Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G28649 Trifolium pratense HOM05D000138 ORTHO05D000078 5.7e-86 320.9 159 100.0
Psat4g182360 Pisum sativum HOM05D000138 ORTHO05D000078 1.6e-64 249.6 170 79.4
Medtr8g020510 Medicago truncatula HOM05D000138 ORTHO05D000078 6.3e-61 237.7 173 79.8
Ca_23373_v3 Cicer arietinum L. HOM05D000138 ORTHO05D000078 2.7e-59 232.3 172 75.6
Glyma.07G038200 Glycine max HOM05D000138 ORTHO05D000078 1.2e-56 223.4 176 71.6
Glyma.16G007400 Glycine max HOM05D000138 ORTHO05D000078 1.7e-53 213.0 173 69.9
Lj3g0003045 Lotus japonicus HOM05D000138 ORTHO05D000078 2.9e-53 212.2 176 69.9
Lalb_Chr04g0263491 Lupinus albus HOM05D000138 ORTHO05D000078 1.8e-52 209.5 174 68.4
arahy.Tifrunner.gnm1.ann1.GP73H9 Arachis hypogaea HOM05D000138 ORTHO05D000078 4.6e-51 204.9 169 69.2
Phvul.010G130200 Phaseolus vulgaris HOM05D000138 ORTHO05D000078 5.0e-50 201.4 175 67.4
arahy.Tifrunner.gnm1.ann1.V8I50K Arachis hypogaea HOM05D000138 ORTHO05D000078 1.1e-49 200.3 169 68.0
Lalb_Chr01g0013601 Lupinus albus HOM05D000138 ORTHO05D000078 2.6e-46 189.1 175 65.7
VMungo0331G1230 Vigna mungo HOM05D000138 ORTHO05D000078 7.0e-44 181.0 184 63.0
Lalb_Chr25g0281251 Lupinus albus HOM05D000138 ORTHO05D000078 1.4e-36 156.8 174 59.8
Gohir.A05G405700 Gossypium hirsutum HOM05D000138 ORTHO05D000078 3.0e-34 149.1 170 52.9
Thecc.06G119800 Theobroma cacao HOM05D000138 ORTHO05D000078 3.0e-34 149.1 170 54.1
Gohir.D04G010000 Gossypium hirsutum HOM05D000138 ORTHO05D000078 1.1e-33 147.1 170 53.5
Gorai.012G011800 Gossypium raimondii HOM05D000138 ORTHO05D000078 1.5e-33 146.7 170 53.5
QL05p007550 Quercus lobata HOM05D000138 ORTHO05D000078 8.1e-32 141.0 171 53.8
Ciclev10025181m.g Citrus clementina HOM05D000138 ORTHO05D000078 8.9e-31 137.5 170 51.8
Duzib235G1070 Durio zibethinus HOM05D000138 ORTHO05D000078 2.0e-30 136.3 170 51.2
DCAR_007644 Daucus carota HOM05D000138 ORTHO05D000078 1.3e-29 133.7 174 52.9
RcHm_v2.0_Chr2g0145271 Rosa chinensis HOM05D000138 ORTHO05D000078 1.7e-29 133.3 168 51.8
Prupe.3G042000 Prunus persica HOM05D000138 ORTHO05D000078 3.7e-29 132.1 173 52.0
GSVIVG01016764001 Vitis vinifera HOM05D000138 ORTHO05D000078 4.9e-29 131.7 176 51.7
Duzib192G1040 Durio zibethinus HOM05D000138 ORTHO05D000078 1.4e-28 130.2 171 50.3
MD09G1183700 Malus domestica HOM05D000138 ORTHO05D000078 2.4e-28 129.4 159 52.2
FAN05G5693 Fragaria x ananassa HOM05D000138 ORTHO05D000078 9.2e-28 127.5 164 53.7
Dinv20438 Davidia involucrata HOM05D000138 ORTHO05D000078 1.2e-27 127.1 166 49.4
FAN09G0912 Fragaria x ananassa HOM05D000138 ORTHO05D000078 1.6e-27 126.7 167 53.9
FvH4_6g34710 Fragaria vesca HOM05D000138 ORTHO05D000078 2.7e-27 125.9 167 53.3
FAN14G3244 Fragaria x ananassa HOM05D000138 ORTHO05D000078 2.7e-27 125.9 167 53.3
Eucgr.F04421 Eucalyptus grandis HOM05D000138 ORTHO05D000078 7.8e-27 124.4 180 48.3
FAN02G4198 Fragaria x ananassa HOM05D000138 ORTHO05D000078 1.7e-26 123.2 167 51.5
Manes.11G020300 Manihot esculenta HOM05D000138 ORTHO05D000078 5.1e-26 121.7 159 49.1
Haze_16032 Corylus avellana HOM05D000138 ORTHO05D000078 1.9e-25 119.8 146 52.7
Atru.chr1.3941 Acer truncatum HOM05D000138 ORTHO05D000078 3.3e-25 119.0 176 47.7
Cfa003534 Carpinus fangiana HOM05D000138 ORTHO05D000078 6.2e-24 114.8 148 50.7
COL.COLO4_30759 Corchorus olitorius HOM05D000138 ORTHO05D000078 6.2e-24 114.8 170 52.4
Manes.04G144500 Manihot esculenta HOM05D000138 ORTHO05D000078 6.8e-23 111.3 159 46.5
Nn6g35609 Nelumbo nucifera HOM05D000138 ORTHO05D000078 8.9e-23 110.9 186 43.5
Oeu000419.1 Olea europaea HOM05D000138 ORTHO05D000078 1.9e-20 103.2 173 45.7
TWI79G0775 Tripterygium wilfordii HOM05D000138 ORTHO05D000078 4.2e-20 102.1 171 40.9
CsaV3_3G031350 Cucumis sativus L. HOM05D000138 ORTHO05D000078 1.0e-18 97.4 174 43.7
Cpa.g.sc25.116 Carica papaya HOM05D000138 ORTHO05D000078 1.3e-18 97.1 176 43.2
Sopen03g041210 Solanum pennellii HOM05D000138 ORTHO05D000078 1.3e-18 97.1 168 41.7
Cc04_g01350 Coffea canephora HOM05D000138 ORTHO05D000078 1.7e-18 96.7 186 43.5
Peaxi162Scf00038g02140 Petunia axillaris HOM05D000138 ORTHO05D000078 3.9e-18 95.5 171 40.9
Actinidia26026 Actinidia chinensis HOM05D000138 ORTHO05D000078 5.1e-18 95.1 159 46.5
ClCG07G014050 Citrullus lanatus HOM05D000138 ORTHO05D000078 5.1e-18 95.1 177 41.2
SalBow6G6221 Salvia bowleyana HOM05D000138 ORTHO05D000078 5.1e-18 95.1 167 43.1
SalBow6G6730 Salvia bowleyana HOM05D000138 ORTHO05D000078 5.1e-18 95.1 167 43.1
Sed0023201 Sechium edule HOM05D000138 ORTHO05D000078 5.1e-18 95.1 174 41.4
Hma1.2p1_0291F.1_g115120 Hydrangea macrophylla HOM05D000138 ORTHO05D000078 6.6e-18 94.7 166 43.4
PGSC0003DMG401009171 Solanum tuberosum HOM05D000138 ORTHO05D000078 6.6e-18 94.7 172 40.7
CiPaw.01G218700 Carya illinoinensis HOM05D000138 ORTHO05D000078 1.5e-17 93.6 155 46.5
Nitab4.5_0009829g0010 Nicotiana tabacum HOM05D000138 ORTHO05D000078 1.9e-17 93.2 168 40.5
CAN.G668.48 Capsicum annuum HOM05D000138 ORTHO05D000078 7.3e-17 91.3 169 40.8
TAR626G1944 Trochodendron aralioides HOM05D000138 ORTHO05D000078 3.6e-16 89.0 168 43.5
CANSAT56G3905 Cannabis sativa HOM05D000138 ORTHO05D000078 4.8e-16 88.6 168 42.3
MELO3C025807.2 Cucumis melo HOM05D000138 ORTHO05D000078 4.8e-16 88.6 180 41.1
TAR626G1159 Trochodendron aralioides HOM05D000138 ORTHO05D000078 1.8e-15 86.7 168 42.9
Actinidia27737 Actinidia chinensis HOM05D000138 ORTHO05D000078 3.1e-15 85.9 157 44.6
MSTRG.22549 Avicennia marina HOM05D000138 ORTHO05D000078 3.1e-15 85.9 167 41.3
Nitab4.5_0003987g0010 Nicotiana tabacum HOM05D000138 ORTHO05D000078 1.5e-14 83.6 161 39.1
AUR62009883 Chenopodium quinoa HOM05D000138 ORTHO05D000078 3.8e-13 79.0 173 39.3
Rhsim08G0239100 Rhododendron simsii HOM05D000138 ORTHO05D000078 8.4e-13 77.8 164 42.7
Potri.003G064700 Populus trichocarpa HOM05D000138 ORTHO05D000078 2.4e-12 76.3 169 38.5
MBI13_g11331_MAGBIO Magnolia biondii HOM05D000138 ORTHO05D000078 7.1e-12 74.7 198 35.9
Potri.001G169500 Populus trichocarpa HOM05D000138 ORTHO05D000078 1.7e-10 70.1 75 60.0
CDE05G0432 Ceratophyllum demersum HOM05D000138 ORTHO05D000078 3.9e-10 68.9 189 33.9
PGR119G0293 Punica granatum HOM05D000138 ORTHO05D000078 3.9e-10 68.9 169 42.0
PSO210G4751 Papaver somniferum HOM05D000138 ORTHO05D000078 8.7e-10 67.8 180 37.8
TWI75G1516 Tripterygium wilfordii HOM05D000138 ORTHO05D000078 8.7e-10 67.8 90 51.1
PSO386G0113 Papaver somniferum HOM05D000138 ORTHO05D000078 7.3e-09 64.7 180 35.6
Ah.08g216790 Amaranthus hybridus HOM05D000138 ORTHO05D000078 1.3e-08 63.9 162 34.0
Sc10g0007900 Simmondsia chinensis HOM05D000138 ORTHO05D000078 1.8e-07 60.1 160 33.1
EL10Ac7g16408 Beta vulgaris HOM05D000138 ORTHO05D000078 2.4e-07 59.7 99 43.4
CDE05G2020 Ceratophyllum demersum HOM05D000138 ORTHO05D000078 4.0e-07 58.9 175 32.6
vmacro15034 Vaccinium macrocarpon HOM05D000138 ORTHO05D000078 1.5e-06 57.0 67 53.7


User provided reference genes

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