Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G28492 Trifolium pratense HOM05D007022 ORTHO05D008868 2.5e-93 345.5 181 100.0
Psat7g125000 Pisum sativum HOM05D007022 ORTHO05D008868 5.3e-72 274.6 192 78.6
Ca_18680_v3 Cicer arietinum L. HOM05D007022 ORTHO05D008868 1.4e-69 266.5 192 76.0
Medtr4g086255 Medicago truncatula HOM05D007022 ORTHO05D008868 4.2e-61 238.4 150 80.7
Lj4g0019449 Lotus japonicus HOM05D007022 ORTHO05D008868 1.6e-60 236.5 190 65.3
Lalb_Chr16g0384701 Lupinus albus HOM05D007022 ORTHO05D008868 6.1e-52 208.0 189 64.6
Phvul.003G292600 Phaseolus vulgaris HOM05D007022 ORTHO05D008868 6.1e-52 208.0 169 67.5
Glyma.07G212100 Glycine max HOM05D007022 ORTHO05D008868 4.0e-51 205.3 169 67.5
ClCG05G010000 Citrullus lanatus HOM05D007022 ORTHO05D008868 5.2e-51 204.9 184 64.1
VMungo0251G0366 Vigna mungo HOM05D007022 ORTHO05D008868 1.5e-50 203.4 182 58.8
Atru.chr5.2709 Acer truncatum HOM05D007022 ORTHO05D008868 2.0e-50 203.0 182 63.2
Sed0002892 Sechium edule HOM05D007022 ORTHO05D008868 3.4e-50 202.2 167 68.3
Glyma.02G132900 Glycine max HOM05D007022 ORTHO05D008868 4.4e-50 201.8 183 63.9
MD10G1094200 Malus domestica HOM05D007022 ORTHO05D008868 9.8e-50 200.7 170 65.3
TWI75G1380 Tripterygium wilfordii HOM05D007022 ORTHO05D008868 1.7e-49 199.9 188 60.6
PGR042G2146 Punica granatum HOM05D007022 ORTHO05D008868 4.8e-49 198.4 178 57.3
Ciclev10029362m.g Citrus clementina HOM05D007022 ORTHO05D008868 1.4e-48 196.8 168 58.9
CSS0015269 Camellia sinensis var. sinensis HOM05D007022 ORTHO05D008868 4.1e-48 195.3 172 63.4
CsaV3_3G018570 Cucumis sativus L. HOM05D007022 ORTHO05D008868 1.2e-47 193.7 180 62.2
arahy.Tifrunner.gnm1.ann1.059Z6S Arachis hypogaea HOM05D007022 ORTHO05D008868 2.7e-47 192.6 183 63.4
Cpa.g.sc62.15 Carica papaya HOM05D007022 ORTHO05D008868 2.7e-47 192.6 184 57.1
CANSAT25G3754 Cannabis sativa HOM05D007022 ORTHO05D008868 4.5e-47 191.8 186 59.7
Dinv23619 Davidia involucrata HOM05D007022 ORTHO05D008868 4.5e-47 191.8 172 54.7
Manes.07G082700 Manihot esculenta HOM05D007022 ORTHO05D008868 4.5e-47 191.8 140 64.3
Prupe.8G124000 Prunus persica HOM05D007022 ORTHO05D008868 4.5e-47 191.8 192 57.8
Potri.009G102400 Populus trichocarpa HOM05D007022 ORTHO05D008868 5.9e-47 191.4 178 59.6
MELO3C019509.2 Cucumis melo HOM05D007022 ORTHO05D008868 2.9e-46 189.1 176 61.9
QL11p035981 Quercus lobata HOM05D007022 ORTHO05D008868 2.9e-46 189.1 191 52.9
Gohir.D13G038800 Gossypium hirsutum HOM05D007022 ORTHO05D008868 3.8e-46 188.7 173 56.1
Gorai.013G043500 Gossypium raimondii HOM05D007022 ORTHO05D008868 3.8e-46 188.7 173 56.1
GSVIVG01031751001 Vitis vinifera HOM05D007022 ORTHO05D008868 5.0e-46 188.3 185 53.0
Hma1.2p1_0370F.1_g137830 Hydrangea macrophylla HOM05D007022 ORTHO05D008868 8.6e-46 187.6 181 54.1
Gohir.A13G040100 Gossypium hirsutum HOM05D007022 ORTHO05D008868 1.1e-45 187.2 173 55.5
Thecc.02G100400 Theobroma cacao HOM05D007022 ORTHO05D008868 2.5e-45 186.0 171 56.1
MBI06_g36648_MAGBIO Magnolia biondii HOM05D007022 ORTHO05D008868 4.2e-45 185.3 198 53.5
COL.COLO4_32660 Corchorus olitorius HOM05D007022 ORTHO05D003154 5.5e-45 184.9 171 54.4
Nitab4.5_0002543g0040 Nicotiana tabacum HOM05D007022 ORTHO05D008868 1.2e-44 183.7 187 52.9
Haze_10076 Corylus avellana HOM05D007022 ORTHO05D008868 6.1e-44 181.4 214 47.7
RcHm_v2.0_Chr6g0257061 Rosa chinensis HOM05D007022 ORTHO05D008868 6.1e-44 181.4 180 56.7
Cc02_g18740 Coffea canephora HOM05D007022 ORTHO05D008868 1.0e-43 180.6 185 51.4
FvH4_2g06130 Fragaria vesca HOM05D007022 ORTHO05D008868 1.4e-43 180.3 174 58.0
CiPaw.06G172800 Carya illinoinensis HOM05D007022 ORTHO05D008868 1.8e-43 179.9 173 54.9
Actinidia12953 Actinidia chinensis HOM05D007022 ORTHO05D008868 2.3e-43 179.5 178 53.9
CDE04G2473 Ceratophyllum demersum HOM05D007022 ORTHO05D008868 2.3e-43 179.5 115 68.7
Rhsim11G0166300 Rhododendron simsii HOM05D007022 ORTHO05D008868 3.0e-43 179.1 172 54.7
vmacro02203 Vaccinium macrocarpon HOM05D007022 ORTHO05D008868 3.0e-43 179.1 179 50.8
Lsat_1_v5_gn_9_110080 Lactuca sativa HOM05D007022 ORTHO05D008868 4.0e-43 178.7 130 73.1
Nn1g04883 Nelumbo nucifera HOM05D007022 ORTHO05D008868 5.2e-43 178.3 126 63.5
TAR381G0954 Trochodendron aralioides HOM05D007022 ORTHO05D008868 8.9e-43 177.6 191 49.2
HanXRQChr09g0251721 Helianthus annuus HOM05D007022 ORTHO05D008868 1.2e-42 177.2 117 75.2
Peaxi162Scf00016g01823 Petunia axillaris HOM05D007022 ORTHO05D008868 1.2e-42 177.2 122 73.8
Hund00236 Selenicereus undatus HOM05D007022 ORTHO05D008868 7.5e-42 174.5 117 73.5
SGA_v2.0_scaffold13G06591 Striga asiatica HOM05D007022 ORTHO05D008868 9.8e-42 174.1 174 54.0
Nitab4.5_0007480g0010 Nicotiana tabacum HOM05D007022 ORTHO05D008868 1.3e-41 173.7 134 61.2
Aqoxy6G01341 Aquilegia oxysepala HOM05D007022 ORTHO05D008868 1.7e-41 173.3 122 68.0
Nn5g30258 Nelumbo nucifera HOM05D007022 ORTHO05D008868 2.2e-41 172.9 130 59.2
arahy.Tifrunner.gnm1.ann1.WB2CJ6 Arachis hypogaea HOM05D007022 ORTHO05D008868 2.8e-41 172.6 169 57.4
SalBow6G3975 Salvia bowleyana HOM05D007022 ORTHO05D008868 3.7e-41 172.2 176 53.4
PSO675G2542 Papaver somniferum HOM05D007022 ORTHO05D008868 8.3e-41 171.0 125 72.0
ECA240G1411 Erigeron canadensis HOM05D007022 ORTHO05D008868 1.4e-40 170.2 161 60.9
Migut.B00344 Erythranthe guttata HOM05D007022 ORTHO05D008868 1.4e-40 170.2 171 51.5
Dinv42154 Davidia involucrata HOM05D007022 ORTHO05D008868 3.1e-40 169.1 160 54.4
MSTRG.27723 Avicennia marina HOM05D007022 ORTHO05D008868 9.2e-40 167.5 150 56.0
PSO541G2619 Papaver somniferum HOM05D007022 ORTHO05D008868 9.2e-40 167.5 118 74.6
Solyc01g108200.3 Solanum lycopersicum HOM05D007022 ORTHO05D008868 9.2e-40 167.5 117 64.1
Sopen01g050430 Solanum pennellii HOM05D007022 ORTHO05D008868 9.2e-40 167.5 117 64.1
unitig_26.g10239 Utricularia gibba HOM05D007022 ORTHO05D008868 2.7e-39 166.0 131 60.3
Oeu007283.1 Olea europaea HOM05D007022 ORTHO05D008868 1.3e-38 163.7 130 60.0
Ah.01g019040 Amaranthus hybridus HOM05D007022 ORTHO05D008868 3.9e-38 162.2 175 56.0
Thhalv10021599m.g Eutrema salsugineum HOM05D007022 ORTHO05D008868 3.9e-38 162.2 123 62.6
BcaB06g25978 Brassica carinata HOM05D007022 ORTHO05D008868 1.9e-37 159.8 131 61.1
AL3G32600 Arabidopsis lyrata HOM05D007022 ORTHO05D008868 4.3e-37 158.7 143 56.6
AT3G19220 Arabidopsis thaliana HOM05D007022 ORTHO05D008868 4.3e-37 158.7 143 56.6
Sp3g17290 Schrenkiella parvula HOM05D007022 ORTHO05D008868 4.3e-37 158.7 124 62.1
THA.LOC104798819 Tarenaya hassleriana HOM05D007022 ORTHO05D008868 5.6e-37 158.3 95 74.7
Aa31LG8G6010 Aethionema arabicum HOM05D007022 ORTHO05D008868 7.3e-37 157.9 119 63.9
Lj9A358T46 Lonicera japonica HOM05D007022 ORTHO05D008868 6.1e-36 154.8 141 58.2
FAN15G0654 Fragaria x ananassa HOM05D007022 ORTHO05D008868 2.3e-35 152.9 143 53.8
BcaC05g28522 Brassica carinata HOM05D007022 ORTHO05D008868 6.8e-35 151.4 126 59.5
A05p30420 Brassica napus HOM05D007022 ORTHO05D008868 6.8e-35 151.4 126 59.5
BraA05t21880Z Brassica rapa HOM05D007022 ORTHO05D008868 6.8e-35 151.4 126 59.5
FAN24G2553 Fragaria x ananassa HOM05D007022 ORTHO05D008868 6.8e-35 151.4 143 53.1
BolC5t33329H Brassica oleracea HOM05D007022 ORTHO05D008868 8.9e-35 151.0 126 57.9
Carub.0003s1905 Capsella rubella HOM05D007022 ORTHO05D008868 1.2e-34 150.6 124 58.1
Sc08g0000700 Simmondsia chinensis HOM05D005091 ORTHO05D006047 1.2e-34 150.6 86 73.3
FAN20G2768 Fragaria x ananassa HOM05D007022 ORTHO05D008868 1.5e-34 150.2 148 52.7
PGSC0003DMG401025892 Solanum tuberosum HOM05D007022 ORTHO05D008868 2.6e-34 149.4 86 73.3
EL10Ac9g21683 Beta vulgaris HOM05D007022 ORTHO05D008868 5.8e-34 148.3 153 50.3
Actinidia00443 Actinidia chinensis HOM05D007022 ORTHO05D008868 9.8e-34 147.5 147 53.1
Sopen10g021420 Solanum pennellii HOM05D007022 ORTHO05D008868 9.8e-34 147.5 99 65.7
AUR62016784 Chenopodium quinoa HOM05D007022 ORTHO05D008868 2.9e-33 146.0 107 70.1
HPP92_016383 Vanilla planifolia HOM05D002198 ORTHO05D008868 4.1e-32 142.1 145 48.3
Oeu013707.1 Olea europaea HOM05D007022 ORTHO05D008868 3.9e-30 135.6 86 68.6
Zm00001eb100830 Zea mays HOM05D007022 ORTHO05D008868 1.9e-29 133.3 151 41.7
ATR0100G054 Amborella trichopoda HOM05D007022 ORTHO05D008868 2.5e-29 132.9 103 59.2
Nitab4.5_0012979g0010 Nicotiana tabacum HOM05D007022 ORTHO05D008868 7.3e-29 131.3 90 65.6
CDE03G0325 Ceratophyllum demersum HOM05D007022 ORTHO05D008868 3.6e-28 129.0 78 73.1
Nitab4.5_0005758g0030 Nicotiana tabacum HOM05D007022 ORTHO05D008868 4.7e-28 128.6 90 63.3
Os09g0458400 Oryza sativa ssp. japonica HOM05D007022 ORTHO05D008868 6.4e-25 118.2 127 45.7
CBR_g29933 Chara braunii HOM05D007022 ORTHO05D008868 4.1e-24 115.5 125 48.0
AagrBONN_evm.TU.Sc2ySwM_368.1030 Anthoceros agrestis HOM05D007022 ORTHO05D008868 4.6e-23 112.1 105 44.8
Pp3c1_42880 Physcomitrium patens HOM05D007022 ORTHO05D008868 2.1e-20 103.2 116 44.8
SMO232G0067 Selaginella moellendorffii HOM05D007022 ORTHO05D008868 2.1e-20 103.2 81 54.3
Sopen10g021450 Solanum pennellii HOM05D007022 ORTHO05D008868 2.8e-20 102.8 124 44.4
Sabra09G0078400 Salix brachista HOM05D007022 ORTHO05D008868 8.9e-19 97.8 141 44.0
SEGI_10031 Sequoiadendron giganteum HOM05D007022 ORTHO05D008868 2.6e-18 96.3 65 83.1
Pp3c2_400 Physcomitrium patens HOM05D007022 ORTHO05D008868 3.4e-18 95.9 147 37.4
Cfa004517 Carpinus fangiana HOM05D007022 ORTHO05D008868 4.9e-17 92.0 132 43.2
Mapoly0186s0009 Marchantia polymorpha HOM05D007022 ORTHO05D008868 2.4e-16 89.7 89 47.2
Rhsim11G0166200 Rhododendron simsii HOM05D007022 ORTHO05D008868 7.8e-15 84.7 72 58.3
PGSC0003DMG400006210 Solanum tuberosum HOM05D007022 ORTHO05D008868 4.3e-13 79.0 68 52.9
DCAR_022028 Daucus carota HOM05D007022 ORTHO05D008868 3.1e-11 72.8 109 41.3
CARHR094630 Cardamine hirsuta HOM05D007022 ORTHO05D008868 8.9e-11 71.2 75 45.3
ECA240G0576 Erigeron canadensis HOM05D007022 ORTHO05D008868 4.9e-09 65.5 61 49.2


User provided reference genes

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