007302 1.0e-18 96.3 69 66.7
Lj4g0018033 Lotus japonicus HOM05D000650 ORTHO05D007302 1.1e-17 92.8 64 68.8
VMungo0251G0586 Vigna mungo HOM05D000650 ORTHO05D007302 1.1e-17 92.8 64 71.9
Lalb_Chr16g0383011 Lupinus albus HOM05D000650 ORTHO05D007302 1.4e-17 92.4 64 65.6
Medtr4g093270 Medicago truncatula HOM05D000650 ORTHO05D007302 2.8e-13 78.2 50 72.0
TPR.G35142 Trifolium pratense HOM05D000650 ORTHO05D007302 1.1e-12 76.3 41 85.4
Gorai.005G226700 Gossypium raimondii HOM05D000650 ORTHO05D007302 3.1e-12 74.7 69 49.3
DCAR_001849 Daucus carota HOM05D000650 ORTHO05D007302 4.1e-12 74.3 64 53.1
Dinv08988 Davidia involucrata HOM05D000650 ORTHO05D000735 5.3e-12 73.9 64 56.2
TWI59G0327 Tripterygium wilfordii HOM05D000650 ORTHO05D007302 7.0e-12 73.6 64 53.1
Duzib132G0086 Durio zibethinus HOM05D000650 ORTHO05D007302 9.1e-12 73.2 69 47.8
Gohir.A03G178000 Gossypium hirsutum HOM05D000650 ORTHO05D007302 1.6e-11 72.4 69 47.8
Gohir.D02G201700 Gossypium hirsutum HOM05D000650 ORTHO05D007302 1.6e-11 72.4 69 47.8
QL11p025817 Quercus lobata HOM05D000650 ORTHO05D007302 1.6e-11 72.4 69 47.8
TWI14G0488 Tripterygium wilfordii HOM05D000650 ORTHO05D007302 2.6e-11 71.6 69 47.8
Lj5A228T42 Lonicera japonica HOM05D000650 ORTHO05D007302 5.9e-11 70.5 64 48.4
Manes.10G096300 Manihot esculenta HOM05D000650 ORTHO05D007302 1.3e-10 69.3 63 50.8
Oeu063550.2 Olea europaea HOM05D000650 ORTHO05D007302 1.3e-10 69.3 64 53.1
TWI14G0262 Tripterygium wilfordii HOM05D000650 ORTHO05D000735 1.3e-10 69.3 69 46.4
Cpa.g.sc20.26 Carica papaya HOM05D000650 ORTHO05D000735 1.7e-10 68.9 69 50.7
Haze_10696 Corylus avellana HOM05D000650 ORTHO05D007302 2.2e-10 68.6 56 55.4
Haze_10689 Corylus avellana HOM05D000650 ORTHO05D007302 3.8e-10 67.8 63 47.6
Cfa005605 Carpinus fangiana HOM05D004981 ORTHO05D005635 8.5e-10 66.6 51 52.9
vmacro01872 Vaccinium macrocarpon HOM05D000650 ORTHO05D007302 8.5e-10 66.6 69 44.9
Nitab4.5_0002750g0080 Nicotiana tabacum HOM05D000650 ORTHO05D007302 1.1e-09 66.2 63 47.6
Potri.017G139000 Populus trichocarpa HOM05D000650 ORTHO05D007302 1.1e-09 66.2 62 48.4
Psat7g102160 Pisum sativum HOM05D000650 ORTHO05D007302 1.5e-09 65.9 42 73.8
QL11p025811 Quercus lobata HOM05D000650 ORTHO05D007302 1.5e-09 65.9 69 46.4
Prupe.8G072600 Prunus persica HOM05D000650 ORTHO05D007302 1.9e-09 65.5 65 46.2
SGA_v2.0_scaffold83G26387 Striga asiatica HOM05D000650 ORTHO05D000735 1.9e-09 65.5 69 49.3
CSS0029976 Camellia sinensis var. sinensis HOM05D000650 ORTHO05D007302 2.5e-09 65.1 70 47.1
Duzib248G1171 Durio zibethinus HOM05D000650 ORTHO05D007302 3.2e-09 64.7 69 43.5
RcHm_v2.0_Chr6g0270081 Rosa chinensis HOM05D000650 ORTHO05D007302 3.2e-09 64.7 63 44.4
GSVIVG01000327001 Vitis vinifera HOM05D000650 ORTHO05D007302 3.2e-09 64.7 70 44.3
COL.COLO4_32414 Corchorus olitorius HOM05D000650 ORTHO05D007302 4.2e-09 64.3 69 42.0
Manes.07G043000 Manihot esculenta HOM05D000650 ORTHO05D007302 4.2e-09 64.3 67 49.3
Manes.07G043100 Manihot esculenta HOM05D000650 ORTHO05D015160 4.2e-09 64.3 67 49.3
Prupe.8G072900 Prunus persica HOM05D000650 ORTHO05D007302 4.2e-09 64.3 69 40.6
Atru.chr6.1306 Acer truncatum HOM05D000650 ORTHO05D007302 5.5e-09 63.9 71 46.5
Actinidia02402 Actinidia chinensis HOM05D000650 ORTHO05D007302 5.5e-09 63.9 69 46.4
Prupe.8G228800 Prunus persica HOM05D000650 ORTHO05D000735 5.5e-09 63.9 63 41.3
Thecc.02G127100 Theobroma cacao HOM05D000650 ORTHO05D007302 5.5e-09 63.9 64 46.9
GSVIVG01012547001 Vitis vinifera HOM05D000650 ORTHO05D000735 5.5e-09 63.9 69 43.5
Haze_10698 Corylus avellana HOM05D000650 ORTHO05D000735 7.2e-09 63.5 63 46.0
vmacro01871 Vaccinium macrocarpon HOM05D000650 ORTHO05D007302 7.2e-09 63.5 69 42.0
GSVIVG01000325001 Vitis vinifera HOM05D000650 ORTHO05D000735 7.2e-09 63.5 69 43.5
GSVIVG01000320001 Vitis vinifera HOM05D000650 ORTHO05D007302 9.4e-09 63.2 69 42.0
GSVIVG01000330001 Vitis vinifera HOM05D000650 ORTHO05D007302 9.4e-09 63.2 64 43.8
CSS0042971 Camellia sinensis var. sinensis HOM05D000650 ORTHO05D000735 1.2e-08 62.8 70 47.1
Rhsim11G0141200 Rhododendron simsii HOM05D000650 ORTHO05D007302 1.2e-08 62.8 64 43.8
GSVIVG01012543001 Vitis vinifera HOM05D000650 ORTHO05D007302 1.2e-08 62.8 69 43.5
CAN.G531.4 Capsicum annuum HOM05D000650 ORTHO05D007302 1.6e-08 62.4 63 47.6
Dinv08989 Davidia involucrata HOM05D000650 ORTHO05D000735 1.6e-08 62.4 50 58.0
RcHm_v2.0_Chr6g0270171 Rosa chinensis HOM05D000650 ORTHO05D007302 2.1e-08 62.0 63 42.9
RcHm_v2.0_Chr6g0270151 Rosa chinensis HOM05D000650 ORTHO05D007302 3.6e-08 61.2 63 41.3
GSVIVG01000324001 Vitis vinifera HOM05D000650 ORTHO05D000735 4.7e-08 60.8 63 39.7
FvH4_2g11450 Fragaria vesca HOM05D000650 ORTHO05D007302 6.1e-08 60.5 61 47.5
FAN24G2673 Fragaria x ananassa HOM05D000650 ORTHO05D000735 6.1e-08 60.5 61 47.5
FAN24G3507 Fragaria x ananassa HOM05D000650 ORTHO05D007302 6.1e-08 60.5 61 47.5
Sabra16G0176200 Salix brachista HOM05D000650 ORTHO05D000735 6.1e-08 60.5 62 46.8
TAR625G0266 Trochodendron aralioides HOM05D000650 ORTHO05D003816 6.1e-08 60.5 69 40.6
FvH4_2g11420 Fragaria vesca HOM05D000650 ORTHO05D007302 8.0e-08 60.1 61 45.9
FAN15G2135 Fragaria x ananassa HOM05D000650 ORTHO05D007302 8.0e-08 60.1 61 45.9
FAN20G2101 Fragaria x ananassa HOM05D000650 ORTHO05D007302 8.0e-08 60.1 61 45.9
Sabra17G0113500 Salix brachista HOM05D000650 ORTHO05D007302 1.0e-07 59.7 62 45.2
TAR625G0371 Trochodendron aralioides HOM05D000650 ORTHO05D000735 1.0e-07 59.7 69 40.6
GSVIVG01038510001 Vitis vinifera HOM05D000650 ORTHO05D007302 1.0e-07 59.7 63 41.3
FAN27G0840 Fragaria x ananassa HOM05D000650 ORTHO05D007302 1.4e-07 59.3 61 45.9
QL11p029412 Quercus lobata HOM05D000650 ORTHO05D007302 1.4e-07 59.3 61 50.8
Sabra09G0060100 Salix brachista HOM05D000650 ORTHO05D007302 1.4e-07 59.3 62 45.2
TAR625G0834 Trochodendron aralioides HOM05D000650 ORTHO05D000735 1.4e-07 59.3 69 40.6
Nitab4.5_0012000g0010 Nicotiana tabacum HOM05D000650 ORTHO05D007302 1.8e-07 58.9 64 43.8
TAR381G0504 Trochodendron aralioides HOM05D000650 ORTHO05D000735 1.8e-07 58.9 69 39.1
Atru.chr6.1308 Acer truncatum HOM05D000650 ORTHO05D007302 2.3e-07 58.5 71 40.8
CANSAT54G2685 Cannabis sativa HOM05D000650 ORTHO05D007302 2.3e-07 58.5 69 44.9
Migut.B00537 Erythranthe guttata HOM05D000650 ORTHO05D000735 2.3e-07 58.5 69 43.5
DCAR_029285 Daucus carota HOM05D000650 ORTHO05D007302 4.0e-07 57.8 50 52.0
Nitab4.5_0001259g0050 Nicotiana tabacum HOM05D000650 ORTHO05D007302 4.0e-07 57.8 64 45.3
Prupe.8G229300 Prunus persica HOM05D000650 ORTHO05D000735 4.0e-07 57.8 51 47.1
Haze_07342 Corylus avellana HOM05D000650 ORTHO05D000735 6.7e-07 57.0 64 42.2
Cfa018961 Carpinus fangiana HOM05D000650 ORTHO05D000735 8.8e-07 56.6 64 42.2
Sopen10g018090 Solanum pennellii HOM05D000650 ORTHO05D007302 1.2e-06 56.2 64 42.2
vmacro16555 Vaccinium macrocarpon HOM05D000650 ORTHO05D000735 1.2e-06 56.2 64 45.3
Atru.chr6.1309 Acer truncatum HOM05D000650 ORTHO05D007302 2.0e-06 55.5 59 42.4
Actinidia04905 Actinidia chinensis HOM05D000650 ORTHO05D000735 2.0e-06 55.5 64 45.3
CANSAT54G0504 Cannabis sativa HOM05D000650 ORTHO05D007302 2.0e-06 55.5 68 47.1
THA.LOC104813878 Tarenaya hassleriana HOM05D000650 ORTHO05D000735 2.0e-06 55.5 64 45.3
vmacro17556 Vaccinium macrocarpon HOM05D000650 ORTHO05D000735 2.0e-06 55.5 64 43.8
GSVIVG01009203001 Vitis vinifera HOM05D000650 ORTHO05D000735 2.0e-06 55.5 67 40.3
Aqoxy6G00819 Aquilegia oxysepala HOM05D000650 ORTHO05D000735 2.6e-06 55.1 69 37.7
CANSAT54G0545 Cannabis sativa HOM05D000650 ORTHO05D007302 2.6e-06 55.1 68 47.1
CANSAT25G0331 Cannabis sativa HOM05D000650 ORTHO05D010020 3.3e-06 54.7 69 36.2
Solyc10g047670.2 Solanum lycopersicum HOM05D000650 ORTHO05D007302 3.3e-06 54.7 64 40.6
PGSC0003DMG400029015 Solanum tuberosum HOM05D000650 ORTHO05D007302 3.3e-06 54.7 64 40.6
GSVIVG01020012001 Vitis vinifera HOM05D000650 ORTHO05D000735 3.3e-06 54.7 64 43.8
Cc04_g16940 Coffea canephora HOM05D000650 ORTHO05D000735 4.4e-06 54.3 52 46.2
CARHR067800 Cardamine hirsuta HOM05D000650 ORTHO05D000735 5.7e-06 53.9 52 50.0
Dinv42596 Davidia involucrata HOM05D000650 ORTHO05D010020 5.7e-06 53.9 69 34.8
PGSC0003DMG400010683 Solanum tuberosum HOM05D000650 ORTHO05D051233 5.7e-06 53.9 63 36.5
CiPaw.11G042600 Carya illinoinensis HOM05D000650 ORTHO05D000735 7.5e-06 53.5 64 40.6
CiPaw.12G014200 Carya illinoinensis HOM05D000650 ORTHO05D000735 7.5e-06 53.5 52 44.2
THA.LOC104819441 Tarenaya hassleriana HOM05D000650 ORTHO05D000735 7.5e-06 53.5 64 43.8
vmacro01873 Vaccinium macrocarpon HOM05D000650 ORTHO05D007302 7.5e-06 53.5 69 42.0
HPP92_016857 Vanilla planifolia HOM05D000650 ORTHO05D000735 7.5e-06 53.5 69 43.5
BcaB05g24858 Brassica carinata HOM05D000650 ORTHO05D000735 9.7e-06 53.1 64 42.2
CANSAT78G1891 Cannabis sativa HOM05D000650 ORTHO05D000735 9.7e-06 53.1 64 42.2
DCAR_016538 Daucus carota HOM05D000650 ORTHO05D000735 9.7e-06 53.1 64 43.8
Dinv16632 Davidia involucrata HOM05D000650 ORTHO05D000735 9.7e-06 53.1 64 45.3
Nn1g05634 Nelumbo nucifera HOM05D000650 ORTHO05D000735 9.7e-06 53.1 69 39.1
Rhsim11G0141100 Rhododendron simsii HOM05D000650 ORTHO05D007302 9.7e-06 53.1 69 40.6


User provided reference genes

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